PDB Short entry for 1BHM HEADER HYDROLASE/DNA 12-JUL-95 1BHM TITLE RESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNA CAVEAT 1BHM INCORRECT CHIRAL CENTER(S) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*TP*AP*TP*GP*GP*AP*TP*CP*CP*AP*TP*A)-3'); COMPND 3 CHAIN: C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PROTEIN (BAMHI (E.C.3.1.21.4)); COMPND 7 CHAIN: A, B; COMPND 8 SYNONYM: R. BAMHI; COMPND 9 EC: 3.1.21.4; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 ORGANISM_SCIENTIFIC: BACILLUS AMYLOLIQUEFACIENS; SOURCE 5 ORGANISM_TAXID: 1390 KEYWDS HYDROLASE, COMPLEX (ENDONUCLEASE-DNA), NUCLEASE, HYDROLASE-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.K.AGGARWAL,M.NEWMAN REVDAT 3 07-FEB-24 1BHM 1 REMARK REVDAT 2 24-FEB-09 1BHM 1 VERSN REVDAT 1 12-JUL-95 1BHM 0 JRNL AUTH M.NEWMAN,T.STRZELECKA,L.F.DORNER,I.SCHILDKRAUT,A.K.AGGARWAL JRNL TITL STRUCTURE OF BAM HI ENDONUCLEASE BOUND TO DNA: PARTIAL JRNL TITL 2 FOLDING AND UNFOLDING ON DNA BINDING. JRNL REF SCIENCE V. 269 656 1995 JRNL REFN ISSN 0036-8075 JRNL PMID 7624794 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 28405 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3206 REMARK 3 NUCLEIC ACID ATOMS : 465 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 215 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.018 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : 2.800 ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THE 3' ADENINE RESIDUE ON ONE OF THE DNA STRANDS IS REMARK 3 DISORDERED. REMARK 4 REMARK 4 1BHM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB. REMARK 100 THE DEPOSITION ID IS D_1000171767. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30078 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 54.40000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.40000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.95000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 34.40000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 54.40000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.95000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT CONTAINS TWO BAMHI REMARK 300 MONOMERS (CHAINS A AND B) BOUND TO A PALINDROMIC 12 BASE REMARK 300 PAIR DNA COMPLEX. