PDB Short entry for 1ARD
HEADER    TRANSCRIPTION REGULATION                01-OCT-93   1ARD              
TITLE     STRUCTURES OF DNA-BINDING MUTANT ZINC FINGER DOMAINS: IMPLICATIONS FOR
TITLE    2 DNA BINDING                                                          
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: YEAST TRANSCRIPTION FACTOR ADR1;                           
COMPND   3 CHAIN: A;                                                            
COMPND   4 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE;                       
SOURCE   3 ORGANISM_COMMON: BAKER'S YEAST;                                      
SOURCE   4 ORGANISM_TAXID: 4932                                                 
KEYWDS    TRANSCRIPTION REGULATION                                              
EXPDTA    SOLUTION NMR                                                          
NUMMDL    10                                                                    
AUTHOR    R.C.HOFFMAN,R.X.XU,S.J.HORVATH,J.R.HERRIOTT,R.E.KLEVIT                
REVDAT   3   29-NOV-17 1ARD    1       REMARK HELIX                             
REVDAT   2   24-FEB-09 1ARD    1       VERSN                                    
REVDAT   1   31-JAN-94 1ARD    0                                                
JRNL        AUTH   R.C.HOFFMAN,S.J.HORVATH,R.E.KLEVIT                           
JRNL        TITL   STRUCTURES OF DNA-BINDING MUTANT ZINC FINGER DOMAINS:        
JRNL        TITL 2 IMPLICATIONS FOR DNA BINDING.                                
JRNL        REF    PROTEIN SCI.                  V.   2   951 1993              
JRNL        REFN                   ISSN 0961-8368                               
JRNL        PMID   8318900                                                      
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  AUTH   R.C.HOFFMAN,R.X.XU,R.E.KLEVIT,J.R.HERRIOTT                   
REMARK   1  TITL   A SIMPLE METHOD FOR THE REFINEMENT OF MODELS DERIVED FROM    
REMARK   1  TITL 2 NMR DATA DEMONSTRATED ON A ZINC FINGER DOMAIN FROM YEAST     
REMARK   1  TITL 3 ADR1                                                         
REMARK   1  REF    J.MAGN.RESON.                 V. 102    61 1993              
REMARK   1  REFN                   ISSN 0022-2364                               
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : NULL                                                 
REMARK   3   AUTHORS     : NULL                                                 
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1ARD COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.                                
REMARK 100 THE DEPOSITION ID IS D_1000171163.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : NULL                               
REMARK 210  PH                             : NULL                               
REMARK 210  IONIC STRENGTH                 : NULL                               
REMARK 210  PRESSURE                       : NULL                               
REMARK 210  SAMPLE CONTENTS                : NULL                               
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : NULL                               
REMARK 210  SPECTROMETER FIELD STRENGTH    : NULL                               
REMARK 210  SPECTROMETER MODEL             : NULL                               
REMARK 210  SPECTROMETER MANUFACTURER      : NULL                               
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NULL                               
REMARK 210   METHOD USED                   : NULL                               
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : NULL                               
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 10                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : NULL                               
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL                
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    CYS A   106     H    THR A   110              1.48            
REMARK 500   H    CYS A   106     O    ARG A   111              1.53            
REMARK 500   O    CYS A   106     N    THR A   110              2.16            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 PHE A 104      136.97    -22.21                                   
REMARK 500  1 CYS A 106       98.39    -59.67                                   
REMARK 500  1 VAL A 108      -71.59    -83.16                                   
REMARK 500  1 ARG A 124      -43.09    -28.41                                   
REMARK 500  1 THR A 127     -132.55   -151.42                                   
REMARK 500  1 ASN A 128       32.92   -162.68                                   
