PDB Short entry for 1AVR HEADER CALCIUM/PHOSPHOLIPID BINDING 17-OCT-91 1AVR TITLE CRYSTAL AND MOLECULAR STRUCTURE OF HUMAN ANNEXIN V AFTER REFINEMENT. TITLE 2 IMPLICATIONS FOR STRUCTURE, MEMBRANE BINDING AND ION CHANNEL TITLE 3 FORMATION OF THE ANNEXIN FAMILY OF PROTEINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANNEXIN V; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS CALCIUM/PHOSPHOLIPID BINDING, CALCIUM-PHOSPHOLIPID BINDING COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.HUBER,R.BERENDES,A.BURGER,M.SCHNEIDER,A.KARSHIKOV,H.LUECKE, AUTHOR 2 J.ROEMISCH,E.PAQUES REVDAT 4 07-FEB-24 1AVR 1 REMARK LINK REVDAT 3 24-FEB-09 1AVR 1 VERSN REVDAT 2 01-APR-03 1AVR 1 JRNL REVDAT 1 31-JAN-94 1AVR 0 JRNL AUTH R.HUBER,R.BERENDES,A.BURGER,M.SCHNEIDER,A.KARSHIKOV, JRNL AUTH 2 H.LUECKE,J.ROMISCH,E.PAQUES JRNL TITL CRYSTAL AND MOLECULAR STRUCTURE OF HUMAN ANNEXIN V AFTER JRNL TITL 2 REFINEMENT. IMPLICATIONS FOR STRUCTURE, MEMBRANE BINDING AND JRNL TITL 3 ION CHANNEL FORMATION OF THE ANNEXIN FAMILY OF PROTEINS. JRNL REF J.MOL.BIOL. V. 223 683 1992 JRNL REFN ISSN 0022-2836 JRNL PMID 1311770 JRNL DOI 10.1016/0022-2836(92)90984-R REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.HUBER,M.SCHNEIDER,I.MAYR,J.ROEMISCH,E.-P.PAQUES REMARK 1 TITL THE CALCIUM BINDING SITES IN HUMAN ANNEXIN V BY CRYSTAL REMARK 1 TITL 2 STRUCTURE ANALYSIS AT 2.0 ANGSTROMS RESOLUTION REMARK 1 REF FEBS LETT. V. 275 15 1990 REMARK 1 REFN ISSN 0014-5793 REMARK 1 REFERENCE 2 REMARK 1 AUTH R.HUBER,J.ROEMISCH,E.-P.PAQUES REMARK 1 TITL THE CRYSTAL AND MOLECULAR STRUCTURE OF HUMAN ANNEXIN V, AN REMARK 1 TITL 2 ANTICOAGULANT PROTEIN THAT BINDS TO CALCIUM AND MEMBRANES REMARK 1 REF EMBO J. V. 9 3867 1990 REMARK 1 REFN ISSN 0261-4189 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : EREF REMARK 3 AUTHORS : JACK,LEVITT REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2497 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 202 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.014 REMARK 3 BOND ANGLES (DEGREES) : 2.319 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1AVR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000171316. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 49.85000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.78091 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 32.11667 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 49.85000 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 28.78091 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 32.11667 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 49.85000 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 28.78091 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 32.11667 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.56182 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 