Structure based on 1cl8

Ideal structure
Name: purine 2'-deoxyribo-5'-monophosphate
Formula: C10 H13 N4 O6 P
Weight: 316.207
SMILES: "O[CH]1C[CH](O[CH]1CO[P](O)(O)=O)n2cnc3cncnc23"
Spacial conformation based on PDB 1cl8.
Also present on 1u1l, 1u1n
RESIDUE   PRN     34
CONECT      N1     2 C2   C6  
CONECT      C2     3 N1   N3   H2  
CONECT      N3     2 C2   C4  
CONECT      C4     3 N3   C5   N9  
CONECT      C5     3 C4   C6   N7  
CONECT      C6     3 N1   C5   H6  
CONECT      N7     2 C5   C8  
CONECT      C8     3 N7   N9   H8  
CONECT      N9     3 C4   C8   C1' 
CONECT      C1'    4 N9   C2'  O4'  H1' 
CONECT      C2'    4 C1'  C3'  H2'  H2''
CONECT      C3'    4 C2'  O3'  C4'  H3' 
CONECT      O3'    2 C3'  HO3'
CONECT      C4'    4 C3'  O4'  C5'  H4' 
CONECT      O4'    2 C1'  C4' 
CONECT      C5'    4 C4'  O5'  H5'  H5''
CONECT      O5'    2 C5'  P   
CONECT      P      4 O5'  OP1  OP2  OP3 
CONECT      OP1    1 P   
CONECT      OP2    2 P    HOP2
CONECT      OP3    2 P    HOP3
CONECT      H2     1 C2  
CONECT      H6     1 C6  
CONECT      H8     1 C8  
CONECT      H1'    1 C1' 
CONECT      H2'    1 C2' 
CONECT      H2''   1 C2' 
CONECT      H3'    1 C3' 
CONECT      HO3'   1 O3' 
CONECT      H4'    1 C4' 
CONECT      H5'    1 C5' 
CONECT      H5''   1 C5' 
CONECT      HOP2   1 OP2 
CONECT      HOP3   1 OP3 
END   
HET    PRN             34
HETNAM     PRN PURINE 2'-DEOXYRIBO-5'-MONOPHOSPHATE
FORMUL      PRN    C10 H13 N4 O6 P1

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science