MONOMER pageuses Jmol, developed by the Jmol Development Team (color reference)
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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014 Bioinformatics Unit Weizmann Institute of Science |
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| Name: 2'-deoxy-5'-o-[(r)-hydroxy{[(r)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]uridine | ||
| Formula: C10 H17 N2 O13 P3 | ||
| Weight: 466.169 | ||
| SMILES: "O[CH]1C[CH](O[CH]1CO[P](O)(=O)C[P](O)(=O)O[P](O)(O)=O)N2C=CC(=O)NC2=O" | ||
| Spacial conformation based on PDB
3spy. Also present on 3spz, 4m28 |
RESIDUE UPC 45
CONECT N1 3 C2 C6 C1'
CONECT C2 3 N1 O2 N3
CONECT O2 1 C2
CONECT N3 3 C2 C4 HN3
CONECT C4 3 N3 O4 C5
CONECT O4 1 C4
CONECT C5 3 C4 C6 H5
CONECT C6 3 N1 C5 H6
CONECT PA 4 O1A O2A C3A O5'
CONECT PB 4 O1B O2B C3A O3B
CONECT PG 4 O1G O2G O3B O3G
CONECT C1' 4 N1 C2' O4' H1'
CONECT O1A 2 PA HO1A
CONECT O1B 2 PB HO1B
CONECT O1G 2 PG HO1G
CONECT C2' 4 C1' C3' H2' H2'A
CONECT O2A 1 PA
CONECT O2B 1 PB
CONECT O2G 1 PG
CONECT C3' 4 C2' O3' C4' H3'
CONECT O3' 2 C3' HO3'
CONECT C3A 4 PA PB H3A H3AA
CONECT O3B 2 PB PG
CONECT O3G 2 PG HO3G
CONECT C4' 4 C3' O4' C5' H4'
CONECT O4' 2 C1' C4'
CONECT C5' 4 C4' O5' H5' H5'A
CONECT O5' 2 PA C5'
CONECT H5 1 C5
CONECT H6 1 C6
CONECT H1' 1 C1'
CONECT HO1A 1 O1A
CONECT HO1B 1 O1B
CONECT HO1G 1 O1G
CONECT H2' 1 C2'
CONECT H2'A 1 C2'
CONECT H3' 1 C3'
CONECT HO3' 1 O3'
CONECT H3A 1 C3A
CONECT H3AA 1 C3A
CONECT HO3G 1 O3G
CONECT H4' 1 C4'
CONECT H5' 1 C5'
CONECT H5'A 1 C5'
CONECT HN3 1 N3
END
HET UPC 45
HETNAM UPC 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)ph
HETNAM 2 UPC osphoryl]methyl}phosphoryl]uridine
FORMUL UPC C10 H17 N2 O13 P3
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This OCA
MONOMER page uses Jmol, developed by the Jmol Development Team (color reference)
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