Structure based on 1q90

Ideal structure
Name: 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol
Formula: C41 H78 O12 S
Weight: 795.116
SMILES: "CCCCCCCCCCCCCCCC(=O)OC[CH](CO[CH]1O[CH](C[S](O)(=O)=O)[CH](O)[CH](O)[CH]1O)OC(=O)CCCCCCCCCCCCCCC"
Spacial conformation based on PDB 1q90.
Also present in other 86 PDB entries.
RESIDUE   SQD    132
CONECT      O6     2 C44  C1  
CONECT      C44    4 O6   C45  H441 H442
CONECT      C45    4 C44  C46  O47  H45 
CONECT      C46    4 C45  O48  H461 H462
CONECT      O47    2 C45  C7  
CONECT      C7     3 O47  O49  C8  
CONECT      O49    1 C7  
CONECT      C8     4 C7   C9   H81  H82 
CONECT      C9     4 C8   C10  H91  H92 
CONECT      C10    4 C9   C11  H101 H102
CONECT      C11    4 C10  C12  H111 H112
CONECT      C12    4 C11  C13  H121 H122
CONECT      C13    4 C12  C14  H131 H132
CONECT      C14    4 C13  C15  H141 H142
CONECT      C15    4 C14  C16  H151 H152
CONECT      C16    4 C15  C17  H161 H162
CONECT      C17    4 C16  C18  H171 H172
CONECT      C18    4 C17  C19  H181 H182
CONECT      C19    4 C18  C20  H191 H192
CONECT      C20    4 C19  C21  H201 H202
CONECT      C21    4 C20  C22  H211 H212
CONECT      C22    4 C21  H221 H222 H223
CONECT      O48    2 C46  C23 
CONECT      C23    3 O48  O10  C24 
CONECT      O10    1 C23 
CONECT      C24    4 C23  C25  H241 H242
CONECT      C25    4 C24  C26  H251 H252
CONECT      C26    4 C25  C27  H261 H262
CONECT      C27    4 C26  C28  H271 H272
CONECT      C28    4 C27  C29  H281 H282
CONECT      C29    4 C28  C30  H291 H292
CONECT      C30    4 C29  C31  H301 H302
CONECT      C31    4 C30  C32  H311 H312
CONECT      C32    4 C31  C33  H321 H322
CONECT      C33    4 C32  C34  H331 H332
CONECT      C34    4 C33  C35  H341 H342
CONECT      C35    4 C34  C36  H351 H352
CONECT      C36    4 C35  C37  H361 H362
CONECT      C37    4 C36  C38  H371 H372
CONECT      C38    4 C37  H381 H382 H383
CONECT      C1     4 O6   C2   O5   H1  
CONECT      C2     4 C1   O2   C3   H2  
CONECT      O2     2 C2   HO2 
CONECT      C3     4 C2   O3   C4   H3  
CONECT      O3     2 C3   HO3 
CONECT      C4     4 C3   O4   C5   H4  
CONECT      O4     2 C4   HO4 
CONECT      C5     4 C4   C6   O5   H5  
CONECT      C6     4 C5   S    H61  H62 
CONECT      O5     2 C1   C5  
CONECT      S      4 C6   O7   O8   O9  
CONECT      O7     1 S   
CONECT      O8     2 S    HO8 
CONECT      O9     1 S   
CONECT      H441   1 C44 
CONECT      H442   1 C44 
CONECT      H45    1 C45 
CONECT      H461   1 C46 
CONECT      H462   1 C46 
CONECT      H81    1 C8  
CONECT      H82    1 C8  
CONECT      H91    1 C9  
CONECT      H92    1 C9  
CONECT      H101   1 C10 
CONECT      H102   1 C10 
CONECT      H111   1 C11 
CONECT      H112   1 C11 
CONECT      H121   1 C12 
CONECT      H122   1 C12 
CONECT      H131   1 C13 
CONECT      H132   1 C13 
CONECT      H141   1 C14 
CONECT      H142   1 C14 
CONECT      H151   1 C15 
CONECT      H152   1 C15 
CONECT      H161   1 C16 
CONECT      H162   1 C16 
CONECT      H171   1 C17 
CONECT      H172   1 C17 
CONECT      H181   1 C18 
CONECT      H182   1 C18 
CONECT      H191   1 C19 
CONECT      H192   1 C19 
CONECT      H201   1 C20 
CONECT      H202   1 C20 
CONECT      H211   1 C21 
CONECT      H212   1 C21 
CONECT      H221   1 C22 
CONECT      H222   1 C22 
CONECT      H223   1 C22 
CONECT      H241   1 C24 
CONECT      H242   1 C24 
CONECT      H251   1 C25 
CONECT      H252   1 C25 
CONECT      H261   1 C26 
CONECT      H262   1 C26 
CONECT      H271   1 C27 
CONECT      H272   1 C27 
CONECT      H281   1 C28 
CONECT      H282   1 C28 
CONECT      H291   1 C29 
CONECT      H292   1 C29 
CONECT      H301   1 C30 
CONECT      H302   1 C30 
CONECT      H311   1 C31 
CONECT      H312   1 C31 
CONECT      H321   1 C32 
CONECT      H322   1 C32 
CONECT      H331   1 C33 
CONECT      H332   1 C33 
CONECT      H341   1 C34 
CONECT      H342   1 C34 
CONECT      H351   1 C35 
CONECT      H352   1 C35 
CONECT      H361   1 C36 
CONECT      H362   1 C36 
CONECT      H371   1 C37 
CONECT      H372   1 C37 
CONECT      H381   1 C38 
CONECT      H382   1 C38 
CONECT      H383   1 C38 
CONECT      H1     1 C1  
CONECT      H2     1 C2  
CONECT      HO2    1 O2  
CONECT      H3     1 C3  
CONECT      HO3    1 O3  
CONECT      H4     1 C4  
CONECT      HO4    1 O4  
CONECT      H5     1 C5  
CONECT      H61    1 C6  
CONECT      H62    1 C6  
CONECT      HO8    1 O8  
END   
HET    SQD            132
HETSYN     SQD SULFOQUINOVOSYLDIACYLGLYCEROL
HETNAM     SQD 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOS
HETNAM   2 SQD YL]-SN-GLYCEROL
FORMUL      SQD    C41 H78 O12 S1

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