PDB Short entry for 1AA5
HEADER    ANTIBIOTIC                              23-JAN-97   1AA5              
TITLE     VANCOMYCIN                                                            
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: VANCOMYCIN;                                                
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES;                                                      
SOURCE   3 ORGANISM_SCIENTIFIC: AMYCOLATOPSIS ORIENTALIS;                       
SOURCE   4 ORGANISM_TAXID: 31958                                                
KEYWDS    GLYCOPEPTIDE, ANTIBIOTIC                                              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    P.J.LOLL,A.E.BEVIVINO,B.D.KORTY,P.H.AXELSEN                           
REVDAT   7   15-NOV-23 1AA5    1       HETSYN LINK   ATOM                       
REVDAT   6   29-JUL-20 1AA5    1       COMPND REMARK SEQRES HETNAM              
REVDAT   6 2                   1       LINK   SITE   ATOM                       
REVDAT   5   19-OCT-16 1AA5    1       REMARK                                   
REVDAT   4   27-JUL-11 1AA5    1       HETATM REMARK                            
REVDAT   3   13-JUL-11 1AA5    1       VERSN                                    
REVDAT   2   24-FEB-09 1AA5    1       VERSN                                    
REVDAT   1   20-AUG-97 1AA5    0                                                
JRNL        AUTH   P.J.LOLL,A.E.BEVIVINO,B.D.KORTY,P.H.AXELSEN                  
JRNL        TITL   SIMULTANEOUS RECOGNITION OF A CARBOXYLATE-CONTAINING LIGAND  
JRNL        TITL 2 AND AN INTRAMOLECULAR SURROGATE LIGAND IN THE CRYSTAL        
JRNL        TITL 3 STRUCTURE OF AN ASYMMETRIC VANCOMYCIN DIMER.                 
JRNL        REF    J.AM.CHEM.SOC.                V. 119  1516 1997              
JRNL        REFN                   ISSN 0002-7863                               
JRNL        DOI    10.1021/JA963566P                                            
REMARK   2                                                                      
REMARK   2 RESOLUTION.    0.89 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : SHELXL-93                                            
REMARK   3   AUTHORS     : G.M.SHELDRICK                                        
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 0.89                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 4.00                           
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 80.0                           
REMARK   3   CROSS-VALIDATION METHOD           : NULL                           
REMARK   3   FREE R VALUE TEST SET SELECTION   : NULL                           
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (NO CUTOFF).                         
REMARK   3   R VALUE   (WORKING + TEST SET, NO CUTOFF) : 0.124                  
REMARK   3   R VALUE          (WORKING SET, NO CUTOFF) : 0.124                  
REMARK   3   FREE R VALUE                  (NO CUTOFF) : NULL                   
REMARK   3   FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL                   
REMARK   3   FREE R VALUE TEST SET COUNT   (NO CUTOFF) : NULL                   
REMARK   3   TOTAL NUMBER OF REFLECTIONS   (NO CUTOFF) : 17899                  
REMARK   3                                                                      
REMARK   3  FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F).                     
REMARK   3   R VALUE   (WORKING + TEST SET, F>4SIG(F)) : 0.112                  
REMARK   3   R VALUE          (WORKING SET, F>4SIG(F)) : 0.112                  
REMARK   3   FREE R VALUE                  (F>4SIG(F)) : NULL                   
REMARK   3   FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL                   
REMARK   3   FREE R VALUE TEST SET COUNT   (F>4SIG(F)) : NULL                   
REMARK   3   TOTAL NUMBER OF REFLECTIONS   (F>4SIG(F)) : 17479                  
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS      : 160                                           
REMARK   3   NUCLEIC ACID ATOMS : 0                                             
REMARK   3   HETEROGEN ATOMS    : 50                                            
REMARK   3   SOLVENT ATOMS      : 55                                            
REMARK   3                                                                      
REMARK   3  MODEL REFINEMENT.                                                   
REMARK   3   OCCUPANCY SUM OF NON-HYDROGEN ATOMS      : 255.40                  
REMARK   3   OCCUPANCY SUM OF HYDROGEN ATOMS          : 158.00                  
REMARK   3   NUMBER OF DISCRETELY DISORDERED RESIDUES : 3                       
REMARK   3   NUMBER OF LEAST-SQUARES PARAMETERS       : 2553                    
REMARK   3   NUMBER OF RESTRAINTS                     : 3647                    
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM RESTRAINT TARGET VALUES.                        