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DA D 12 REMARK 465 SER A 199 REMARK 465 LYS A 200 REMARK 465 ARG A 201 REMARK 465 SER A 202 REMARK 465 ILE A 203 REMARK 465 LYS A 204 REMARK 465 LYS A 205 REMARK 465 TRP A 206 REMARK 465 LYS A 207 REMARK 465 ASP A 208 REMARK 465 LYS A 209 REMARK 465 VAL A 210 REMARK 465 GLU A 211 REMARK 465 ASN A 212 REMARK 465 LYS A 213 REMARK 465 LYS B 209 REMARK 465 VAL B 210 REMARK 465 GLU B 211 REMARK 465 ASN B 212 REMARK 465 LYS B 213 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 20 CG CD CE NZ REMARK 470 ASN A 27 CG OD1 ND2 REMARK 470 LYS A 84 CG CD CE NZ REMARK 470 GLU A 86 CG CD OE1 OE2 REMARK 470 LYS A 88 CG CD CE NZ REMARK 470 ILE A 100 CG1 CG2 CD1 REMARK 470 GLU A 101 CG CD OE1 OE2 REMARK 470 ASN A 102 CG OD1 ND2 REMARK 470 SER A 103 OG REMARK 470 LEU A 105 CG CD1 CD2 REMARK 470 LYS A 132 CG CD CE NZ REMARK 470 SER A 195 OG REMARK 470 LYS B 18 CG CD CE NZ REMARK 470 LYS B 20 CG CD CE NZ REMARK 470 LYS B 43 CG CD CE NZ REMARK 470 LYS B 84 CG CD CE NZ REMARK 470 GLU B 86 CG CD OE1 OE2 REMARK 470 LYS B 88 CG CD CE NZ REMARK 470 GLU B 170 CG CD OE1 OE2 REMARK 470 ASN B 187 CG OD1 ND2 REMARK 470 LYS B 200 CG CD CE NZ REMARK 470 LYS B 205 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT C 1 O3' DT C 1 C3' -0.043 REMARK 500 DG C 5 O5' DG C 5 C5' 0.096 REMARK 500 DG C 5 C5 DG C 5 C6 -0.062 REMARK 500 DG C 5 C5 DG C 5 N7 -0.042 REMARK 500 DC C 9 O3' DC C 9 C3' -0.056 REMARK 500 DT C 11 C2 DT C 11 N3 -0.051 REMARK 500 DT C 11 C5 DT C 11 C6 -0.089 REMARK 500 DT C 11 C6 DT C 11 N1 -0.046 REMARK 500 DT C 11 C5 DT C 11 C7 0.072 REMARK 500 DA C 12 P DA C 12 O5' 0.070 REMARK 500 DT D 3 O3' DT D 3 C3' -0.053 REMARK 500 DT D 3 C4 DT D 3 C5 -0.056 REMARK 500 DA D 6 C5' DA D 6 C4' 0.054 REMARK 500 DT D 7 C5 DT D 7 C6 -0.046 REMARK 500 DT D 7 C5 DT D 7 C7 0.038 REMARK 500 DT D 11 O3' DT D 11 C3' 0.106 REMARK 500 DT D 11 C5 DT D 11 C7 -0.049 REMARK 500 GLU A 2 CD GLU A 2 OE1 0.101 REMARK 500 GLU A 14 CD GLU A 14 OE2 0.073 REMARK 500 GLU A 28 CD GLU A 28 OE1 0.091 REMARK 500 GLU A 51 CD GLU A 51 OE1 0.073 REMARK 500 GLU A 62 CD GLU A 62 OE2 0.078 REMARK 500 GLU A 104 CD GLU A 104 OE1 0.084 REMARK 500 GLU A 113 CD GLU A 113 OE2 -0.084 REMARK 500 GLU A 167 CD GLU A 167 OE1 0.066 REMARK 500 GLU A 170 CD GLU A 170 OE1 0.090 REMARK 500 GLU A 182 CD GLU A 182 OE1 0.081 REMARK 500 GLU B 2 CD GLU B 2 OE1 0.076 REMARK 500 GLU B 4 CD GLU B 4 OE2 0.083 REMARK 500 GLU B 11 CD GLU B 11 OE1 0.068 REMARK 500 GLU B 14 CD GLU B 14 OE1 0.076 REMARK 500 GLU B 51 CD GLU B 51 OE1 0.070 REMARK 500 GLU B 62 CD GLU B 62 OE1 0.150 REMARK 500 GLU B 69 CD GLU B 69 OE1 0.073 REMARK 500 GLU B 98 CD GLU B 98 OE1 0.077 REMARK 500 GLU B 101 CD GLU B 101 OE1 0.082 REMARK 500 GLU B 104 CD GLU B 104 OE1 0.093 REMARK 500 GLU B 111 CD GLU B 111 OE1 -0.070 REMARK 500 GLU B 113 CD GLU B 113 OE1 -0.085 REMARK 500 