Structure based on 1j2z

Ideal structure
Name: 2-hydroxymethyl-6-octylsulfanyl-tetrahydro-pyran-3,4,5-triol
Formula: C14 H28 O5 S
Weight: 308.434
SMILES: "CCCCCCCCS[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O"
Spacial conformation based on PDB 1j2z.
Also present in other 32 PDB entries.
RESIDUE   SOG     48
CONECT      C1     4 C2   S1   O5   H1  
CONECT      C2     4 C1   C3   O2   H2  
CONECT      C3     4 C2   C4   O3   H3  
CONECT      C4     4 C3   C5   O4   H4  
CONECT      C5     4 C4   C6   O5   H5  
CONECT      C6     4 C5   O6   H61  H62 
CONECT      C1'    4 C2'  S1   H1'1 H1'2
CONECT      C2'    4 C1'  C3'  H2'1 H2'2
CONECT      C3'    4 C2'  C4'  H3'1 H3'2
CONECT      C4'    4 C3'  C5'  H4'1 H4'2
CONECT      C5'    4 C4'  C6'  H5'1 H5'2
CONECT      C6'    4 C5'  C7'  H6'1 H6'2
CONECT      C7'    4 C6'  C8'  H7'1 H7'2
CONECT      C8'    4 C7'  H8'1 H8'2 H8'3
CONECT      S1     2 C1   C1' 
CONECT      O2     2 C2   HO2 
CONECT      O3     2 C3   HO3 
CONECT      O4     2 C4   HO4 
CONECT      O5     2 C1   C5  
CONECT      O6     2 C6   HO6 
CONECT      H1     1 C1  
CONECT      H2     1 C2  
CONECT      H3     1 C3  
CONECT      H4     1 C4  
CONECT      H5     1 C5  
CONECT      H61    1 C6  
CONECT      H62    1 C6  
CONECT      H1'1   1 C1' 
CONECT      H1'2   1 C1' 
CONECT      H2'1   1 C2' 
CONECT      H2'2   1 C2' 
CONECT      H3'1   1 C3' 
CONECT      H3'2   1 C3' 
CONECT      H4'1   1 C4' 
CONECT      H4'2   1 C4' 
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      H6'1   1 C6' 
CONECT      H6'2   1 C6' 
CONECT      H7'1   1 C7' 
CONECT      H7'2   1 C7' 
CONECT      H8'1   1 C8' 
CONECT      H8'2   1 C8' 
CONECT      H8'3   1 C8' 
CONECT      HO2    1 O2  
CONECT      HO3    1 O3  
CONECT      HO4    1 O4  
CONECT      HO6    1 O6  
END   
HET    SOG             48
HETSYN     SOG 2-HYDROXYMETHYL-6-OCTYLSULFANYL-TETRAHYDRO-PYRAN-3,4,5-
HETSYN   2 SOG TRIOL; 1-S-OCTYL-BETA-D-THIOGLUCOSIDE; octyl 1-thio-bet
HETSYN   3 SOG a-D-glucoside; octyl 1-thio-D-glucoside; octyl 1-thio-g
HETSYN   4 SOG lucoside
HETNAM     SOG octyl 1-thio-beta-D-glucopyranoside
FORMUL      SOG    C14 H28 O5 S1

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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science