REMARK 500  2 PHE A 104      131.46    -19.37                                   
REMARK 500  2 CYS A 106       86.94    -57.84                                   
REMARK 500  2 VAL A 108      -72.88    -66.09                                   
REMARK 500  2 THR A 110       39.75     76.36                                   
REMARK 500  2 ARG A 124      -28.20    -36.10                                   
REMARK 500  2 THR A 127     -140.87   -149.24                                   
REMARK 500  3 PHE A 104      132.48    -35.70                                   
REMARK 500  3 CYS A 106       96.95    -51.15                                   
REMARK 500  3 THR A 110       36.79     95.28                                   
REMARK 500  4 PHE A 104      136.28    -20.82                                   
REMARK 500  4 CYS A 106      105.09    -57.14                                   
REMARK 500  4 GLU A 107       -5.19    -59.01                                   
REMARK 500  4 VAL A 108      -70.40    -90.88                                   
REMARK 500  4 THR A 110       28.94     85.01                                   
REMARK 500  4 ARG A 124      -28.39    -39.21                                   
REMARK 500  5 SER A 103      146.76   -174.97                                   
REMARK 500  5 CYS A 106       94.29    -59.59                                   
REMARK 500  5 GLU A 107      -18.47    -46.62                                   
REMARK 500  5 VAL A 108      -71.83    -75.48                                   
REMARK 500  5 THR A 110       33.29     82.69                                   
REMARK 500  5 ARG A 124       -6.79    -54.83                                   
REMARK 500  5 THR A 127     -140.13   -140.33                                   
REMARK 500  5 ASN A 128      -76.49    -26.89                                   
REMARK 500  6 PHE A 104      134.53    -16.15                                   
REMARK 500  6 CYS A 106       95.07    -59.82                                   
REMARK 500  6 GLU A 107      -17.32    -46.47                                   
REMARK 500  6 VAL A 108      -73.01    -78.35                                   
REMARK 500  6 ARG A 124       -6.91    -50.99                                   
REMARK 500  6 THR A 127     -137.57   -146.25                                   
REMARK 500  6 ASN A 128       76.67    177.44                                   
REMARK 500  7 PHE A 104      120.60    -15.46                                   
REMARK 500  7 CYS A 106       85.19    -68.84                                   
REMARK 500  7 THR A 110       60.80     32.79                                   
REMARK 500  7 GLU A 117      -38.21    -30.10                                   
REMARK 500  7 TYR A 123      -37.70    -37.29                                   
REMARK 500  7 ASN A 128      -65.95   -179.35                                   
REMARK 500  8 PHE A 104      121.34     -9.79                                   
REMARK 500  8 CYS A 106       91.59    -58.99                                   
REMARK 500  8 VAL A 108      -72.60    -68.56                                   
REMARK 500  8 THR A 110       57.17     38.07                                   
REMARK 500  8 TYR A 123      -34.22    -36.81                                   
REMARK 500  8 THR A 127     -136.63   -161.41                                   
REMARK 500  8 ASN A 128      112.02    -36.21                                   
REMARK 500  9 GLU A 107       -4.26    -58.24                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      61 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500  1 ARG A 102         0.27    SIDE CHAIN                              
REMARK 500  1 ARG A 111         0.16    SIDE CHAIN                              
REMARK 500  1 ARG A 115         0.23    SIDE CHAIN                              
REMARK 500  1 ARG A 121         0.10    SIDE CHAIN                              
REMARK 500  1 ARG A 124         0.26    SIDE CHAIN                              
REMARK 500  2 ARG A 102         0.26    SIDE CHAIN                              
REMARK 500  2 ARG A 111         0.19    SIDE CHAIN                              
REMARK 500  2 ARG A 115         0.16    SIDE CHAIN                              
REMARK 500  2 ARG A 121         0.18    SIDE CHAIN                              
REMARK 500  2 ARG A 124         0.30    SIDE CHAIN                              
REMARK 500  3 ARG A 102         0.20    SIDE CHAIN                              
REMARK 500  3 ARG A 111         0.13    SIDE CHAIN                              