GLU B 135 CD GLU B 135 OE1 0.108 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA C 2 O4' - C1' - N9 ANGL. DEV. = -6.8 DEGREES REMARK 500 DT C 3 O4' - C1' - N1 ANGL. DEV. = 3.8 DEGREES REMARK 500 DG C 5 OP1 - P - OP2 ANGL. DEV. = 9.5 DEGREES REMARK 500 DG C 5 P - O5' - C5' ANGL. DEV. = -26.0 DEGREES REMARK 500 DG C 5 O4' - C1' - N9 ANGL. DEV. = -5.7 DEGREES REMARK 500 DG C 5 C2 - N3 - C4 ANGL. DEV. = -4.3 DEGREES REMARK 500 DG C 5 C3' - O3' - P ANGL. DEV. = 10.1 DEGREES REMARK 500 DA C 6 C3' - O3' - P ANGL. DEV. = 7.9 DEGREES REMARK 500 DC C 8 O4' - C1' - C2' ANGL. DEV. = -4.8 DEGREES REMARK 500 DC C 8 N3 - C4 - C5 ANGL. DEV. = 3.0 DEGREES REMARK 500 DC C 8 C6 - N1 - C1' ANGL. DEV. = -11.3 DEGREES REMARK 500 DC C 8 C2 - N1 - C1' ANGL. DEV. = 10.7 DEGREES REMARK 500 DC C 8 C3' - O3' - P ANGL. DEV. = 10.4 DEGREES REMARK 500 DC C 9 O4' - C1' - N1 ANGL. DEV. = -5.6 DEGREES REMARK 500 DA C 10 O4' - C1' - N9 ANGL. DEV. = 4.1 DEGREES REMARK 500 DT C 11 C6 - C5 - C7 ANGL. DEV. = -3.7 DEGREES REMARK 500 DT C 11 C2 - N1 - C1' ANGL. DEV. = -10.1 DEGREES REMARK 500 DA C 12 O4' - C1' - N9 ANGL. DEV. = 5.7 DEGREES REMARK 500 DA C 12 C5 - N7 - C8 ANGL. DEV. = -3.2 DEGREES REMARK 500 DA C 12 N1 - C6 - N6 ANGL. DEV. = 4.4 DEGREES REMARK 500 DT D 1 C4 - C5 - C7 ANGL. DEV. = -5.4 DEGREES REMARK 500 DT D 1 C6 - C5 - C7 ANGL. DEV. = 4.5 DEGREES REMARK 500 DT D 1 C6 - N1 - C1' ANGL. DEV. = -11.9 DEGREES REMARK 500 DT D 3 O4' - C1' - C2' ANGL. DEV. = -6.3 DEGREES REMARK 500 DT D 3 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 DT D 3 N1 - C2 - N3 ANGL. DEV. = -4.2 DEGREES REMARK 500 DT D 3 C3' - O3' - P ANGL. DEV. = 8.1 DEGREES REMARK 500 DG D 4 C3' - O3' - P ANGL. DEV. = 11.4 DEGREES REMARK 500 DG D 5 C3' - O3' - P ANGL. DEV. = 8.6 DEGREES REMARK 500 DA D 6 O4' - C4' - C3' ANGL. DEV. = -2.6 DEGREES REMARK 500 DA D 6 O4' - C1' - C2' ANGL. DEV. = -6.1 DEGREES REMARK 500 DA D 6 O4' - C1' - N9 ANGL. DEV. = -5.1 DEGREES REMARK 500 DA D 6 N1 - C6 - N6 ANGL. DEV. = 5.0 DEGREES REMARK 500 DA D 6 C5 - C6 - N6 ANGL. DEV. = -6.4 DEGREES REMARK 500 DT D 7 P - O5' - C5' ANGL. DEV. = -11.7 DEGREES REMARK 500 DC D 9 O4' - C1' - N1 ANGL. DEV. = -5.1 DEGREES REMARK 500 DA D 10 O4' - C1' - C2' ANGL. DEV. = -6.3 DEGREES REMARK 500 DA D 10 O4' - C1' - N9 ANGL. DEV. = -5.1 DEGREES REMARK 500 DT D 11 N3 - C2 - O2 ANGL. DEV. = -3.7 DEGREES REMARK 500 DT D 11 C6 - C5 - C7 ANGL. DEV. = -4.0 DEGREES REMARK 500 DT D 11 C6 - N1 - C1' ANGL. DEV. = 11.2 DEGREES REMARK 500 DT D 11 C2 - N1 - C1' ANGL. DEV. = -12.6 DEGREES REMARK 500 GLU A 2 