PDB Short entry for 1B98 HEADER HORMONE/GROWTH FACTOR 22-FEB-99 1B98 TITLE NEUROTROPHIN 4 (HOMODIMER) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (NEUROTROPHIN-4); COMPND 3 CHAIN: A, M; COMPND 4 FRAGMENT: PRECURSOR RESIDUES 81-210; COMPND 5 SYNONYM: NT4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 OTHER_DETAILS: SUPPLIED BY REGENERON PHARMACUTICALS KEYWDS TARGET-DERIVED SURVIVAL FACTOR, NEUROTROPHIN 4, NEUROTROPHIN 5, KEYWDS 2 HORMONE-GROWTH FACTOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.C.ROBINSON,C.RADZIEJEWSKI,D.I.STUART,E.Y.JONES,S.CHOE REVDAT 6 03-APR-24 1B98 1 REMARK REVDAT 5 27-DEC-23 1B98 1 REMARK REVDAT 4 24-FEB-09 1B98 1 VERSN REVDAT 3 07-JAN-00 1B98 3 SEQRES DBREF JRNL HEADER REVDAT 3 2 3 REMARK REVDAT 2 09-MAR-99 1B98 3 JRNL REVDAT 1 26-FEB-99 1B98 0 JRNL AUTH R.C.ROBINSON,C.RADZIEJEWSKI,G.SPRAGGON,J.GREENWALD, JRNL AUTH 2 M.R.KOSTURA,L.D.BURTNICK,D.I.STUART,S.CHOE,E.Y.JONES JRNL TITL THE STRUCTURES OF THE NEUROTROPHIN 4 HOMODIMER AND THE JRNL TITL 2 BRAIN-DERIVED NEUROTROPHIC FACTOR/NEUROTROPHIN 4 HETERODIMER JRNL TITL 3 REVEAL A COMMON TRK-BINDING SITE. JRNL REF PROTEIN SCI. V. 8 2589 1999 JRNL REFN ISSN 0961-8368 JRNL PMID 10631974 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.C.ROBINSON,C.RADZIEJEWSKI,D.I.STUART,E.Y.JONES REMARK 1 TITL STRUCTURE OF THE BRAIN-DERIVED NEUROTROPHIC REMARK 1 TITL 2 FACTOR/NEUROTROPHIN 3 HETERODIMER REMARK 1 REF BIOCHEMISTRY V. 34 4139 1995 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 2 REMARK 1 AUTH C.RADZIEJEWSKI,R.C.ROBINSON REMARK 1 TITL HETERODIMERS OF THE NEUROTROPHIC FACTORS: FORMATION, REMARK 1 TITL 2 ISOLATION, AND DIFFERENTIAL STABILITY REMARK 1 REF BIOCHEMISTRY V. 32 13350 1993 REMARK 1 REFN ISSN 0006-2960 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 3 NUMBER OF REFLECTIONS : 8334 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.336 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1621 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 49 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.015 ; NULL REMARK 3 ANGLE DISTANCE (A) : 0.048 ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1B98 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-FEB-99. REMARK 100 THE DEPOSITION ID IS D_1000000520. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL1-5 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.970 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7858 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.03100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NT4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, PIPES, PH 6.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.40000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, M REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 VAL A 2 REMARK 465 SER A 3 REMARK 465 GLU A 4 REMARK 465 THR A 5 REMARK 465 ALA A 6 REMARK 465 PRO A 7 REMARK 465 ALA A 8 REMARK 465 SER A 9 REMARK 465 ARG A 10 REMARK 465 ARG A 11 REMARK 465 GLY A 12 REMARK 465 PRO A 45 REMARK 465 ALA A 46 REMARK 465 ALA A 47 REMARK 465 GLY A 48 REMARK 465 GLY A 49 REMARK 465 SER A 50 REMARK 465 PRO A 51 REMARK 465 ASP A 103 REMARK 465 ALA A 104 REMARK 465 GLN A 105 REMARK 465 GLY A 106 REMARK 465 ARG A 107 REMARK 465 GLY A 128 REMARK 465 ARG A 129 REMARK 465 ALA A 130 REMARK 465 GLY M 1 REMARK 465 VAL M 2 REMARK 465 SER M 3 REMARK 465 GLU M 4 REMARK 465 THR M 5 REMARK 465 ALA M 6 REMARK 465 PRO M 7 REMARK 465 ALA M 8 REMARK 465 SER M 9 REMARK 465 ARG M 10 