Structure based on 2cek

Ideal structure
Name: n-[8-(1,2,3,4-tetrahydroacridin-9-ylthio)octyl]-1,2,3,4-tetrahydroacridin-9-amine
Formula: C34 H41 N3 S
Weight: 523.774
SMILES: "C(CCCCSc1c2CCCCc2nc3ccccc13)CCCNc4c5CCCCc5nc6ccccc46"
Spacial conformation based on PDB 2cek
RESIDUE   N8T     79
CONECT      CBD    4 CBE  CBC  HBD1 HBD2
CONECT      CBE    4 CBD  CAQ  HBE1 HBE2
CONECT      CAQ    4 CBE  CAP  HAQ1 HAQ2
CONECT      CAP    4 CAQ  CAO  HAP1 HAP2
CONECT      CAO    3 CAP  CBC  CAN 
CONECT      CBC    3 CBD  CAO  NBB 
CONECT      NBB    2 CBC  CBA 
CONECT      CBA    3 NBB  CAZ  CAM 
CONECT      CAZ    3 CBA  CAY  HAZ 
CONECT      CAY    3 CAZ  CAK  HAY 
CONECT      CAK    3 CAY  CAL  HAK 
CONECT      CAL    3 CAK  CAM  HAL 
CONECT      CAM    3 CBA  CAL  CAN 
CONECT      CAN    3 CAO  CAM  NAA 
CONECT      NAA    3 CAN  CAB  HAA 
CONECT      CAB    4 NAA  CAC  HAB1 HAB2
CONECT      CAC    4 CAB  CAD  HAC1 HAC2
CONECT      CAD    4 CAC  CAE  HAD1 HAD2
CONECT      CAE    4 CAD  CAF  HAE1 HAE2
CONECT      CAF    4 CAE  CAG  HAF1 HAF2
CONECT      CAG    4 CAF  CAH  HAG1 HAG2
CONECT      CAH    4 CAG  CAI  HAH1 HAH2
CONECT      CAI    4 CAH  SAJ  HAI1 HAI2
CONECT      SAJ    2 CAI  CAU 
CONECT      CAU    3 SAJ  CAV  CAT 
CONECT      CAV    3 CAU  CAW  CBJ 
CONECT      CAW    4 CAV  CAX  HAW1 HAW2
CONECT      CAX    4 CAW  CBL  HAX1 HAX2
CONECT      CBL    4 CAX  CBK  HBL1 HBL2
CONECT      CBK    4 CBL  CBJ  HBK1 HBK2
CONECT      CBJ    3 CAV  CBK  NBI 
CONECT      NBI    2 CBJ  CBH 
CONECT      CBH    3 NBI  CAT  CBG 
CONECT      CAT    3 CAU  CBH  CAS 
CONECT      CAS    3 CAT  CAR  HAS 
CONECT      CAR    3 CAS  CBF  HAR 
CONECT      CBF    3 CAR  CBG  HBF 
CONECT      CBG    3 CBH  CBF  HBG 
CONECT      HBD1   1 CBD 
CONECT      HBD2   1 CBD 
CONECT      HBE1   1 CBE 
CONECT      HBE2   1 CBE 
CONECT      HAQ1   1 CAQ 
CONECT      HAQ2   1 CAQ 
CONECT      HAP1   1 CAP 
CONECT      HAP2   1 CAP 
CONECT      HAZ    1 CAZ 
CONECT      HAY    1 CAY 
CONECT      HAK    1 CAK 
CONECT      HAL    1 CAL 
CONECT      HAA    1 NAA 
CONECT      HAB1   1 CAB 
CONECT      HAB2   1 CAB 
CONECT      HAC1   1 CAC 
CONECT      HAC2   1 CAC 
CONECT      HAD1   1 CAD 
CONECT      HAD2   1 CAD 
CONECT      HAE1   1 CAE 
CONECT      HAE2   1 CAE 
CONECT      HAF1   1 CAF 
CONECT      HAF2   1 CAF 
CONECT      HAG1   1 CAG 
CONECT      HAG2   1 CAG 
CONECT      HAH1   1 CAH 
CONECT      HAH2   1 CAH 
CONECT      HAI1   1 CAI 
CONECT      HAI2   1 CAI 
CONECT      HAW1   1 CAW 
CONECT      HAW2   1 CAW 
CONECT      HAX1   1 CAX 
CONECT      HAX2   1 CAX 
CONECT      HBL1   1 CBL 
CONECT      HBL2   1 CBL 
CONECT      HBK1   1 CBK 
CONECT      HBK2   1 CBK 
CONECT      HAS    1 CAS 
CONECT      HAR    1 CAR 
CONECT      HBF    1 CBF 
CONECT      HBG    1 CBG 
END   
HET    N8T             79
HETSYN     N8T N-(1,2,3,4-TETRAHYDROACRIDIN-9-YL)-8-[(1,2,3,4-TETRAHYD
HETSYN   2 N8T ROACRIDIN-9-YL)THIO]-O CTAN-1-AMINE
HETNAM     N8T N-[8-(1,2,3,4-TETRAHYDROACRIDIN-9-YLTHIO)OCTYL]-1,2,3,4
HETNAM   2 N8T -TETRAHYDROACRIDIN-9-AMINE
FORMUL      N8T    C34 H41 N3 S1

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uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science