CB - CA - C ANGL. DEV. = -14.8 DEGREES REMARK 500 ASP A 94 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 107 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG A 122 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 MET A 198 N - CA - CB ANGL. DEV. = 13.9 DEGREES REMARK 500 ASP B 19 CB - CG - OD1 ANGL. DEV. = 8.5 DEGREES REMARK 500 ASP B 19 CB - CG - OD2 ANGL. DEV. = -9.2 DEGREES REMARK 500 TYR B 75 CB - CG - CD1 ANGL. DEV. = -3.7 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 55 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 49 41.23 -100.01 REMARK 500 GLU A 62 -70.13 -33.09 REMARK 500 GLU A 101 102.50 -162.00 REMARK 500 ASN A 102 -125.39 79.46 REMARK 500 ASN B 102 -118.28 57.10 REMARK 500 LYS B 207 7.91 -56.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 HOH A 236 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: CTA REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: CTB REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL DBREF 1BHM A 1 213 UNP P23940 T2BA_BACAM 1 213 DBREF 1BHM B 1 213 UNP P23940 T2BA_BACAM 1 213 DBREF 1BHM C 1 12 PDB 1BHM 1BHM 1 12 DBREF 1BHM D 1 12 PDB 1BHM 1BHM 1 12 SEQRES 1 C 12 DT DA DT DG DG DA DT DC DC DA DT DA SEQRES 1 D 12 DT DA DT DG DG DA DT DC DC DA DT DA SEQRES 1 A 213 MET GLU VAL GLU LYS GLU PHE ILE THR ASP GLU ALA LYS SEQRES 2 A 213 GLU LEU LEU SER LYS ASP LYS LEU ILE GLN GLN ALA TYR SEQRES 3 A 213 ASN GLU VAL LYS THR SER ILE CYS SER PRO ILE TRP PRO SEQRES 4 A 213 ALA THR SER LYS THR PHE THR ILE ASN ASN THR GLU LYS SEQRES 5 A 213 ASN CYS ASN GLY VAL VAL PRO ILE LYS GLU LEU CYS TYR SEQRES 6 A 213 THR LEU LEU GLU ASP THR TYR ASN TRP TYR ARG GLU LYS SEQRES 7 A 213 PRO LEU ASP ILE LEU LYS LEU GLU LYS LYS LYS GLY GLY SEQRES 8 A 213 PRO ILE ASP VAL TYR LYS GLU PHE ILE GLU ASN SER GLU SEQRES 9 A 213 LEU LYS ARG VAL GLY MET GLU PHE GLU THR GLY ASN ILE SEQRES 10 A 213 SER SER ALA HIS ARG SER MET ASN LYS LEU LEU LEU GLY SEQRES 11 A 213 LEU LYS HIS GLY GLU ILE ASP LEU ALA ILE ILE LEU MET SEQRES 12 A 213 PRO ILE LYS GLN LEU ALA TYR TYR LEU THR ASP ARG VAL SEQRES 13 A 213 THR ASN PHE GLU GLU LEU GLU PRO TYR PHE GLU LEU THR SEQRES 14 A 213 GLU GLY GLN PRO PHE ILE PHE ILE GLY PHE ASN ALA GLU SEQRES 15 A 213 ALA TYR ASN SER ASN VAL PRO LEU ILE PRO LYS GLY SER SEQRES 16 A 213 ASP GLY MET SER LYS ARG SER ILE LYS LYS TRP LYS ASP SEQRES 17 A 213 LYS VAL GLU ASN LYS SEQRES 1 B 213 MET GLU VAL GLU LYS GLU PHE ILE THR ASP GLU ALA LYS SEQRES 2 B 213 GLU LEU LEU SER LYS ASP LYS LEU ILE GLN GLN ALA TYR SEQRES 3 B 213 ASN GLU VAL LYS THR SER