64.23333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 57.56182 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 64.23333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 57.56182 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 64.23333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ASP A 320 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 319 CA C O CB CG OD1 OD2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN A 3 CB CG CD OE1 NE2 REMARK 480 LYS A 26 CD CE NZ REMARK 480 LYS A 79 NZ REMARK 480 ARG A 89 CD NH1 NH2 REMARK 480 LYS A 101 CD CE NZ REMARK 480 GLU A 120 CD OE1 OE2 REMARK 480 GLU A 169 CG CD OE1 OE2 REMARK 480 GLN A 171 OE1 NE2 REMARK 480 GLU A 173 CD OE1 OE2 REMARK 480 GLN A 174 CG CD OE1 NE2 REMARK 480 GLN A 181 CD OE1 NE2 REMARK 480 LYS A 186 CG CD CE NZ REMARK 480 LYS A 193 CE NZ REMARK 480 LYS A 208 NZ REMARK 480 GLU A 223 OE1 OE2 REMARK 480 ASP A 226 CG OD1 OD2 REMARK 480 ARG A 227 CZ NH1 NH2 REMARK 480 GLU A 228 CA C O CB CG CD OE1 REMARK 480 GLU A 228 OE2 REMARK 480 THR A 229 N CB OG1 CG2 REMARK 480 LYS A 260 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 187 NE1 TRP A 187 CE2 -0.100 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 18 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 18 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG A 63 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG A 201 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 289 NE - CZ - NH1 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 160 62.26 -113.77 REMARK 500 ALA A 165 -80.75 -142.87 REMARK 500 SER A 246 109.24 -170.46 REMARK 500 ILE A 279 -72.98 -117.57 REMARK 500 ALA A 293 27.79 48.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ILE A 167 11.75 REMARK 500 THR A 229 11.87 REMARK 500 GLU A 318 -15.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 323 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 28 O REMARK 620 2 GLY A 30 O 95.3 REMARK 620 3 GLY A 32 O 99.6 89.7 REMARK 620 4 GLU A 72 OE2 87.2 138.8 130.6 REMARK 620 5 GLU A 72 OE1 85.7 168.5 78.8 52.7 REMARK 620 6 HOH A 403 O 167.1 88.2 92.8 82.0 93.4 REMARK 620 7 HOH A 706 O 85.9 70.2 159.6 69.0 121.4 83.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 324 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 33 O REMARK 620 2 GLU A 35 OE1 82.4 REMARK 620 3 GLU A 35 OE2 84.6 49.8 REMARK 620 4 HOH A 498 O 93.0 113.5 63.7 REMARK 620 5 HOH A 499 O 70.7 153.0 127.6 72.0 REMARK 620 6 HOH A 500 O 163.9 113.7 106.0 81.3 93.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 325 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 70 O REMARK 620 2 LEU A 73 O 87.3 REMARK 620 3 GLU A 78 OE1 112.6 83.7 REMARK 620 4 HOH A 605 O 170.3 96.5 76.