REMARK   3   BOND LENGTHS                         (A) : NULL                    
REMARK   3   ANGLE DISTANCES                      (A) : NULL                    
REMARK   3   SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.019                   
REMARK   3   DISTANCES FROM RESTRAINT PLANES      (A) : NULL                    
REMARK   3   ZERO CHIRAL VOLUMES               (A**3) : NULL                    
REMARK   3   NON-ZERO CHIRAL VOLUMES           (A**3) : NULL                    
REMARK   3   ANTI-BUMPING DISTANCE RESTRAINTS     (A) : NULL                    
REMARK   3   RIGID-BOND ADP COMPONENTS         (A**2) : 0.008                   
REMARK   3   SIMILAR ADP COMPONENTS            (A**2) : 0.011                   
REMARK   3   APPROXIMATELY ISOTROPIC ADPS      (A**2) : 0.025                   
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED: NULL                                                  
REMARK   3                                                                      
REMARK   3  STEREOCHEMISTRY TARGET VALUES : NULL                                
REMARK   3   SPECIAL CASE: NULL                                                 
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: REFINEMENT WAS CARRIED OUT VS. F**2;      
REMARK   3  SIMILAR 1,2 AND 1,3 DISTANCE RESTRAINTS WERE APPLIED TO THE TWO     
REMARK   3  VANCOMYCIN MOLECULES. ALSO, RESTRAINTS WERE IMPOSED TO LIMIT        
REMARK   3  DEVIATIONS OF RINGS AND PEPTIDE BONDS FROM PLANARITY AND            
REMARK   3  DIFFERENCES IN ALONG-BOND COMPONENTS OF ADPS. ADPS FOR SOLVENT      
REMARK   3  WERE RESTRAINED TO BE APPROXIMATELY ISOTROPIC, AND ANTIBUMPING      
REMARK   3  RESTRAINTS WERE USED TO PREVENT SOLVENT WATER MOLECULES FROM        
REMARK   3  VIOLATING MINIMUM CONTACT DISTANCES. CONJUGATE GRADIENT LEAST       
REMARK   3  SQUARES WAS USED FOR MOST OF THE REFINEMENT, WITH BLOCKED LEAST     
REMARK   3  SQUARES AT THE END.                                                 
REMARK   4                                                                      
REMARK   4 1AA5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.                                
REMARK 100 THE DEPOSITION ID IS D_1000170583.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : APR-96                             
REMARK 200  TEMPERATURE           (KELVIN) : 98                                 
REMARK 200  PH                             : 4.6                                
REMARK 200  NUMBER OF CRYSTALS USED        : 2                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : NSLS                               
REMARK 200  BEAMLINE                       : X8C                                
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.85                               
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC                               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : MADNES, PROCOR                     
REMARK 200  DATA SCALING SOFTWARE          : XSCALE                             
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 17899                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 0.890                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 10.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 2.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 85.8                               
REMARK 200  DATA REDUNDANCY                : 12.80                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : 0.07600                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 100.0000                           
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 0.89                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 0.95                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 69.3                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 5.60                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : 0.14300                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 31.50                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: NULL                                           
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: DIRECT METHODS               
REMARK 200 SOFTWARE USED: SHELXL-93                                             
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 57.53                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS WERE GROWN BY MIXING EQUAL      
