PDB Short entry for 1BHI HEADER DNA-BINDING REGULATORY PROTEIN 09-JUN-98 1BHI TITLE STRUCTURE OF TRANSACTIVATION DOMAIN OF CRE-BP1/ATF-2, NMR, 20 TITLE 2 STRUCTURES COMPND MOL_ID: 1; COMPND 2 MOLECULE: CRE-BP1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZINC FINGER-LIKE SUBDOMAIN OF THE TRANSACTIVATION DOMAIN; COMPND 5 SYNONYM: ATF-2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CDNA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PAR2156NCO1 KEYWDS CRE BINDING PROTEIN, ATF-2, TRANSCRIPTIONAL ACTIVATION DOMAIN, ZN KEYWDS 2 FINGER, DNA-BINDING REGULATORY PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.NAGADOI,K.NAKAZAWA,H.UDA,T.MAEKAWA,S.ISHII,Y.NISHIMURA REVDAT 4 16-FEB-22 1BHI 1 REMARK REVDAT 3 24-FEB-09 1BHI 1 VERSN REVDAT 2 01-APR-03 1BHI 1 JRNL REVDAT 1 15-JUN-99 1BHI 0 JRNL AUTH A.NAGADOI,K.NAKAZAWA,H.UDA,K.OKUNO,T.MAEKAWA,S.ISHII, JRNL AUTH 2 Y.NISHIMURA JRNL TITL SOLUTION STRUCTURE OF THE TRANSACTIVATION DOMAIN OF ATF-2 JRNL TITL 2 COMPRISING A ZINC FINGER-LIKE SUBDOMAIN AND A FLEXIBLE JRNL TITL 3 SUBDOMAIN. JRNL REF J.MOL.BIOL. V. 287 593 1999 JRNL REFN ISSN 0022-2836 JRNL PMID 10092462 JRNL DOI 10.1006/JMBI.1999.2620 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.W.HAI,F.LIU,W.J.COUKOS,M.R.GREEN REMARK 1 TITL ERRATUM. TRANSCRIPTION FACTOR ATF CDNA CLONES: AN EXTENSIVE REMARK 1 TITL 2 FAMILY OF LEUCINE ZIPPER PROTEINS ABLE TO SELECTIVELY FORM REMARK 1 TITL 3 DNA-BINDING HETERODIMERS REMARK 1 REF GENES DEV. V. 4 682 1990 REMARK 1 REFN ISSN 0890-9369 REMARK 1 REFERENCE 2 REMARK 1 AUTH T.W.HAI,F.LIU,W.J.COUKOS,M.R.GREEN REMARK 1 TITL TRANSCRIPTION FACTOR ATF CDNA CLONES: AN EXTENSIVE FAMILY OF REMARK 1 TITL 2 LEUCINE ZIPPER PROTEINS ABLE TO SELECTIVELY FORM DNA-BINDING REMARK 1 TITL 3 HETERODIMERS REMARK 1 REF GENES DEV. V. 3 2083 1989 REMARK 1 REFN ISSN 0890-9369 REMARK 1 REFERENCE 3 REMARK 1 AUTH T.MAEKAWA,H.SAKURA,C.KANEI-ISHII,T.SUDO,T.YOSHIMURA, REMARK 1 AUTH 2 J.FUJISAWA,M.YOSHIDA,S.ISHII REMARK 1 TITL LEUCINE ZIPPER STRUCTURE OF THE PROTEIN CRE-BP1 BINDING TO REMARK 1 TITL 2 THE CYCLIC AMP RESPONSE ELEMENT IN BRAIN REMARK 1 REF EMBO J. V. 8 2023 1989 REMARK 1 REFN ISSN 0261-4189 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : EMBOSS REMARK 3 AUTHORS : NAKAI,KIDERA,NAKAMURA REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1BHI COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000171764. