Structure based on 2apc | Ideal structure |
|
Name: uridine-diphosphate-methylene-n-acetyl-glucosamine |
Formula: C18 H29 N3 O16 P2 |
Weight: 605.381 |
SMILES: "CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1C[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)N3C=CC(=O)NC3=O" |
Spacial conformation based on PDB
2apc. Also present on 2jlb |
RESIDUE UDM 68
CONECT C1' 4 C2' CB O5' H1'
CONECT C2' 4 C1' C3' N2' H2'
CONECT C3' 4 C2' C4' O3' H3'
CONECT C4' 4 C3' C5' O4' H4'
CONECT C5' 4 C4' C6' O5' H5'
CONECT C6' 4 C5' O6' H6'1 H6'2
CONECT C7' 3 C8' N2' O7'
CONECT C8' 4 C7' H8'1 H8'2 H8'3
CONECT N2' 3 C2' C7' H3
CONECT CB 4 C1' PB HB1 HB2
CONECT O3' 2 C3' H4
CONECT O4' 2 C4' H7
CONECT O5' 2 C1' C5'
CONECT O6' 2 C6' H6'
CONECT O7' 1 C7'
CONECT N1 3 C2 C6 C1D
CONECT C2 3 N1 N3 O2
CONECT N3 3 C2 C4 HN3
CONECT C4 3 N3 C5 O4
CONECT C5 3 C4 C6 H5
CONECT C6 3 N1 C5 H6
CONECT O2 1 C2
CONECT O4 1 C4
CONECT C1D 4 N1 C2D O4D H1D
CONECT C2D 4 C1D O2' C3D H2D
CONECT O2' 2 C2D H1
CONECT C3D 4 C2D C4D O3D H3D
CONECT C4D 4 C3D O4D C5D H4D
CONECT O4D 2 C1D C4D
CONECT O3D 2 C3D H2
CONECT C5D 4 C4D O5D H5'1 H5'2
CONECT O5D 2 C5D PA
CONECT PA 4 O5D O1A O2A O3A
CONECT O1A 1 PA
CONECT O2A 2 PA H2A
CONECT O3A 2 PA PB
CONECT PB 4 CB O3A O1B O2B
CONECT O1B 1 PB
CONECT O2B 2 PB H2B
CONECT H1' 1 C1'
CONECT H2' 1 C2'
CONECT H3' 1 C3'
CONECT H4' 1 C4'
CONECT H5' 1 C5'
CONECT H6'1 1 C6'
CONECT H6'2 1 C6'
CONECT H8'1 1 C8'
CONECT H8'2 1 C8'
CONECT H8'3 1 C8'
CONECT H3 1 N2'
CONECT HB1 1 CB
CONECT HB2 1 CB
CONECT H4 1 O3'
CONECT H7 1 O4'
CONECT H6' 1 O6'
CONECT HN3 1 N3
CONECT H5 1 C5
CONECT H6 1 C6
CONECT H1D 1 C1D
CONECT H2D 1 C2D
CONECT H1 1 O2'
CONECT H3D 1 C3D
CONECT H4D 1 C4D
CONECT H2 1 O3D
CONECT H5'1 1 C5D
CONECT H5'2 1 C5D
CONECT H2A 1 O2A
CONECT H2B 1 O2B
END
HET UDM 68
HETSYN UDM ((2S,3R,4R,5S,6R)-3-ACETAMIDO-4,5-DIHYDROXY-6-(HYDROXYM
HETSYN 2 UDM ETHYL)-TETRAHYDRO-2H-PYRAN-2-YL)METHYLPHOSPHONIC (((2R,
HETSYN 3 UDM 3S,4R,5R)-5-(2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)-3
HETSYN 4 UDM ,4-DIHYDROXY-TETRAHYDROFURAN-2-YL)METHYL PHOSPHORIC) AN
HETSYN 5 UDM HYDRIDE
HETNAM UDM URIDINE-DIPHOSPHATE-METHYLENE-N-ACETYL-GLUCOSAMINE
FORMUL UDM C18 H29 N3 O16 P2