REMARK 280  VOLUMES OF A 25 MG/ML VANCOMYCIN SOLUTION AND 2.2 M NACL, 0.1 M     
REMARK 280  SODIUM ACETATE, PH 4.6 (RESERVOIR BUFFER) AND THEN SUSPENDING       
REMARK 280  THIS DROP OVER THE RESERVOIR. CRYSTALS WERE GROWN AT 293 K.,        
REMARK 280  VAPOR DIFFUSION - HANGING DROP                                      
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2                        
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,-Y,Z+1/2                                             
REMARK 290       3555   -Y+1/2,X+1/2,Z+3/4                                      
REMARK 290       4555   Y+1/2,-X+1/2,Z+1/4                                      
REMARK 290       5555   -X+1/2,Y+1/2,-Z+3/4                                     
REMARK 290       6555   X+1/2,-Y+1/2,-Z+1/4                                     
REMARK 290       7555   Y,X,-Z                                                  
REMARK 290       8555   -Y,-X,-Z+1/2                                            
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       32.92000            
REMARK 290   SMTRY1   3  0.000000 -1.000000  0.000000       14.22500            
REMARK 290   SMTRY2   3  1.000000  0.000000  0.000000       14.22500            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       49.38000            
REMARK 290   SMTRY1   4  0.000000  1.000000  0.000000       14.22500            
REMARK 290   SMTRY2   4 -1.000000  0.000000  0.000000       14.22500            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       16.46000            
REMARK 290   SMTRY1   5 -1.000000  0.000000  0.000000       14.22500            
REMARK 290   SMTRY2   5  0.000000  1.000000  0.000000       14.22500            
REMARK 290   SMTRY3   5  0.000000  0.000000 -1.000000       49.38000            
REMARK 290   SMTRY1   6  1.000000  0.000000  0.000000       14.22500            
REMARK 290   SMTRY2   6  0.000000 -1.000000  0.000000       14.22500            
REMARK 290   SMTRY3   6  0.000000  0.000000 -1.000000       16.46000            
REMARK 290   SMTRY1   7  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   7  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   7  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   8  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   8 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   8  0.000000  0.000000 -1.000000       32.92000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 1370 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 2890 ANGSTROM**2                        
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.8 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D                                  
REMARK 350   BIOMT1   2  0.000000 -1.000000  0.000000       14.22500            
REMARK 350   BIOMT2   2  1.000000  0.000000  0.000000       14.22500            
REMARK 350   BIOMT3   2  0.000000  0.000000  1.000000      -16.46000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375      HOH A2015  LIES ON A SPECIAL POSITION.                          
REMARK 400                                                                      
REMARK 400 COMPOUND                                                             
REMARK 400 VANCOMYCIN IS A TRICYCLIC GLYCOPEPTIDE. THE SCAFFOLD IS              
REMARK 400  A HEPTAPEPTIDE WITH THE CONFIGURATION D-D-L-D-D-L-L. IT IS          
REMARK 400  FURTHER GLYCOSYLATED BY A DISACCHARIDE MADE OF D-GLUCOSE            
REMARK 400  AND VANCOSAMINE.                                                    
REMARK 400  HERE, VANCOMYCIN IS REPRESENTED BY GROUPING TOGETHER THE            
REMARK 400  SEQUENCE (SEQRES) AND THE TWO LIGANDS (HET) BGC AND RER.            
REMARK 400                                                                      
REMARK 400 THE VANCOMYCIN IS GLYCOPEPTIDE, A MEMBER OF ANTIBIOTIC CLASS.        
REMARK 400                                                                      
REMARK 400  GROUP: 1                                                            
REMARK 400   NAME: VANCOMYCIN                                                   
REMARK 400   CHAIN: A, B, C, D                                                  
REMARK 400   COMPONENT_1: PEPTIDE LIKE POLYMER                                  
REMARK 400   COMPONENT_2: RESIDUE BGC                                           
REMARK 400   COMPONENT_3: RESIDUE RER                                           
REMARK 400   DESCRIPTION: VANCOMYCIN IS A TRICYCLIC GLYCOPEPTIDE, GLYCOSYLATED  
REMARK 400                BY A DISACCHARIDE (RESIDUES 8 AND 9) ON RESIDUE 4.    
