PDB Short entry for 1A4Y HEADER COMPLEX (INHIBITOR/NUCLEASE) 08-FEB-98 1A4Y TITLE RIBONUCLEASE INHIBITOR-ANGIOGENIN COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBONUCLEASE INHIBITOR; COMPND 3 CHAIN: A, D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANGIOGENIN; COMPND 7 CHAIN: B, E; COMPND 8 EC: 3.1.27.-; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 ORGAN: PLACENTA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI STR. K12 SUBSTR. W3110; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 316407; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: W3110; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PANG2; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 ORGAN: PLACENTA; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI STR. K12 SUBSTR. W3110; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 316407; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: W3110; SOURCE 18 EXPRESSION_SYSTEM_VECTOR: PUC-DERIVED; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PANG2 KEYWDS COMPLEX (INHIBITOR-NUCLEASE), COMPLEX (RI-ANG), HYDROLASE MOLECULAR KEYWDS 2 RECOGNITION, EPITOPE MAPPING, LEUCINE-RICH REPEATS, COMPLEX KEYWDS 3 (INHIBITOR-NUCLEASE) COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.C.PAPAGEORGIOU,K.R.ACHARYA REVDAT 3 02-AUG-23 1A4Y 1 REMARK REVDAT 2 24-FEB-09 1A4Y 1 VERSN REVDAT 1 14-OCT-98 1A4Y 0 JRNL AUTH A.C.PAPAGEORGIOU,R.SHAPIRO,K.R.ACHARYA JRNL TITL MOLECULAR RECOGNITION OF HUMAN ANGIOGENIN BY PLACENTAL JRNL TITL 2 RIBONUCLEASE INHIBITOR--AN X-RAY CRYSTALLOGRAPHIC STUDY AT JRNL TITL 3 2.0 A RESOLUTION. JRNL REF EMBO J. V. 16 5162 1997 JRNL REFN ISSN 0261-4189 JRNL PMID 9311977 JRNL DOI 10.1093/EMBOJ/16.17.5162 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.8 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 86.9 REMARK 3 NUMBER OF REFLECTIONS : 72308 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8806 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 133 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : 0.36 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.600 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 4.200 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 5.300 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 8.300 ; 2.500 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : TOPH19.PEP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1A4Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000170397. