Structure based on 3ufj

Ideal structure
Name: 1-(2-deoxy-2-fluoro-5-o-phosphono-beta-d-arabinofuranosyl)pyrimidine-2,4(1h,3h)-dione
Formula: C9 H12 F N2 O8 P
Weight: 326.172
SMILES: "O[CH]1[CH](F)[CH](O[CH]1CO[P](O)(O)=O)N2C=CC(=O)NC2=O"
Spacial conformation based on PDB 3ufj.
Also present on 5hf7, 5jxy, 6mu4
RESIDUE   UF2     33
CONECT      P      4 O1P  O5'  O2P  O1  
CONECT      O1P    1 P   
CONECT      O5'    2 P    C5' 
CONECT      C5'    4 O5'  C4'  H1   H2  
CONECT      C4'    4 C5'  C3'  O4'  H3  
CONECT      C3'    4 C4'  O3'  C2'  H4  
CONECT      O3'    2 C3'  H5  
CONECT      C2'    4 C3'  F2'  C1'  H6  
CONECT      F2'    1 C2' 
CONECT      C1'    4 C2'  O4'  N1   H7  
CONECT      O4'    2 C4'  C1' 
CONECT      N1     3 C1'  C6   C2  
CONECT      C6     3 N1   C5   H8  
CONECT      C5     3 C6   C4   H9  
CONECT      C4     3 C5   N3   O4  
CONECT      N3     3 C4   C2   H10 
CONECT      C2     3 N1   N3   O2  
CONECT      O2     1 C2  
CONECT      O4     1 C4  
CONECT      O2P    2 P    H11 
CONECT      O1     2 P    H12 
CONECT      H1     1 C5' 
CONECT      H2     1 C5' 
CONECT      H3     1 C4' 
CONECT      H4     1 C3' 
CONECT      H5     1 O3' 
CONECT      H6     1 C2' 
CONECT      H7     1 C1' 
CONECT      H8     1 C6  
CONECT      H9     1 C5  
CONECT      H10    1 N3  
CONECT      H11    1 O2P 
CONECT      H12    1 O1  
HET    UF2             33
HETSYN     UF2 2'-fluoro-2'-deoxyuridine
HETNAM     UF2 1-(2-deoxy-2-fluoro-5-O-phosphono-beta-D-arabinofuranos
HETNAM   2 UF2 yl)pyrimidine-2,4(1H,3H)-dione
FORMUL      UF2    C9 H12 F1 N2 O8 P1

uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science