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O2   BGC D     1     O5   RER D     2              2.01            
REMARK 500   C2   BGC D     1     C1   RER D     2              2.18            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASN A   3      -69.08   -100.65                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1C0Q   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF VANCOMYCIN COMPLEXED WITH 2-ACETOXY-D-          
REMARK 900 PROPANOIC ACID                                                       
REMARK 900 RELATED ID: 1C0R   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF VANCOMYCIN WITH D-LACTIC ACID                   
REMARK 900 RELATED ID: 1FVM   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF VANCOMYCIN COMPLEXED WITH DI-ACETYL-LYS-D-ALA-  
REMARK 900 D-ALA                                                                
REMARK 900 RELATED ID: 1GAC   RELATED DB: PDB                                   
REMARK 900 SOLUTION STRUCTURE OF A82846B COMPLEXED WITH ITS CELL WALL           
REMARK 900 PENTAPEPTIDE FRAGMENT                                                
REMARK 900 RELATED ID: 1GHG   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF VANCOMYCIN AGLYCON                              
REMARK 900 RELATED ID: 1PN3   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF TDP-EPI-VANCOSAMINYLTRANSFERASE GTFA COMPLEXD   
REMARK 900 WITH TDP AND DESVANCOSAMINYL VANCOMYCIN                              
REMARK 900 RELATED ID: 1PNV   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF TDP-EPI-VANCOSAMINYLTRANSFERASE GTFA COMPLEXED  
REMARK 900 WITH TDP AND VANCOMYCIN                                              
REMARK 900 RELATED ID: 1QD8   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF VANCOMYCIN COMPLEXED WITH N-ACETYL GLYCIN       
REMARK 900 RELATED ID: 1RRV   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF TDP-VANCOSAMINYLTRANSFERASE GTFD COMPLEXED      
REMARK 900 WITH TDP AND DESVANCOSAMINYL VANCOMYCIN.                             
REMARK 900 RELATED ID: 1SHO   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF VANCOMYCIN                                      
DBREF  1AA5 A    1     7  NOR    NOR00681 NOR00681         1      7             
DBREF  1AA5 B    1     7  NOR    NOR00681 NOR00681         1      7             
SEQRES   1 A    7  MLU OMZ ASN GHP GHP OMY 3FG                                  
SEQRES   1 B    7  MLU OMZ ASN GHP GHP OMY 3FG                                  
HET    MLU  A   1      31                                                       
HET    OMZ  A   2      21                                                       
HET    GHP  A   4      15                                                       
HET    GHP  A   5      17                                                       
HET    OMY  A   6      21                                                       
HET    3FG  A   7      20                                                       
HET    MLU  B   1      24                                                       
HET    OMZ  B   2      21                                                       
HET    GHP  B   4      16                                                       
HET    GHP  B   5      17                                                       
HET    OMY  B   6      21                                                       
HET    3FG  B   7      20                                                       
HET    BGC  C   1      21                                                       
HET    RER  C   2      26                                                       
HET    BGC  D   1      42                                                       
HET    RER  D   2      25                                                       
HET    ACY  A  11       8                                                       
HET     CL  A  21       1                                                       
HET     CL  A  22       1                                                       
HET     CL  B  21       1                                                       
HET     CL  B  22       1                                                       