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : JUN-96 REMARK 200 TEMPERATURE (KELVIN) : 289 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX9.6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, XDS REMARK 200 DATA SCALING SOFTWARE : XDS, SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72355 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.9 REMARK 200 DATA REDUNDANCY : 2.200 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 4.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 65.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.43600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR 3.8 REMARK 200 STARTING MODEL: 1BNH (PIG RIBONUCLEASE INHIBITOR) REMARK 200 REMARK 200 REMARK: THE POSITION OF ANGIOGENIN WAS LOCATED BY EXAMINATION OF REMARK 200 THE ELECTRON DENSITY MAP REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: THE COMPLEX WAS CRYSTALLIZED FROM 10% REMARK 280 PEG4000, 20MM SODIUM CITRATE (PH 4.2), 0.1 AMMONIUM SULPHATE AND REMARK 280 25 MM DTT. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 52.80250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THERE ARE TWO COMPLEXES IN THE ASYMMETRIC UNIT REMARK 300 (CHAINS A, B, C AND D, E, F). CHAINS A AND D CORRESPOND REMARK 300 TO THE INHIBITOR, CHAINS B AND E CORRESPOND TO ANGIOGENIN, REMARK 300 AND CHAINS C AND F CORRESPOND TO THE WATER MOLECULES REMARK 300 ASSOCIATED WITH THE RESPECTIVE COMPLEX. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 22 CG CD1 CD2 REMARK 470 GLN A 30 CG CD OE1 NE2 REMARK 470 LEU A 123 CG CD1 CD2 REMARK 470 LYS A 168 CG CD CE NZ REMARK 470 LYS A 194 CG CD CE NZ REMARK 470 ARG A 216 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 237 CG CD CE NZ REMARK 470 LYS A 270 CG CD CE NZ REMARK 470 GLU A 294 CG CD OE1 OE2 REMARK 470 ARG A 358 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 383 CG OD1 OD2 REMARK 470 ARG A 422 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 451 CG CD CE NZ REMARK 470 ASP A 452 CG OD1 OD2 REMARK 470 LEU D 22 CG CD1 CD2 REMARK 470 GLN D 30 CG CD OE1 NE2 REMARK 470 LEU D 123 CG CD1 CD2 REMARK 470 LYS D 168 CG CD CE NZ REMARK 470 LYS D 194 CG CD CE NZ REMARK 470 ARG D 216 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 237 CG CD CE NZ REMARK 470 LYS D 270 CG CD CE NZ REMARK 470 GLU D 294 CG CD OE1 OE2 REMARK 470 ARG D 358 CG CD NE CZ NH1 NH2 REMARK 470 ASP D 383 CG OD1 OD2 REMARK 470 ARG D 422 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 451 CG CD CE NZ REMARK 470 ASP D 452 CG OD1 OD2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LEU A 427 CG CD1 CD2 REMARK 480 LEU D 