Structure based on 3nyn

Ideal structure
Name: sangivamycin
Formula: C12 H15 N5 O5
Weight: 309.278
SMILES: "NC(=O)c1cn([CH]2O[CH](CO)[CH](O)[CH]2O)c3ncnc(N)c13"
Spacial conformation based on PDB 3nyn.
Also present in other 11 PDB entries.
RESIDUE   SGV     37
CONECT      N1     2 C2   C6  
CONECT      C2     3 N1   N3   H2  
CONECT      N3     2 C2   C4  
CONECT      C4     3 N3   C5   N9  
CONECT      C5     3 C4   C6   C7  
CONECT      C6     3 N1   C5   N6  
CONECT      N6     3 C6   HN6  HN6A
CONECT      C7     3 C5   C8   C10 
CONECT      C8     3 C7   N9   H8  
CONECT      N9     3 C4   C8   C1' 
CONECT      C1'    4 N9   C2'  O4'  H1' 
CONECT      C10    3 C7   N11  O12 
CONECT      N11    3 C10  HN11 HN1A
CONECT      O12    1 C10 
CONECT      C2'    4 C1'  O2'  C3'  H2' 
CONECT      O2'    2 C2'  HO2'
CONECT      C3'    4 C2'  O3'  C4'  H3' 
CONECT      O3'    2 C3'  HO3'
CONECT      C4'    4 C3'  O4'  C5'  H4' 
CONECT      O4'    2 C1'  C4' 
CONECT      C5'    4 C4'  O5'  H5'  H5'A
CONECT      O5'    2 C5'  HO5'
CONECT      H2     1 C2  
CONECT      HN6    1 N6  
CONECT      HN6A   1 N6  
CONECT      H8     1 C8  
CONECT      H1'    1 C1' 
CONECT      HN11   1 N11 
CONECT      HN1A   1 N11 
CONECT      H2'    1 C2' 
CONECT      HO2'   1 O2' 
CONECT      H3'    1 C3' 
CONECT      HO3'   1 O3' 
CONECT      H4'    1 C4' 
CONECT      H5'    1 C5' 
CONECT      H5'A   1 C5' 
CONECT      HO5'   1 O5' 
END   
HET    SGV             37
HETSYN     SGV 4-amino-7-beta-D-ribofuranosyl-7H-pyrrolo[2,3-d]pyrimid
HETSYN   2 SGV ine-5-carboxamide
HETNAM     SGV SANGIVAMYCIN
FORMUL      SGV    C12 H15 N5 O5

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science