REMARK 465 ASN M 65 REMARK 465 ALA M 66 REMARK 465 GLU M 67 REMARK 465 THR M 127 REMARK 465 GLY M 128 REMARK 465 ARG M 129 REMARK 465 ALA M 130 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 52 CG CD1 CD2 REMARK 470 ARG A 53 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 68 CG CD OE1 OE2 REMARK 470 ARG A 126 CG CD NE CZ NH1 NH2 REMARK 470 ARG M 11 CG CD NE CZ NH1 NH2 REMARK 470 GLU M 68 CB CG CD OE1 OE2 REMARK 470 ARG M 126 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ARG M 107 O HOH M 154 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 16 N - CA - CB ANGL. DEV. = -14.3 DEGREES REMARK 500 VAL A 16 CG1 - CB - CG2 ANGL. DEV. = 10.0 DEGREES REMARK 500 ASP A 26 CB - CG - OD2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ARG A 28 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 28 NE - CZ - NH2 ANGL. DEV. = -5.0 DEGREES REMARK 500 ARG A 53 C - N - CA ANGL. DEV. = 16.4 DEGREES REMARK 500 TYR A 55 CA - CB - CG ANGL. DEV. = 17.7 DEGREES REMARK 500 TYR A 55 CB - CG - CD2 ANGL. DEV. = -3.9 DEGREES REMARK 500 TYR A 55 CB - CG - CD1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG A 60 CD - NE - CZ ANGL. DEV. = 16.8 DEGREES REMARK 500 ARG A 60 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 60 NE - CZ - NH2 ANGL. DEV. = -7.7 DEGREES REMARK 500 GLU A 67 N - CA - CB ANGL. DEV. = 11.8 DEGREES REMARK 500 ARG A 79 CD - NE - CZ ANGL. DEV. = 14.6 DEGREES REMARK 500 ARG A 79 NE - CZ - NH1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG A 79 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 GLY A 80 CA - C - O ANGL. DEV. = -11.1 DEGREES REMARK 500 ARG A 83 CD - NE - CZ ANGL. DEV. = 17.8 DEGREES REMARK 500 ARG A 83 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG A 84 CD - NE - CZ ANGL. DEV. = 9.6 DEGREES REMARK 500 ARG A 98 CD - NE - CZ ANGL. DEV. = 21.9 DEGREES REMARK 500 LEU A 100 N - CA - CB ANGL. DEV. = 12.2 DEGREES REMARK 500 ARG A 111 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 114 NE - CZ - NH1 ANGL. DEV. = -3.0 DEGREES REMARK 500 SER A 125 CB - CA - C ANGL. DEV. = -12.5 DEGREES REMARK 500 SER A 125 N - CA - CB ANGL. DEV. = -13.4 DEGREES REMARK 500 SER A 125 N - CA - C ANGL. DEV. = 20.6 DEGREES REMARK 500 ASP M 26 CB - CG - OD1 ANGL. DEV. = 9.3 DEGREES REMARK 500 ARG M 27 NE - CZ - NH2 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG M 28 NE - CZ - NH2 ANGL. DEV. = 7.1 DEGREES REMARK 500 ASP M 32 CB - CG - OD1 ANGL. DEV. = 8.7 DEGREES REMARK 500 ASP M 32 CB - CG - OD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 LEU M 33 CB - CG - CD1 ANGL. DEV. = 12.3 DEGREES REMARK 500 ARG M 36 CG - CD - NE ANGL. DEV. = 16.6 DEGREES REMARK 500 ARG M 36 CD - NE - CZ ANGL. DEV. = 18.2 DEGREES REMARK 500 ARG M 36 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 GLU M 37 OE1 - CD - OE2 ANGL. DEV. = 11.7 DEGREES REMARK 500 GLU M 37 O - C - N ANGL. DEV. = -10.4 DEGREES REMARK 500 ARG M 79 CG - CD - NE ANGL. DEV. = 14.1 DEGREES REMARK 500 ARG M 79 NE - CZ - NH1 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG M 79 NE - CZ - NH2 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG M 83 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 LYS M 91 CB - CA - C ANGL. DEV. = -12.8 DEGREES REMARK 500 ARG M 98 CD - NE - CZ ANGL. DEV. = 15.8 DEGREES REMARK 500 ARG M 98 NH1 - CZ - NH2 ANGL. DEV. = -9.3 DEGREES REMARK 500 ARG M 98 NE - CZ - NH1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP M 103 CA - CB - CG ANGL. DEV. = -20.1 DEGREES REMARK 500 ASP M 103 N - CA - C ANGL. DEV. = 23.7 DEGREES REMARK 500 ASP M 103 CA - C - O ANGL. DEV. = 21.8 DEGREES REMARK 500 ASP M 103 O - C - N ANGL. DEV. = -19.2 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 56 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 125 -154.27 -125.48 REMARK 500 ARG A 126 49.64 -174.02 REMARK 500 ALA M 46 70.08 -153.06 REMARK 500 PRO M 71 -167.45 -74.31 REMARK 500 ASP M 103 120.18 179.96 REMARK 500 ALA M 104 -140.70 161.