427 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP D 16 NH2 ARG D 43 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASP D 380 CA ASP D 380 CB -0.322 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 43 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 ASP A 380 N - CA - CB ANGL. DEV. = 25.9 DEGREES REMARK 500 ASP A 380 CA - CB - CG ANGL. DEV. = 36.5 DEGREES REMARK 500 ASP D 380 N - CA - CB ANGL. DEV. = 14.4 DEGREES REMARK 500 ASP D 380 CA - CB - CG ANGL. DEV. = 16.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 3 84.51 -156.10 REMARK 500 SER A 15 132.97 94.33 REMARK 500 PRO A 82 8.16 -46.84 REMARK 500 ASN A 182 -172.52 54.67 REMARK 500 THR A 268 -169.95 -113.43 REMARK 500 SER A 323 37.30 72.57 REMARK 500 GLU A 353 175.57 57.21 REMARK 500 ASP A 380 33.19 71.85 REMARK 500 SER B 4 -60.86 12.09 REMARK 500 ARG B 21 36.93 -144.64 REMARK 500 CYS B 57 36.08 -78.46 REMARK 500 ASN B 63 119.36 -163.29 REMARK 500 PRO B 64 164.18 -45.49 REMARK 500 HIS B 65 -68.04 -157.83 REMARK 500 ARG B 66 -106.26 -135.97 REMARK 500 ARG B 121 -80.47 -56.87 REMARK 500 ASP D 3 83.62 -150.95 REMARK 500 SER D 15 143.33 103.13 REMARK 500 LEU D 57 111.13 -34.57 REMARK 500 PRO D 82 12.60 -69.68 REMARK 500 ASN D 182 -171.08 50.56 REMARK 500 GLU D 353 169.26 65.30 REMARK 500 SER E 4 -95.56 36.60 REMARK 500 PRO E 18 -31.48 -37.93 REMARK 500 ARG E 21 39.06 -158.34 REMARK 500 ILE E 56 -30.89 -39.05 REMARK 500 GLU E 58 77.36 138.82 REMARK 500 ASN E 59 55.96 14.33 REMARK 500 LYS E 60 -56.08 -121.80 REMARK 500 HIS E 65 -137.12 -130.43 REMARK 500 ASN E 68 34.10 74.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 434 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 1A4Y A 1 460 UNP P13489 RINI_HUMAN 1 460 DBREF 1A4Y B 1 123 UNP P03950 ANGI_HUMAN 25 147 DBREF 1A4Y D 1 460 UNP P13489 RINI_HUMAN 1 460 DBREF 1A4Y E 1 123 UNP P03950 ANGI_HUMAN 25 147 SEQRES 1 A 460 SER LEU ASP ILE GLN SER LEU ASP ILE GLN CYS GLU GLU SEQRES 2 A 460 LEU SER ASP ALA ARG TRP ALA GLU LEU LEU PRO LEU LEU SEQRES 3 A 460 GLN GLN CYS GLN VAL VAL ARG LEU ASP ASP CYS GLY LEU SEQRES 4 A 460 THR GLU ALA ARG CYS LYS ASP ILE SER SER ALA LEU ARG SEQRES 5 A 460 VAL ASN PRO ALA LEU ALA GLU LEU ASN LEU ARG SER ASN SEQRES 6 A 460 GLU LEU GLY ASP VAL GLY VAL HIS CYS VAL LEU GLN GLY SEQRES 7 A 460 LEU GLN THR PRO SER CYS LYS ILE GLN LYS LEU SER LEU SEQRES 8 A 460 GLN ASN CYS CYS LEU THR GLY ALA GLY CYS GLY VAL LEU SEQRES 9 A 460 SER SER THR LEU ARG THR LEU PRO THR LEU GLN GLU LEU SEQRES 10 A 460 HIS LEU SER ASP ASN LEU LEU GLY ASP ALA GLY