Structure based on 4dx4

Ideal structure
Name: (11,12-dimethyldipyrido[3,2-a:2',3'-c]phenazine-kappa~2~n~4~,n~5~)[bis(pyrazino[2,3-f]quinoxaline-kappa~2~n~1~,n~10~)]ruthenium(2+)
Formula: C40 H26 N12 Ru
Weight: 775.785
SMILES: "[Ru++]|1|2|3(|n4cccc5c4c6n|1cccc6c7nc8cc(C)c(C)cc8nc57)(|n9ccnc%10ccc%11nccn|2c%11c9%10)|n%12ccnc%13ccc%14nccn|3c%14c%12%13"
Spacial conformation based on PDB 4dx4.
Also present in other 5 PDB entries.
RESIDUE   RML     79
CONECT      C53    4 C17  H1   H2   H3  
CONECT      C17    3 C53  C18  C16 
CONECT      C18    3 C17  C52  C14 
CONECT      C52    4 C18  H4   H5   H6  
CONECT      C14    3 C18  C13  H7  
CONECT      C16    3 C17  C15  H8  
CONECT      C15    3 C16  N3   C13 
CONECT      N3     2 C15  C6  
CONECT      C13    3 C14  C15  N4  
CONECT      N4     2 C13  C7  
CONECT      C7     3 N4   C6   C8  
CONECT      C6     3 N3   C7   C5  
CONECT      C5     3 C6   C4   C1  
CONECT      C4     3 C5   C3   H9  
CONECT      C3     3 C4   C2   H10 
CONECT      C2     3 C3   N2   H11 
CONECT      C8     3 C7   C10  C9  
CONECT      C10    3 C8   C1   N1  
CONECT      C1     3 C5   C10  N2  
CONECT      N2     3 C2   C1   RU  
CONECT      N1     3 C10  C12  RU  
CONECT      C12    3 N1   C11  H12 
CONECT      C11    3 C12  C9   H13 
CONECT      C9     3 C8   C11  H14 
CONECT      N8     3 RU   C28  C26 
CONECT      C28    3 N8   C27  H15 
CONECT      C27    3 C28  N7   H16 
CONECT      N7     2 C27  C25 
CONECT      C26    3 N8   C25  C19 
CONECT      C25    3 N7   C26  C24 
CONECT      C24    3 C25  C23  H17 
CONECT      C23    3 C24  C22  H18 
CONECT      C22    3 C23  N6   C19 
CONECT      N6     2 C22  C21 
CONECT      C19    3 C26  C22  N5  
CONECT      N5     3 RU   C19  C20 
CONECT      C20    3 N5   C21  H19 
CONECT      C21    3 N6   C20  H20 
CONECT      N12    3 RU   C38  C36 
CONECT      C38    3 N12  C37  H21 
CONECT      C37    3 C38  N11  H22 
CONECT      N11    2 C37  C35 
CONECT      C36    3 N12  C29  C35 
CONECT      C29    3 C36  N9   C32 
CONECT      N9     3 RU   C29  C30 
CONECT      C30    3 N9   C31  H23 
CONECT      C31    3 C30  N10  H24 
CONECT      C35    3 N11  C36  C34 
CONECT      C34    3 C35  C33  H25 
CONECT      C33    3 C34  C32  H26 
CONECT      C32    3 C29  C33  N10 
CONECT      N10    2 C31  C32 
CONECT      H1     1 C53 
CONECT      H2     1 C53 
CONECT      H3     1 C53 
CONECT      H4     1 C52 
CONECT      H5     1 C52 
CONECT      H6     1 C52 
CONECT      H7     1 C14 
CONECT      H8     1 C16 
CONECT      H9     1 C4  
CONECT      H10    1 C3  
CONECT      H11    1 C2  
CONECT      H12    1 C12 
CONECT      H13    1 C11 
CONECT      H14    1 C9  
CONECT      H15    1 C28 
CONECT      H16    1 C27 
CONECT      H17    1 C24 
CONECT      H18    1 C23 
CONECT      H19    1 C20 
CONECT      H20    1 C21 
CONECT      H21    1 C38 
CONECT      H22    1 C37 
CONECT      H23    1 C30 
CONECT      H24    1 C31 
CONECT      H25    1 C34 
CONECT      H26    1 C33 
END   
HET    RML             79
HETSYN     RML Lambda-[Ru(1,4,5,8-tetraazaphenanthrene)2(11,12-dimethy
HETSYN   2 RML l-dipyridophenazine)]2+
HETNAM     RML (11,12-dimethyldipyrido[3,2-a:2',3'-c]phenazine-kappa~2
HETNAM   2 RML ~N~4~,N~5~)[bis(pyrazino[2,3-f]quinoxaline-kappa~2~N~1~
HETNAM   3 RML ,N~10~)]ruthenium(2+)
FORMUL      RML    C40 H26 N12 Ru1 2+

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science