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 321 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 100 O REMARK 620 2 GLY A 102 O 97.8 REMARK 620 3 GLY A 104 O 108.7 90.5 REMARK 620 4 ASP A 144 OD1 89.9 146.0 118.4 REMARK 620 5 ASP A 144 OD2 79.9 167.6 78.9 46.4 REMARK 620 6 HOH A 478 O 166.1 93.3 79.4 76.3 91.0 REMARK 620 7 HOH A 481 O 90.1 80.7 160.3 66.2 111.4 83.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 322 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 259 O REMARK 620 2 GLY A 261 O 87.6 REMARK 620 3 GLY A 263 O 96.6 83.1 REMARK 620 4 ASP A 303 OD1 81.9 149.0 126.9 REMARK 620 5 ASP A 303 OD2 87.8 160.1 78.2 48.8 REMARK 620 6 HOH A 483 O 169.1 98.0 93.3 88.5 89.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 321 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 322 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 323 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 324 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 325 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 550 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 551 DBREF 1AVR A 2 320 UNP P08758 ANXA5_HUMAN 1 319 SEQRES 1 A 320 MET ALA GLN VAL LEU ARG GLY THR VAL THR ASP PHE PRO SEQRES 2 A 320 GLY PHE ASP GLU ARG ALA ASP ALA GLU THR LEU ARG LYS SEQRES 3 A 320 ALA MET LYS GLY LEU GLY THR ASP GLU GLU SER ILE LEU SEQRES 4 A 320 THR LEU LEU THR SER ARG SER ASN ALA GLN ARG GLN GLU SEQRES 5 A 320 ILE SER ALA ALA PHE LYS THR LEU PHE GLY ARG ASP LEU SEQRES 6 A 320 LEU ASP ASP LEU LYS SER GLU LEU THR GLY LYS PHE GLU SEQRES 7 A 320 LYS LEU ILE VAL ALA LEU MET LYS PRO SER ARG LEU TYR SEQRES 8 A 320 ASP ALA TYR GLU LEU LYS HIS ALA LEU LYS GLY ALA GLY SEQRES 9 A 320 THR ASN GLU LYS VAL LEU THR GLU ILE ILE ALA SER ARG SEQRES 10 A 320 THR PRO GLU GLU LEU ARG ALA ILE LYS GLN VAL TYR GLU SEQRES 11 A 320 GLU GLU TYR GLY SER SER LEU GLU ASP ASP VAL VAL GLY SEQRES 12 A 320 ASP THR SER GLY TYR TYR GLN ARG MET LEU VAL VAL LEU SEQRES 13 A 320 LEU GLN ALA ASN ARG ASP PRO ASP ALA GLY ILE ASP GLU SEQRES 14 A 320 ALA GLN VAL GLU GLN ASP ALA GLN ALA LEU PHE GLN ALA SEQRES 15 A 320 GLY GLU LEU LYS TRP GLY THR ASP GLU GLU LYS PHE ILE SEQRES 16 A 320 THR ILE PHE GLY THR ARG SER VAL SER HIS LEU ARG LYS SEQRES 17 A 320 VAL PHE ASP LYS TYR MET THR ILE SER GLY PHE GLN ILE SEQRES 18 A 320 GLU GLU THR ILE ASP ARG GLU THR SER GLY ASN LEU GLU SEQRES 19 A 320 GLN LEU LEU LEU ALA VAL VAL LYS SER ILE ARG SER ILE SEQRES 20 A 320 PRO ALA TYR LEU ALA GLU THR LEU TYR TYR ALA MET LYS SEQRES 21 A 320 GLY ALA GLY THR ASP ASP HIS THR LEU ILE ARG VAL MET SEQRES 22 A 320 VAL SER ARG SER GLU ILE ASP LEU PHE ASN ILE ARG LYS SEQRES 23 A 320 GLU PHE ARG LYS ASN PHE ALA THR SER LEU TYR SER MET SEQRES 24 A 320 ILE LYS GLY ASP THR SER GLY ASP TYR LYS LYS ALA LEU SEQRES 25 A 320 LEU LEU LEU CYS GLY GLU ASP ASP HET CA A 321 1 HET CA A 322 1 HET CA A 323 1 HET CA A 324 1 HET CA A 325 1 HET SO4 A 550 5 HET SO4 A 551 5 HETNAM CA CALCIUM ION HETNAM SO4 SULFATE ION FORMUL 2 CA 5(CA 2+) FORMUL 7 SO4 2(O4 S 2-) FORMUL 9 HOH *202(H2 O) HELIX 1 1 ASP A 16 LYS A 29 1 14 HELIX 2 2 ASP A 34 THR A 43 1 10 HELIX 3 3 SER A 46 GLY A 62 1 17 HELIX 4 4 ASP A 64 LEU A 73 1 10 HELIX 5 5 THR A 74 LYS A 86 1 13 HELIX 6 6 PRO A 87 LYS A 101 1 15 HELIX 7 7 ASN A 106 ARG A 117 1 12 HELIX 8 8 THR A 118 GLY A 134 1 17 HELIX 9 9 SER A 136 THR A 145 1 10 HELIX 10 10 SER A 146 GLN A 158 1 13 HELIX 11 11 ASP A 168 LEU A 185 1 18 HELIX 12 12 ASP A 190 ARG A 201 1 12 HELIX 13 13 SER A 202 GLY A 218 1 17 HELIX 14 14 GLN A 220 ILE A 225 5 6 HELIX 15 15 GLY A 231 SER A 246 1 16 HELIX 16 16 SER A 246 LYS A 260 1 15 HELIX 17 17 ASP A 265 ARG A 276 1 12 HELIX 18 18 ASP A 280 ALA A 293 1 14 HELIX 19 19 SER A 295 THR A 304 1 10 HELIX 20 20 SER A 305 GLY A 317 1 13 LINK O MET A 28 CA CA A 323 1555 1555 2.44 LINK O GLY A 30 CA CA A 323 1555 1555 2.36 LINK O GLY A 32 CA CA A 323 1555 1555 2.44 LINK O THR A 33 CA CA A 324 1555 1555 2.46 LINK OE1 GLU A 35 CA CA A 324 1555 1555 2.50 LINK OE2 GLU A 35 CA CA A 324 1555 1555 2.75 LINK O LYS A 70 CA CA A 325 1555 1555 2.45 LINK OE2 GLU A 72 CA CA A 323 1555 1555 2.50 LINK OE1 GLU A 72 CA CA A 323 1555 1555 2.46 LINK O LEU A 73 CA CA A 325 1555 1555 2.40 LINK OE1 GLU A 78 CA CA A 325 1555 1555 2.62 LINK O LEU A 100 CA CA A 321 1555 1555 2.42 LINK O GLY A 102 CA CA A 321 1555 1555 2.35 LINK O GLY A 104 CA CA A 321 1555 1555 2.43 LINK OD1 ASP A 144 CA CA A 321 1555 1555 3.00 LINK OD2 ASP A 144 CA CA A 321 1555 1555 2.46 LINK O MET A 259 CA CA A 322 1555 1555 2.49 LINK O GLY A 261 CA CA A 322 1555 1555 2.46 LINK O GLY A 263 CA CA A 322 1555 1555 2.36 LINK OD1 ASP A 303 CA CA A 322 1555 1555 2.59 LINK OD2 ASP A 303 CA CA A 322 1555 1555 2.71 LINK CA CA A 321 O HOH A 478 1555 1555 2.37 LINK CA CA A 321 O HOH A 481 1555 1555 2.38 LINK CA CA A 322 O HOH A 483 1555 1555 2.40 LINK CA CA A 323 O HOH A 403 1555 1555 2.97 LINK CA CA A 323 O HOH A 706 1555 1555 2.39 LINK CA CA A 324 O HOH A 498 1555 1555 2.57 LINK CA CA A 324 O HOH A 499 1555 1555 2.52 LINK CA CA A 324 O HOH A 500 1555 1555 2.59 LINK CA CA A 325 O HOH A 605 1555 1555 3.20 SITE 1 AC1 6 LEU A 100 GLY A 102 GLY A 104 ASP A 144 SITE 2 AC1 6 HOH A 478 HOH A 481 SITE 1 AC2 5 MET A 259 GLY A 261 GLY A 263 ASP A 303 SITE 2 AC2 5 HOH A 483 SITE 1 AC3 6 MET A 28 GLY A 30 GLY A 32 GLU A 72 SITE 2 AC3 6 HOH A 403 HOH A 706 SITE 1 AC4 5 THR A 33 GLU A 35 HOH A 498 HOH A 499 SITE 2 AC4 5 HOH A 500 SITE 1 AC5 3 LYS A 70 LEU A 73 GLU A 78 SITE 1 AC6 5 ARG A 25 GLY A 30 ARG A 63 HOH A 477 SITE 2 AC6 5 HOH A 706 SITE 1 AC7 5 ARG A 285 LYS A 286 HOH A 643 HOH A 650 SITE 2 AC7 5 HOH A 655 CRYST1 99.700 99.700 96.350 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.577350 0.000000 0.00000 ORIGX2 0.000000 1.154701 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010030 0.005791 0.000000 0.00000 SCALE2 0.000000 0.011582 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010379 0.00000