MONOMER pageuses Jmol, developed by the Jmol Development Team (color reference)
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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014 Bioinformatics Unit Weizmann Institute of Science |
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| Name: 2'-deoxy-5'-o-[(s)-hydroxy{[(s)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine | ||
| Formula: C10 H18 N3 O12 P3 | ||
| Weight: 465.184 | ||
| SMILES: "NC1=NC(=O)N(C=C1)[CH]2C[CH](O)[CH](CO[P](O)(=O)C[P](O)(=O)O[P](O)(O)=O)O2" | ||
| Spacial conformation based on PDB
5v1p. Also present on 5vez, 6go5, 7s9p |
RESIDUE XC5 46
CONECT PA 4 O1A O2A C3A O5'
CONECT O1A 2 PA H1
CONECT O2A 1 PA
CONECT C3A 4 PA PB H2 H3
CONECT PB 4 C3A O1B O2B O3B
CONECT O1B 1 PB
CONECT O2B 2 PB H4
CONECT O3B 2 PB PG
CONECT PG 4 O3B O1G O2G O3G
CONECT O1G 2 PG H5
CONECT O2G 1 PG
CONECT O3G 2 PG H6
CONECT N1 3 C2 C6 C1'
CONECT C2 3 N1 N3 O2
CONECT N3 2 C2 C4
CONECT C4 3 N3 C5 N4
CONECT C5 3 C4 C6 H7
CONECT C6 3 N1 C5 H8
CONECT O2 1 C2
CONECT N4 3 C4 H9 H10
CONECT C1' 4 N1 C2' O4' H11
CONECT C2' 4 C1' C3' H12 H13
CONECT C3' 4 C2' C4' O3' H14
CONECT C4' 4 C3' O4' C5' H15
CONECT O4' 2 C1' C4'
CONECT O5' 2 PA C5'
CONECT C5' 4 C4' O5' H16 H17
CONECT O3' 2 C3' H18
CONECT H1 1 O1A
CONECT H2 1 C3A
CONECT H3 1 C3A
CONECT H4 1 O2B
CONECT H5 1 O1G
CONECT H6 1 O3G
CONECT H7 1 C5
CONECT H8 1 C6
CONECT H9 1 N4
CONECT H10 1 N4
CONECT H11 1 C1'
CONECT H12 1 C2'
CONECT H13 1 C2'
CONECT H14 1 C3'
CONECT H15 1 C4'
CONECT H16 1 C5'
CONECT H17 1 C5'
CONECT H18 1 O3'
END
HET XC5 46
HETNAM XC5 2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)ph
HETNAM 2 XC5 osphoryl]methyl}phosphoryl]cytidine
FORMUL XC5 C10 H18 N3 O12 P3
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This OCA
MONOMER page uses Jmol, developed by the Jmol Development Team (color reference)
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