HETNAM     MLU N-METHYL-D-LEUCINE                                               
HETNAM     OMZ (BETAR)-3-CHLORO-BETA-HYDROXY-D-TYROSINE                         
HETNAM     GHP (2R)-AMINO(4-HYDROXYPHENYL)ETHANOIC ACID                         
HETNAM     OMY (BETAR)-3-CHLORO-BETA-HYDROXY-L-TYROSINE                         
HETNAM     3FG (2S)-AMINO(3,5-DIHYDROXYPHENYL)ETHANOIC ACID                     
HETNAM     BGC BETA-D-GLUCOPYRANOSE                                             
HETNAM     RER VANCOSAMINE                                                      
HETNAM     ACY ACETIC ACID                                                      
HETNAM      CL CHLORIDE ION                                                     
HETSYN     BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE                               
HETSYN     RER (1R,3S,4S,5S)-3-AMINO-2,3,6-TRIDEOXY-3-METHYL-ALPHA-L-           
HETSYN   2 RER  ARABINO-HEXOPYRANOSE                                            
FORMUL   1  MLU    2(C7 H15 N O2)                                               
FORMUL   1  OMZ    2(C9 H10 CL N O4)                                            
FORMUL   1  GHP    4(C8 H9 N O3)                                                
FORMUL   1  OMY    2(C9 H10 CL N O4)                                            
FORMUL   1  3FG    2(C8 H9 N O4)                                                
FORMUL   3  BGC    2(C6 H12 O6)                                                 
FORMUL   3  RER    2(C7 H15 N O3)                                               
FORMUL   5  ACY    C2 H4 O2                                                     
FORMUL   6   CL    4(CL 1-)                                                     
FORMUL  10  HOH   *55(H2 O)                                                     
LINK         C   MLU A   1                 N   OMZ A   2     1555   1555  1.35  
LINK         C   OMZ A   2                 N   ASN A   3     1555   1555  1.33  
LINK         OH  OMZ A   2                 C5  GHP A   4     1555   1555  1.39  
LINK         C   ASN A   3                 N   GHP A   4     1555   1555  1.32  
LINK         C   GHP A   4                 N   GHP A   5     1555   1555  1.36  
LINK         C3  GHP A   4                 OCZ OMY A   6     1555   1555  1.39  
LINK         O4  GHP A   4                 C1  BGC C   1     1555   1555  1.41  
LINK         C   GHP A   5                 N   OMY A   6     1555   1555  1.33  
LINK         C3  GHP A   5                 CG1 3FG A   7     1555   1555  1.50  
LINK         C   OMY A   6                 N   3FG A   7     1555   1555  1.34  
LINK         C   MLU B   1                 N   OMZ B   2     1555   1555  1.33  
LINK         C   OMZ B   2                 N   ASN B   3     1555   1555  1.32  
LINK         OH  OMZ B   2                 C5  GHP B   4     1555   1555  1.40  
LINK         C   ASN B   3                 N   GHP B   4     1555   1555  1.34  
LINK         C   GHP B   4                 N   GHP B   5     1555   1555  1.34  
LINK         C3  GHP B   4                 OCZ OMY B   6     1555   1555  1.38  
LINK         O4 BGHP B   4                 C1 BBGC D   1     1555   1555  1.45  
LINK         O4 AGHP B   4                 C1 ABGC D   1     1555   1555  1.41  
LINK         C   GHP B   5                 N   OMY B   6     1555   1555  1.34  
LINK         C3  GHP B   5                 CG1 3FG B   7     1555   1555  1.51  
LINK         C   OMY B   6                 N   3FG B   7     1555   1555  1.32  
LINK         O2  BGC C   1                 C1  RER C   2     1555   1555  1.41  
LINK         O2 BBGC D   1                 C1  RER D   2     1555   1555  1.10  
LINK         O2 ABGC D   1                 C1  RER D   2     1555   1555  1.47  
CISPEP   1 GHP A    5    OMY A    6          0         6.04                     
CISPEP   2 GHP B    5    OMY B    6          0        18.86                     
CRYST1   28.450   28.450   65.840  90.00  90.00  90.00 P 43 21 2    16          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.035149  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.035149  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.015188        0.00000                         