ILE CYS SER PRO ILE TRP PRO SEQRES 4 B 213 ALA THR SER LYS THR PHE THR ILE ASN ASN THR GLU LYS SEQRES 5 B 213 ASN CYS ASN GLY VAL VAL PRO ILE LYS GLU LEU CYS TYR SEQRES 6 B 213 THR LEU LEU GLU ASP THR TYR ASN TRP TYR ARG GLU LYS SEQRES 7 B 213 PRO LEU ASP ILE LEU LYS LEU GLU LYS LYS LYS GLY GLY SEQRES 8 B 213 PRO ILE ASP VAL TYR LYS GLU PHE ILE GLU ASN SER GLU SEQRES 9 B 213 LEU LYS ARG VAL GLY MET GLU PHE GLU THR GLY ASN ILE SEQRES 10 B 213 SER SER ALA HIS ARG SER MET ASN LYS LEU LEU LEU GLY SEQRES 11 B 213 LEU LYS HIS GLY GLU ILE ASP LEU ALA ILE ILE LEU MET SEQRES 12 B 213 PRO ILE LYS GLN LEU ALA TYR TYR LEU THR ASP ARG VAL SEQRES 13 B 213 THR ASN PHE GLU GLU LEU GLU PRO TYR PHE GLU LEU THR SEQRES 14 B 213 GLU GLY GLN PRO PHE ILE PHE ILE GLY PHE ASN ALA GLU SEQRES 15 B 213 ALA TYR ASN SER ASN VAL PRO LEU ILE PRO LYS GLY SER SEQRES 16 B 213 ASP GLY MET SER LYS ARG SER ILE LYS LYS TRP LYS ASP SEQRES 17 B 213 LYS VAL GLU ASN LYS FORMUL 5 HOH *215(H2 O) HELIX 1 AH1 ASP A 10 LEU A 16 1 7 HELIX 2 AH2 LYS A 20 CYS A 34 1 15 HELIX 3 AH3 VAL A 58 ASP A 70 1KINKED ON COMPLEX FORMATION 13 HELIX 4 A3A ILE A 8 LYS A 84 1INDUCED ON COMPLEX FORMATION 77 HELIX 5 AH4 ILE A 117 LYS A 132 1 16 HELIX 6 AH5 LYS A 146 ALA A 149 1 4 HELIX 7 AH6 PHE A 159 THR A 169 1KINKED BY PRO IN THE MIDDLE 11 HELIX 8 BH1 ASP B 10 LEU B 16 1 7 HELIX 9 BH2 LYS B 20 CYS B 34 1 15 HELIX 10 BH3 VAL B 58 ASP B 70 1KINKED ON COMPLEX FORMATION 13 HELIX 11 B3A ILE B 8 LYS B 84 1INDUCED ON COMPLEX FORMATION 77 HELIX 12 BH4 ILE B 117 LYS B 132 1 16 HELIX 13 BH5 LYS B 146 ALA B 149 1 4 HELIX 14 BH6 PHE B 159 THR B 169 1KINKED BY PRO IN THE MIDDLE 11 SHEET 1 AA 6 TYR A 75 ARG A 76 0 SHEET 2 AA 6 VAL A 95 GLU A 101 -1 SHEET 3 AA 6 GLU A 104 PHE A 112 -1 SHEET 4 AA 6 ASP A 137 PRO A 144 1 SHEET 5 AA 6 PHE A 174 ASN A 180 1 SHEET 6 AA 6 GLU A 2 ILE A 8 -1 SHEET 1 AB 2 THR A 46 ASN A 48 0 SHEET 2 AB 2 ALA A 183 ASN A 185 1 SHEET 1 BA 6 TYR B 75 ARG B 76 0 SHEET 2 BA 6 VAL B 95 GLU B 101 -1 SHEET 3 BA 6 GLU B 104 PHE B 112 -1 SHEET 4 BA 6 ASP B 137 PRO B 144 1 SHEET 5 BA 6 PHE B 174 ASN B 180 1 SHEET 6 BA 6 GLU B 2 ILE B 8 -1 SHEET 1 BB 2 THR B 46 ASN B 48 0 SHEET 2 BB 2 ALA B 183 ASN B 185 1 CISPEP 1 TRP A 38 PRO A 39 0 2.01 CISPEP 2 TRP B 38 PRO B 39 0 5.05 SITE 1 CTA 3 ASP A 94 GLU A 111 GLU A 113 SITE 1 CTB 3 ASP A 94 GLU A 111 GLU A 113 CRYST1 108.800 81.900 68.800 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009191 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012210 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014535 0.00000