Structure based on 1ag3 | Ideal structure |
|
Name: 2'-deoxy-n1,n2-propano guanosine monophosphate |
Formula: C13 H18 N5 O7 P |
Weight: 387.285 |
SMILES: "O[CH]1C[CH](O[CH]1CO[P](O)(O)=O)n2cnc3C(=O)N4CCCNC4=Nc23" |
Spacial conformation based on PDB
1ag3. Also present in other
7 PDB entries. |
RESIDUE P 44
CONECT P 4 OP1 OP2 OP3 O5'
CONECT OP1 1 P
CONECT OP2 2 P HOP2
CONECT OP3 2 P HOP3
CONECT O5' 2 P C5'
CONECT C5' 4 O5' C4' H5' H5''
CONECT C4' 4 C5' O4' C3' H4'
CONECT O4' 2 C4' C1'
CONECT C3' 4 C4' O3' C2' H3'
CONECT O3' 2 C3' HO3'
CONECT C2' 4 C3' C1' H2' H2''
CONECT C1' 4 O4' C2' N9 H1'
CONECT N9 3 C1' C8 C4
CONECT C8 3 N9 N7 H8
CONECT N7 2 C8 C5
CONECT C5 3 N7 C6 C4
CONECT C6 3 C5 O6 N1
CONECT O6 1 C6
CONECT N1 3 C6 C2 C8A
CONECT C2 3 N1 N2 N3
CONECT N2 3 C2 C6A H2
CONECT N3 2 C2 C4
CONECT C4 3 N9 C5 N3
CONECT C6A 4 N2 C7A H6A1 H6A2
CONECT C7A 4 C6A C8A H7A1 H7A2
CONECT C8A 4 N1 C7A H8A1 H8A2
CONECT HOP2 1 OP2
CONECT HOP3 1 OP3
CONECT H5' 1 C5'
CONECT H5'' 1 C5'
CONECT H4' 1 C4'
CONECT H3' 1 C3'
CONECT HO3' 1 O3'
CONECT H2' 1 C2'
CONECT H2'' 1 C2'
CONECT H1' 1 C1'
CONECT H8 1 C8
CONECT H2 1 N2
CONECT H6A1 1 C6A
CONECT H6A2 1 C6A
CONECT H7A1 1 C7A
CONECT H7A2 1 C7A
CONECT H8A1 1 C8A
CONECT H8A2 1 C8A
END
HET P 44
HETNAM P 2'-DEOXY-N1,N2-PROPANO GUANOSINE MONOPHOSPHATE
FORMUL P C13 H18 N5 O7 P1