LEU GLN SEQRES 11 A 460 LEU LEU CYS GLU GLY LEU LEU ASP PRO GLN CYS ARG LEU SEQRES 12 A 460 GLU LYS LEU GLN LEU GLU TYR CYS SER LEU SER ALA ALA SEQRES 13 A 460 SER CYS GLU PRO LEU ALA SER VAL LEU ARG ALA LYS PRO SEQRES 14 A 460 ASP PHE LYS GLU LEU THR VAL SER ASN ASN ASP ILE ASN SEQRES 15 A 460 GLU ALA GLY VAL ARG VAL LEU CYS GLN GLY LEU LYS ASP SEQRES 16 A 460 SER PRO CYS GLN LEU GLU ALA LEU LYS LEU GLU SER CYS SEQRES 17 A 460 GLY VAL THR SER ASP ASN CYS ARG ASP LEU CYS GLY ILE SEQRES 18 A 460 VAL ALA SER LYS ALA SER LEU ARG GLU LEU ALA LEU GLY SEQRES 19 A 460 SER ASN LYS LEU GLY ASP VAL GLY MET ALA GLU LEU CYS SEQRES 20 A 460 PRO GLY LEU LEU HIS PRO SER SER ARG LEU ARG THR LEU SEQRES 21 A 460 TRP ILE TRP GLU CYS GLY ILE THR ALA LYS GLY CYS GLY SEQRES 22 A 460 ASP LEU CYS ARG VAL LEU ARG ALA LYS GLU SER LEU LYS SEQRES 23 A 460 GLU LEU SER LEU ALA GLY ASN GLU LEU GLY ASP GLU GLY SEQRES 24 A 460 ALA ARG LEU LEU CYS GLU THR LEU LEU GLU PRO GLY CYS SEQRES 25 A 460 GLN LEU GLU SER LEU TRP VAL LYS SER CYS SER PHE THR SEQRES 26 A 460 ALA ALA CYS CYS SER HIS PHE SER SER VAL LEU ALA GLN SEQRES 27 A 460 ASN ARG PHE LEU LEU GLU LEU GLN ILE SER ASN ASN ARG SEQRES 28 A 460 LEU GLU ASP ALA GLY VAL ARG GLU LEU CYS GLN GLY LEU SEQRES 29 A 460 GLY GLN PRO GLY SER VAL LEU ARG VAL LEU TRP LEU ALA SEQRES 30 A 460 ASP CYS ASP VAL SER ASP SER SER CYS SER SER LEU ALA SEQRES 31 A 460 ALA THR LEU LEU ALA ASN HIS SER LEU ARG GLU LEU ASP SEQRES 32 A 460 LEU SER ASN ASN CYS LEU GLY ASP ALA GLY ILE LEU GLN SEQRES 33 A 460 LEU VAL GLU SER VAL ARG GLN PRO GLY CYS LEU LEU GLU SEQRES 34 A 460 GLN LEU VAL LEU TYR ASP ILE TYR TRP SER GLU GLU MET SEQRES 35 A 460 GLU ASP ARG LEU GLN ALA LEU GLU LYS ASP LYS PRO SER SEQRES 36 A 460 LEU ARG VAL ILE SER SEQRES 1 B 123 GLN ASP ASN SER ARG TYR THR HIS PHE LEU THR GLN HIS SEQRES 2 B 123 TYR ASP ALA LYS PRO GLN GLY ARG ASP ASP ARG TYR CYS SEQRES 3 B 123 GLU SER ILE MET ARG ARG ARG GLY LEU THR SER PRO CYS SEQRES 4 B 123 LYS ASP ILE ASN THR PHE ILE HIS GLY ASN LYS ARG SER SEQRES 5 B 123 ILE LYS ALA ILE CYS GLU ASN LYS ASN GLY ASN PRO HIS SEQRES 6 B 123 ARG GLU ASN LEU ARG ILE SER LYS SER SER PHE GLN VAL SEQRES 7 B 123 THR THR CYS LYS LEU HIS GLY GLY SER PRO TRP PRO PRO SEQRES 8 B 123 CYS GLN TYR ARG ALA THR ALA GLY PHE ARG ASN VAL VAL SEQRES 9 B 123 VAL ALA CYS GLU ASN GLY LEU PRO VAL HIS LEU ASP GLN SEQRES 10 B 123 SER ILE PHE ARG ARG PRO SEQRES 1 D 460 SER LEU ASP ILE GLN SER LEU ASP ILE GLN CYS GLU GLU SEQRES 2 D 460 LEU SER ASP ALA ARG TRP ALA GLU LEU LEU PRO LEU LEU SEQRES 3 D 460 