REMARK 500  3 ARG A 115         0.27    SIDE CHAIN                              
REMARK 500  3 ARG A 121         0.28    SIDE CHAIN                              
REMARK 500  4 ARG A 102         0.17    SIDE CHAIN                              
REMARK 500  4 ARG A 111         0.18    SIDE CHAIN                              
REMARK 500  4 ARG A 115         0.29    SIDE CHAIN                              
REMARK 500  4 ARG A 121         0.13    SIDE CHAIN                              
REMARK 500  4 ARG A 124         0.15    SIDE CHAIN                              
REMARK 500  5 ARG A 102         0.18    SIDE CHAIN                              
REMARK 500  5 ARG A 111         0.30    SIDE CHAIN                              
REMARK 500  5 ARG A 115         0.22    SIDE CHAIN                              
REMARK 500  5 ARG A 121         0.19    SIDE CHAIN                              
REMARK 500  5 ARG A 124         0.09    SIDE CHAIN                              
REMARK 500  6 ARG A 102         0.26    SIDE CHAIN                              
REMARK 500  6 ARG A 111         0.10    SIDE CHAIN                              
REMARK 500  6 ARG A 115         0.30    SIDE CHAIN                              
REMARK 500  6 ARG A 121         0.19    SIDE CHAIN                              
REMARK 500  6 ARG A 124         0.17    SIDE CHAIN                              
REMARK 500  7 ARG A 102         0.08    SIDE CHAIN                              
REMARK 500  7 ARG A 111         0.12    SIDE CHAIN                              
REMARK 500  7 ARG A 115         0.24    SIDE CHAIN                              
REMARK 500  7 ARG A 121         0.10    SIDE CHAIN                              
REMARK 500  7 ARG A 124         0.27    SIDE CHAIN                              
REMARK 500  8 ARG A 102         0.21    SIDE CHAIN                              
REMARK 500  8 ARG A 111         0.19    SIDE CHAIN                              
REMARK 500  8 ARG A 115         0.30    SIDE CHAIN                              
REMARK 500  8 ARG A 121         0.28    SIDE CHAIN                              
REMARK 500  8 ARG A 124         0.14    SIDE CHAIN                              
REMARK 500  9 ARG A 102         0.17    SIDE CHAIN                              
REMARK 500  9 ARG A 111         0.23    SIDE CHAIN                              
REMARK 500  9 ARG A 115         0.18    SIDE CHAIN                              
REMARK 500  9 ARG A 121         0.29    SIDE CHAIN                              
REMARK 500  9 ARG A 124         0.13    SIDE CHAIN                              
REMARK 500 10 ARG A 111         0.15    SIDE CHAIN                              
REMARK 500 10 ARG A 115         0.26    SIDE CHAIN                              
REMARK 500 10 ARG A 124         0.23    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A   1  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HIS A 126   NE2                                                    
REMARK 620 2 CYS A 106   SG   99.1                                              
REMARK 620 3 CYS A 109   SG  139.1 121.0                                        
REMARK 620 4 HIS A 122   NE2  87.2  95.9  95.3                                  
REMARK 620 N                    1     2     3                                   
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1                    
DBREF  1ARD A  102   130  UNP    P07248   ADR1_YEAST     102    130             
SEQRES   1 A   29  ARG SER PHE VAL CYS GLU VAL CYS THR ARG ALA PHE ALA          
SEQRES   2 A   29  ARG GLN GLU HIS LEU LYS ARG HIS TYR ARG SER HIS THR          
SEQRES   3 A   29  ASN GLU LYS                                                  
HET     ZN  A   1       1                                                       
HETNAM      ZN ZINC ION                                                         
FORMUL   2   ZN    ZN 2+                                                        
HELIX    1 AAA GLN A  116  HIS A  126  1ALPHA AND 3/10 HELICAL H-BONDS    11    
SHEET    1 BBB 2 PHE A 104  CYS A 106  0                                        
SHEET    2 BBB 2 THR A 110  PHE A 113 -1                                        
LINK        ZN    ZN A   1                 NE2 HIS A 126     1555   1555  1.97  
LINK        ZN    ZN A   1                 SG  CYS A 106     1555   1555  2.30  
LINK        ZN    ZN A   1                 SG  CYS A 109     1555   1555  2.28  
LINK        ZN    ZN A   1                 NE2 HIS A 122     1555   1555  1.99  
SITE     1 AC1  5 CYS A 106  VAL A 108  CYS A 109  HIS A 122                    
SITE     2 AC1  5 HIS A 126                                                     
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000