HETATM    1  N   MLU A   1      10.127   8.826  -4.030  1.00  4.98           N  
HETATM    2  CN  MLU A   1      10.446  10.141  -4.639  1.00  7.32           C  
HETATM    3  CA  MLU A   1       8.858   8.812  -3.244  1.00  4.18           C  
HETATM    4  C   MLU A   1       7.715   9.246  -4.189  1.00  3.80           C  
HETATM    5  O   MLU A   1       7.547   8.688  -5.252  1.00  5.85           O  
HETATM    6  CB  MLU A   1       8.552   7.426  -2.726  1.00  4.30           C  
HETATM    7  CG  MLU A   1       9.587   6.788  -1.780  1.00  4.89           C  
HETATM    8  CD1AMLU A   1       9.125   5.395  -1.392  0.74  5.46           C  
HETATM    9  CD1BMLU A   1      10.667   6.044  -2.523  0.26  5.31           C  
HETATM   10  CD2AMLU A   1       9.835   7.620  -0.583  0.74  7.84           C  
HETATM   11  CD2BMLU A   1       8.866   5.876  -0.846  0.26  5.59           C  
HETATM   12  H   MLU A   1      10.887   8.557  -3.424  1.00  7.47           H  
HETATM   13 HCN1 MLU A   1      11.271  10.077  -5.126  1.00 10.98           H  
HETATM   14 HCN2 MLU A   1      10.533  10.801  -3.948  1.00 10.98           H  
HETATM   15 HCN3 MLU A   1       9.740  10.396  -5.238  1.00 10.98           H  
HETATM   16  HA  MLU A   1       8.925   9.440  -2.494  1.00  6.27           H  
HETATM   17  HB2 MLU A   1       8.440   6.837  -3.489  1.00  6.45           H  
HETATM   18  HB3 MLU A   1       7.701   7.460  -2.261  1.00  6.45           H  
HETATM   19  HG  MLU A   1      10.432   6.702  -2.269  1.00  7.34           H  
HETATM   20 HD11AMLU A   1       8.972   4.876  -2.185  0.74  8.19           H  
HETATM   21 HD11BMLU A   1       8.184   6.367  -0.382  0.26  8.38           H  
HETATM   22 HD12AMLU A   1       8.311   5.457  -0.888  0.74  8.19           H  
HETATM   23 HD12BMLU A   1       9.487   5.511  -0.211  0.26  8.38           H  
HETATM   24 HD13AMLU A   1       9.801   4.971  -0.858  0.74  8.19           H  
HETATM   25 HD21AMLU A   1      10.127   8.494  -0.855  0.74 11.77           H  
HETATM   26 HD21BMLU A   1      11.298   5.684  -1.895  0.26  7.97           H  
HETATM   27 HD22AMLU A   1      10.515   7.210  -0.043  0.74 11.77           H  
HETATM   28 HD22BMLU A   1      11.118   6.647  -3.119  0.26  7.97           H  
HETATM   29 HD23AMLU A   1       9.025   7.698  -0.073  0.74 11.77           H  
HETATM   30 HD23BMLU A   1      10.274   5.329  -3.028  0.26  7.97           H  
HETATM   31 HN22 MLU A   1      10.062   8.136  -4.764  1.00  7.47           H  
HETATM   32  N   OMZ A   2       6.894  10.223  -3.742  1.00  3.44           N  
HETATM   33  CA  OMZ A   2       5.824  10.725  -4.588  1.00  3.72           C  
HETATM   34  C   OMZ A   2       4.491   9.963  -4.459  1.00  3.04           C  
HETATM   35  O   OMZ A   2       3.547  10.291  -5.161  1.00  3.76           O  
HETATM   36  CB  OMZ A   2       5.544  12.254  -4.376  1.00  3.81           C  
HETATM   37  OC  OMZ A   2       6.731  13.006  -4.505  1.00  4.29           O  
HETATM   38  CG  OMZ A   2       4.868  12.532  -3.066  1.00  3.68           C  
HETATM   39  CD1 OMZ A   2       3.489  12.760  -3.038  1.00  4.01           C  
HETATM   40  CD2 OMZ A   2       5.577  12.564  -1.859  1.00  3.89           C  
HETATM   41  CE1 OMZ A   2       2.836  12.923  -1.830  1.00  4.46           C  
HETATM   42 CL   OMZ A   2       1.135  13.234  -1.833  1.00  7.25          CL  
HETATM   43  CE2 OMZ A   2       4.904  12.695  -0.669  1.00  4.34           C  
HETATM   44  CZ  OMZ A   2       3.523  12.845  -0.655  1.00  4.40           C  
HETATM   45  OH  OMZ A   2       2.866  12.894   0.557  1.00  4.99           O  
HETATM   46  H   OMZ A   2       7.005  10.548  -2.953  1.00  5.16           H  
HETATM   47  HA  OMZ A   2       6.123  10.618  -5.515  1.00  5.58           H  
HETATM   48  HB  OMZ A   2       4.935  12.542  -5.088  1.00  5.71           H  
HETATM   49  HC  OMZ A   2       7.083  12.839  -5.227  1.00  6.44           H  
HETATM   50  HD1 OMZ A   2       3.009  12.801  -3.834  1.00  6.01           H  
HETATM   51  HD2 OMZ A   2       6.505  12.495  -1.863  1.00  5.83           H  
HETATM   52  HE2 OMZ A   2       5.375  12.684   0.132  1.00  6.50           H