GLN GLN CYS GLN VAL VAL ARG LEU ASP ASP CYS GLY LEU SEQRES 4 D 460 THR GLU ALA ARG CYS LYS ASP ILE SER SER ALA LEU ARG SEQRES 5 D 460 VAL ASN PRO ALA LEU ALA GLU LEU ASN LEU ARG SER ASN SEQRES 6 D 460 GLU LEU GLY ASP VAL GLY VAL HIS CYS VAL LEU GLN GLY SEQRES 7 D 460 LEU GLN THR PRO SER CYS LYS ILE GLN LYS LEU SER LEU SEQRES 8 D 460 GLN ASN CYS CYS LEU THR GLY ALA GLY CYS GLY VAL LEU SEQRES 9 D 460 SER SER THR LEU ARG THR LEU PRO THR LEU GLN GLU LEU SEQRES 10 D 460 HIS LEU SER ASP ASN LEU LEU GLY ASP ALA GLY LEU GLN SEQRES 11 D 460 LEU LEU CYS GLU GLY LEU LEU ASP PRO GLN CYS ARG LEU SEQRES 12 D 460 GLU LYS LEU GLN LEU GLU TYR CYS SER LEU SER ALA ALA SEQRES 13 D 460 SER CYS GLU PRO LEU ALA SER VAL LEU ARG ALA LYS PRO SEQRES 14 D 460 ASP PHE LYS GLU LEU THR VAL SER ASN ASN ASP ILE ASN SEQRES 15 D 460 GLU ALA GLY VAL ARG VAL LEU CYS GLN GLY LEU LYS ASP SEQRES 16 D 460 SER PRO CYS GLN LEU GLU ALA LEU LYS LEU GLU SER CYS SEQRES 17 D 460 GLY VAL THR SER ASP ASN CYS ARG ASP LEU CYS GLY ILE SEQRES 18 D 460 VAL ALA SER LYS ALA SER LEU ARG GLU LEU ALA LEU GLY SEQRES 19 D 460 SER ASN LYS LEU GLY ASP VAL GLY MET ALA GLU LEU CYS SEQRES 20 D 460 PRO GLY LEU LEU HIS PRO SER SER ARG LEU ARG THR LEU SEQRES 21 D 460 TRP ILE TRP GLU CYS GLY ILE THR ALA LYS GLY CYS GLY SEQRES 22 D 460 ASP LEU CYS ARG VAL LEU ARG ALA LYS GLU SER LEU LYS SEQRES 23 D 460 GLU LEU SER LEU ALA GLY ASN GLU LEU GLY ASP GLU GLY SEQRES 24 D 460 ALA ARG LEU LEU CYS GLU THR LEU LEU GLU PRO GLY CYS SEQRES 25 D 460 GLN LEU GLU SER LEU TRP VAL LYS SER CYS SER PHE THR SEQRES 26 D 460 ALA ALA CYS CYS SER HIS PHE SER SER VAL LEU ALA GLN SEQRES 27 D 460 ASN ARG PHE LEU LEU GLU LEU GLN ILE SER ASN ASN ARG SEQRES 28 D 460 LEU GLU ASP ALA GLY VAL ARG GLU LEU CYS GLN GLY LEU SEQRES 29 D 460 GLY GLN PRO GLY SER VAL LEU ARG VAL LEU TRP LEU ALA SEQRES 30 D 460 ASP CYS ASP VAL SER ASP SER SER CYS SER SER LEU ALA SEQRES 31 D 460 ALA THR LEU LEU ALA ASN HIS SER LEU ARG GLU LEU ASP SEQRES 32 D 460 LEU SER ASN ASN CYS LEU GLY ASP ALA GLY ILE LEU GLN SEQRES 33 D 460 LEU VAL GLU SER VAL ARG GLN PRO GLY CYS LEU LEU GLU SEQRES 34 D 460 GLN LEU VAL LEU TYR ASP ILE TYR TRP SER GLU GLU MET SEQRES 35 D 460 GLU ASP ARG LEU GLN ALA LEU GLU LYS ASP LYS PRO SER SEQRES 36 D 460 LEU ARG VAL ILE SER SEQRES 1 E 123 GLN ASP ASN SER ARG TYR THR HIS PHE LEU THR GLN HIS SEQRES 2 E 123 TYR ASP ALA LYS PRO GLN GLY ARG ASP ASP ARG TYR CYS SEQRES 3 E 123 GLU SER ILE MET ARG ARG ARG GLY LEU THR SER PRO CYS SEQRES 4 E 123 LYS ASP ILE ASN THR PHE ILE HIS GLY ASN LYS ARG SER SEQRES 5 