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 CYS A 17 14.46 REMARK 500 SER A 21 -13.21 REMARK 500 GLU M 37 12.59 REMARK 500 TYR M 55 11.90 REMARK 500 ALA M 99 10.49 REMARK 500 ASP M 103 10.81 REMARK 500 ALA M 104 -11.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 200 DBREF 1B98 A 1 130 UNP P34130 NT5_HUMAN 81 210 DBREF 1B98 M 1 130 UNP P34130 NT5_HUMAN 81 210 SEQRES 1 A 130 GLY VAL SER GLU THR ALA PRO ALA SER ARG ARG GLY GLU SEQRES 2 A 130 LEU ALA VAL CYS ASP ALA VAL SER GLY TRP VAL THR ASP SEQRES 3 A 130 ARG ARG THR ALA VAL ASP LEU ARG GLY ARG GLU VAL GLU SEQRES 4 A 130 VAL LEU GLY GLU VAL PRO ALA ALA GLY GLY SER PRO LEU SEQRES 5 A 130 ARG GLN TYR PHE PHE GLU THR ARG CYS LYS ALA ASP ASN SEQRES 6 A 130 ALA GLU GLU GLY GLY PRO GLY ALA GLY GLY GLY GLY CYS SEQRES 7 A 130 ARG GLY VAL ASP ARG ARG HIS TRP VAL SER GLU CYS LYS SEQRES 8 A 130 ALA LYS GLN SER TYR VAL ARG ALA LEU THR ALA ASP ALA SEQRES 9 A 130 GLN GLY ARG VAL GLY TRP ARG TRP ILE ARG ILE ASP THR SEQRES 10 A 130 ALA CYS VAL CYS THR LEU LEU SER ARG THR GLY ARG ALA SEQRES 1 M 130 GLY VAL SER GLU THR ALA PRO ALA SER ARG ARG GLY GLU SEQRES 2 M 130 LEU ALA VAL CYS ASP ALA VAL SER GLY TRP VAL THR ASP SEQRES 3 M 130 ARG ARG THR ALA VAL ASP LEU ARG GLY ARG GLU VAL GLU SEQRES 4 M 130 VAL LEU GLY GLU VAL PRO ALA ALA GLY GLY SER PRO LEU SEQRES 5 M 130 ARG GLN TYR PHE PHE GLU THR ARG CYS LYS ALA ASP ASN SEQRES 6 M 130 ALA GLU GLU GLY GLY PRO GLY ALA GLY GLY GLY GLY CYS SEQRES 7 M 130 ARG GLY VAL ASP ARG ARG HIS TRP VAL SER GLU CYS LYS SEQRES 8 M 130 ALA LYS GLN SER TYR VAL ARG ALA LEU THR ALA ASP ALA SEQRES 9 M 130 GLN GLY ARG VAL GLY TRP ARG TRP ILE ARG ILE ASP THR SEQRES 10 M 130 ALA CYS VAL CYS THR LEU LEU SER ARG THR GLY ARG ALA HET CL A 200 1 HETNAM CL CHLORIDE ION FORMUL 3 CL CL 1- FORMUL 4 HOH *49(H2 O) SHEET 1 A 2 ALA A 19 VAL A 24 0 SHEET 2 A 2 PHE A 56 CYS A 61 -1 O PHE A 56 N VAL A 24 SHEET 1 B 5 THR A 29 VAL A 31 0 SHEET 2 B 5 GLU A 37 VAL A 40 -1 N VAL A 38 O ALA A 30 SHEET 3 B 5 SER A 88 ALA A 102 -1 N ALA A 102 O GLU A 39 SHEET 4 B 5 GLY A 109 LEU A 123 -1 O GLY A 109 N THR A 101 SHEET 5 B 5 LEU M 14 ALA M 15 -1 N LEU M 14 O LEU A 123 SHEET 1 C 2 ALA M 19 VAL M 24 0 SHEET 2 C 2 PHE M 56 CYS M 61 -1 O PHE M 56 N VAL M 24 SHEET 1 D 4 THR M 29 VAL M 31 0 SHEET 2 D 4 GLU M 37 VAL M 40 -1 N VAL M 38 O ALA M 30 SHEET 3 D 4 VAL M 87 ALA M 102 -1 N ALA M 102 O GLU M 39 SHEET 4 D 4 VAL M 108 SER M 125 -1 O GLY M 109 N THR M 101 SHEET 1 E 2 GLU M 43 VAL M 44 0 SHEET 2 E 2 LEU M 52 ARG M 53 -1 N LEU M 52 O VAL M 44 SSBOND 1 CYS A 17 CYS A 90 1555 1555 2.02 SSBOND 2 CYS A 61 CYS A 119 1555 1555 2.04 SSBOND 3 CYS A 78 CYS A 121 1555 1555 2.08 SSBOND 4 CYS M 17 CYS M 90 1555 1555 1.99 SSBOND 5 CYS M 61 CYS M 119 1555 1555 2.48 SSBOND 6 CYS M 78 CYS M 121 1555 1555 2.35 SITE 1 AC1 3 CYS A 121 CYS M 121 HOH M 134 CRYST1 43.800 50.800 53.000 90.00 109.40 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022831 0.000000 0.008040 0.00000 SCALE2 0.000000 0.019685 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020004 0.00000