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 6.3 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX-600 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : EMBOSS REMARK 210 METHOD USED : SIMULATED ANNEALING, ENERGY REMARK 210 MINIMIZATION REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : THE 20 FINAL STRUCTURES REMARK 210 EXHIBITED NO DISTANCE RESTRAINT REMARK 210 VIOLATIONS GREATER THAN 0.1 REMARK 210 ANGSTROMS AND DIHEDRAL ANGLE REMARK 210 VIOLATIONS GREATER THAN 6.0 REMARK 210 DEGREES. REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: THE STRUCTURES OF N- AND C-TERMINI OF THE PEPTIDE FRAGMENT REMARK 210 (MET 1 - PRO 6 AND LYS 36 - GLY 38) WERE DISORDERED AMONG THE 20 REMARK 210 STRUCTURES. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 3 78.85 -118.77 REMARK 500 1 LYS A 5 76.02 57.45 REMARK 500 2 SER A 2 -127.02 55.80 REMARK 500 2 ASP A 4 -77.02 65.51 REMARK 500 2 PRO A 12 -75.00 -67.13 REMARK 500 2 LEU A 35 136.96 69.62 REMARK 500 3 ASP A 4 97.49 55.72 REMARK 500 3 LYS A 5 153.38 69.83 REMARK 500 3 PRO A 6 -171.04 -65.64 REMARK 500 3 THR A 34 72.04 44.59 REMARK 500 3 LEU A 35 64.61 66.54 REMARK 500 3 LYS A 36 -51.27 -152.65 REMARK 500 3 PHE A 37 26.42 -155.18 REMARK 500 4 CYS A 9 94.29 -68.64 REMARK 500 4 PRO A 12 -76.79 -67.49 REMARK 500 5 SER A 2 -53.64 76.28 REMARK 500 5 THR A 10 108.32 -54.12 REMARK 500 5 PRO A 12 -78.80 -69.74 REMARK 500 5 CYS A 14 -72.91 -151.35 REMARK 500 5 THR A 34 -59.24 -134.55 REMARK 500 5 LYS A 36 -162.51 48.17 REMARK 500 5 PHE A 37 -48.52 -158.77 REMARK 500 6 MET A 33 45.49 -77.00 REMARK 500 6 LEU A 35 32.15 -149.05 REMARK 500 7 PRO A 12 -73.05 -66.84 REMARK 500 8 ASP A 4 -109.23 43.79 REMARK 500 8 CYS A 14 45.79 -84.88 REMARK 500 8 LEU A 35 77.23 -119.83 REMARK 500 8 PHE A 37 -52.46 -150.10 REMARK 500 9 PRO A 12 -80.65 -69.41 REMARK 500 9 CYS A 14 -75.15 -152.80 REMARK 500 9 THR A 34 -134.98 -168.11 REMARK 500 9 LEU A 35 48.82 -142.78 REMARK 500 10 CYS A 14 -70.52 -69.39 REMARK 500 10 LEU A 35 71.27 -166.76 REMARK 500 10 LYS A 36 91.70 -163.27 REMARK 500 11 ASP A 3 166.98 65.55 REMARK 500 11 LYS A 36 -105.93 -172.03 REMARK 500 11 PHE A 37 -149.27 -166.19 REMARK 500 12 PRO A 12 -70.09 -67.53 REMARK 500 12 CYS A 14 40.05 -156.84 REMARK 500 12 LEU A 35 40.33 -152.53 REMARK 500 12 PHE A 37 -67.22 -159.91 REMARK 500 13 THR A 34 68.12 -151.58 REMARK 500 13 LYS A 36 109.20 -164.15 REMARK 500 14 ASP A 4 29.81 -140.28 REMARK 500 14 LYS A 5 71.04 48.28 REMARK 500 14 PRO A 12 -73.94 -67.33 REMARK 500 14 THR A 34 -25.85 174.69 REMARK 500 14 PHE A 37 -51.32 75.88 REMARK 500 REMARK 500 THIS ENTRY HAS 70 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1BHI A 1 38 UNP P15336 ATF2_HUMAN 1 38 SEQRES 1 A 38 MET SER ASP ASP LYS PRO PHE LEU CYS THR ALA PRO GLY SEQRES 2 A 38 CYS GLY GLN ARG PHE THR ASN GLU ASP HIS LEU ALA VAL SEQRES 3 A 38 HIS LYS HIS LYS HIS GLU MET THR LEU LYS PHE GLY HELIX 1 H1 GLU A 21 GLU A 32 1 12 SHEET 1 A 2 PHE A 7 CYS A 9 0 SHEET 2 A 2 GLN A 16 PHE A 18 -1 N PHE A 18 O PHE A 7 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000