E 123 ILE LYS ALA ILE CYS GLU ASN LYS ASN GLY ASN PRO HIS SEQRES 6 E 123 ARG GLU ASN LEU ARG ILE SER LYS SER SER PHE GLN VAL SEQRES 7 E 123 THR THR CYS LYS LEU HIS GLY GLY SER PRO TRP PRO PRO SEQRES 8 E 123 CYS GLN TYR ARG ALA THR ALA GLY PHE ARG ASN VAL VAL SEQRES 9 E 123 VAL ALA CYS GLU ASN GLY LEU PRO VAL HIS LEU ASP GLN SEQRES 10 E 123 SER ILE PHE ARG ARG PRO FORMUL 5 HOH *133(H2 O) HELIX 1 1 ASP A 16 LEU A 26 1 11 HELIX 2 2 CYS A 44 VAL A 53 1 10 HELIX 3 3 GLY A 68 GLY A 78 1 11 HELIX 4 4 GLY A 98 THR A 110 5 13 HELIX 5 5 GLY A 125 LEU A 136 1 12 HELIX 6 6 ALA A 155 ALA A 167 5 13 HELIX 7 7 ASN A 182 ASP A 195 1 14 HELIX 8 8 ASP A 213 SER A 224 5 12 HELIX 9 9 GLY A 239 LEU A 250 1 12 HELIX 10 10 ALA A 269 LEU A 279 1 11 HELIX 11 11 GLY A 296 LEU A 308 1 13 HELIX 12 12 ALA A 326 GLN A 338 5 13 HELIX 13 13 GLU A 353 LEU A 364 1 12 HELIX 14 14 CYS A 386 ALA A 395 1 10 HELIX 15 15 ASP A 411 ARG A 422 1 12 HELIX 16 16 GLU A 440 ASP A 452 1 13 HELIX 17 17 ARG B 5 HIS B 13 1 9 HELIX 18 18 ASP B 23 ARG B 33 1 11 HELIX 19 19 LYS B 50 CYS B 57 1 8 HELIX 20 20 SER B 118 PHE B 120 5 3 HELIX 21 21 ASP D 16 LEU D 26 1 11 HELIX 22 22 ARG D 43 VAL D 53 1 11 HELIX 23 23 GLY D 68 GLN D 80 1 13 HELIX 24 24 GLY D 98 THR D 110 5 13 HELIX 25 25 GLY D 125 LEU D 136 1 12 HELIX 26 26 ALA D 155 ALA D 167 5 13 HELIX 27 27 ASN D 182 ASP D 195 1 14 HELIX 28 28 ASN D 214 SER D 224 1 11 HELIX 29 29 GLY D 239 LEU D 250 1 12 HELIX 30 30 ALA D 269 ALA D 281 1 13 HELIX 31 31 GLY D 296 LEU D 308 1 13 HELIX 32 32 ALA D 326 GLN D 338 5 13 HELIX 33 33 GLU D 353 LEU D 364 1 12 HELIX 34 34 CYS D 386 ALA D 395 1 10 HELIX 35 35 ASP D 411 ARG D 422 1 12 HELIX 36 36 GLU D 440 ASP D 452 1 13 HELIX 37 37 ARG E 5 HIS E 13 1 9 HELIX 38 38 ASP E 23 ARG E 32 1 10 HELIX 39 39 LYS E 50 ALA E 55 1 6 HELIX 40 40 GLN E 117 PHE E 120 5 4 SHEET 1 A17 SER A 6 GLN A 10 0 SHEET 2 A17 VAL A 31 ASP A 35 1 N VAL A 31 O LEU A 7 SHEET 3 A17 GLU A 59 ASN A 61 1 N GLU A 59 O VAL A 32 SHEET 4 A17 LYS A 88 SER A 90 1 N LYS A 88 O LEU A 60 SHEET 5 A17 GLU A 116 HIS A 118 1 N GLU A 116 O LEU A 89 SHEET 6 A17 LYS A 145 GLN A 147 1 N LYS A 145 O LEU A 117 SHEET 7 A17 GLU A 173 THR A 175 1 N GLU A 173 O LEU A 146 SHEET 8 A17 ALA A 202 LYS A 204 1 N ALA A 202 O LEU A 174 SHEET 9 A17 GLU A 230 ALA A 232 1 N GLU A 230 O LEU A 203 SHEET 10 A17 THR A 259 TRP A 261 1 N THR A 259 O LEU A 231 SHEET 11 A17 GLU A 287 SER A 289 1 N GLU A 287 O LEU A 260 SHEET 12 A17 SER A 316 TRP A 318 1 N SER A 316 O LEU A 288 SHEET 13 A17 GLU A 344 GLN A 346 1 N GLU A 344 O LEU A 317 SHEET 14 A17 VAL A 373 TRP A 375 1 N VAL A 373 O LEU A 345 SHEET 15 A17 GLU A 401 ASP A 403 1 N GLU A 401 O LEU A 374 SHEET 16 A17 GLN A 430 VAL A 432 1 N GLN A 430 O LEU A 402 SHEET 17 A17 ARG A 457 ILE A 459 1 N ARG A 457 O LEU A 431 SHEET 1 B 3 ILE B 42 ILE B 46 0 SHEET 2 B 3 PHE B 76 LEU B 83 -1 N CYS B 81 O ASN B 43 SHEET 3 B 3 TYR B 94 ARG B 101 -1 N ARG B 101 O PHE B 76 SHEET 1 C 3 LEU B 69 ILE B 71 0 SHEET 2 C 3 VAL B 104 CYS B 107 -1 N VAL B 105 O ARG B 70 SHEET 3 C 3 PRO B 112 LEU B 115 -1 N HIS B 114 O ALA B 106 SHEET 1 D17 SER D 6 GLN D 10 0 SHEET 2 D17 VAL D 31 ASP D 35 1 N VAL D 31 O LEU D 7 SHEET 3 D17 GLU D 59 ASN D 61 1 N GLU D 59 O VAL D 32 SHEET 4 D17 LYS D 88 SER D 90 1 N LYS D 88 O LEU D 60 SHEET 5 D17 GLU D 116 HIS D 118 1 N GLU D 116 O LEU D 89 SHEET 6 D17 LYS D 145 GLN D 147 1 N LYS D 145 O LEU D 117 SHEET 7 D17 GLU D 173 THR D 175 1 N GLU D 173 O LEU D 146 SHEET 8 D17 ALA D 202 LYS D 204 1 N ALA D 202 O LEU D 174 SHEET 9 D17 GLU D 230 ALA D 232 1 N GLU D 230 O LEU D 203 SHEET 10 D17 THR D 259 TRP D 261 1 N THR D 259 O LEU D 231 SHEET 11 D17 GLU D 287 SER D 289 1 N GLU D 287 O LEU D 260 SHEET 12 D17 SER D 316 TRP D 318 1 N SER D 316 O LEU D 288 SHEET 13 D17 GLU D 344 GLN D 346 1 N GLU D 344 O LEU D 317 SHEET 14 D17 VAL D 373 TRP D 375 1 N VAL D 373 O LEU D 345 SHEET 15 D17 GLU D 401 ASP D 403 1 N GLU D 401 O LEU D 374 SHEET 16 D17 GLN D 430 VAL D 432 1 N GLN D 430 O LEU D 402 SHEET 17 D17 ARG D 457 ILE D 459 1 N ARG D 457 O LEU D 431 SHEET 1 E 3 ILE E 42 ILE E 46 0 SHEET 2 E 3 PHE E 76 LEU E 83 -1 N CYS E 81 O ASN E 43 SHEET 3 E 3 TYR E 94 ARG E 101 -1 N ARG E 101 O PHE E 76 SHEET 1 F 3 LEU E 69 ILE E 71 0 SHEET 2 F 3 VAL E 104 GLU E 108 -1 N VAL E 105 O ARG E 70 SHEET 3 F 3 LEU E 111 LEU E 115 -1 N HIS E 114 O ALA E 106 SSBOND 1 CYS B 26 CYS B 81 1555 1555 2.03 SSBOND 2 CYS B 39 CYS B 92 1555 1555 2.03 SSBOND 3 CYS B 57 CYS B 107 1555 1555 2.03 SSBOND 4 CYS E 26 CYS E 81 1555 1555 2.04 SSBOND 5 CYS E 39 CYS E 92 1555 1555 2.03 SSBOND 6 CYS E 57 CYS E 107 1555 1555 2.02 CISPEP 1 SER B 37 PRO B 38 0 0.28 CISPEP 2 PRO B 90 PRO B 91 0 -0.51 CISPEP 3 SER E 37 PRO E 38 0 -0.08 CISPEP 4 PRO E 90 PRO E 91 0 -0.09 CRYST1 66.553 105.605 93.516 90.00 107.09 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015026 0.000000 0.004620 0.00000 SCALE2 0.000000 0.009469 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011187 0.00000 MTRIX1 1 -0.639080 0.581170 0.503810 10.75084 1 MTRIX2 1 0.591650 -0.047090 0.804820 -16.24662 1 MTRIX3 1 0.491450 0.812420 -0.313750 11.34353 1