PDB Short entry for 1BQF HEADER HORMONE/GROWTH FACTOR 09-AUG-98 1BQF TITLE GROWTH-BLOCKING PEPTIDE (GBP) FROM PSEUDALETIA SEPARATA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (GROWTH-BLOCKING PEPTIDE); COMPND 3 CHAIN: A; COMPND 4 OTHER_DETAILS: CHEMICALLY SYNTHESIZED SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: APANTELES KARIYAI; SOURCE 3 ORGANISM_TAXID: 7404; SOURCE 4 ORGAN: BRAIN; SOURCE 5 TISSUE: FAT BODY; SOURCE 6 OTHER_DETAILS: CHEMICALLY SYNTHESIZED KEYWDS GROWTH FACTOR, HORMONE-GROWTH FACTOR COMPLEX EXPDTA SOLUTION NMR NUMMDL 16 AUTHOR T.AIZAWA,N.FUJITANI,Y.HAYAKAWA,A.OHNISHI,T.OHKUBO,K.KWANO,K.HIKICHI, AUTHOR 2 K.NITTA REVDAT 7 27-DEC-23 1BQF 1 REMARK REVDAT 6 16-FEB-22 1BQF 1 REMARK REVDAT 5 24-FEB-09 1BQF 1 VERSN REVDAT 4 01-APR-03 1BQF 1 JRNL REVDAT 3 01-MAY-00 1BQF 1 COMPND SOURCE DBREF REVDAT 2 29-DEC-99 1BQF 4 HEADER COMPND REMARK JRNL REVDAT 2 2 4 ATOM SOURCE SEQRES REVDAT 1 09-DEC-98 1BQF 0 JRNL AUTH T.AIZAWA,N.FUJITANI,Y.HAYAKAWA,A.OHNISHI,T.OHKUBO,Y.KUMAKI, JRNL AUTH 2 K.KAWANO,K.HIKICHI,K.NITTA JRNL TITL SOLUTION STRUCTURE OF AN INSECT GROWTH FACTOR, JRNL TITL 2 GROWTH-BLOCKING PEPTIDE. JRNL REF J.BIOL.CHEM. V. 274 1887 1999 JRNL PUBL ROCKVILLE PIKE, BETHESDA, MD USA JRNL REFN ISSN 0021-9258 JRNL PMID 9890941 JRNL DOI 10.1074/JBC.274.4.1887 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 DISTANCE GEOMETRY AND SIMULATED ANNEALING (DGSA PROTOCOL IN X-PLOR REMARK 3 3.1 MANUAL, REMARK 3 AXEL T. BRUNGER) REMARK 4 REMARK 4 1BQF COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB. REMARK 100 THE DEPOSITION ID IS D_1000008028. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 4.4 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : COSY; TOCSY; NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : JNM-ALPHA 500 REMARK 210 SPECTROMETER MANUFACTURER : JEOL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR REMARK 210 METHOD USED : DISTANCE GEOMETRY AND SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 16 REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION AND REMARK 210 LOWEST TOTAL ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TWO DIMENSIONAL 1H NMR REMARK 210 SPECTROSCOPY. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 4 -150.92 -74.68 REMARK 500 1 THR A 22 67.78 -118.08 REMARK 500 1 PHE A 23 47.51 -99.15 REMARK 500 2 CYS A 7 -151.05 -99.07 REMARK 500 2 MET A 12 165.05 -44.39 REMARK 500 3 ASN A 2 151.65 177.22 REMARK 500 3 PHE A 3 112.82 65.10 REMARK 500 3 CYS A 7 -71.78 -94.00 REMARK 500 4 SER A 4 36.82 -98.10 REMARK 500 4 VAL A 8 170.89 -48.54 REMARK 500 4 ARG A 18 -160.78 -110.85 REMARK 500 5 PHE A 3 96.91 -166.64 REMARK 500 5 CYS A 7 -92.22 -89.73 REMARK 500 5 ARG A 18 -166.33 163.56 REMARK 500 5 THR A 22 42.15 -107.46 REMARK 500 6 PHE A 3 -74.82 -87.89 REMARK 500 6 SER A 4 -69.14 176.90 REMARK 500 6 THR A 22 43.84 -101.89 REMARK 500 6 TYR A 24 -178.63 60.57 REMARK 500 7 SER A 4 88.53 65.57 REMARK 500 7 CYS A 7 -150.43 -93.90 REMARK 500 7 THR A 22 54.17 -115.74 REMARK 500 7 PHE A 23 51.62 -116.24 REMARK 500 7 TYR A 24 172.10 -45.89 REMARK 500 8 PHE A 3 -86.94 -107.17 REMARK 500 8 CYS A 7 -142.87 -131.66 REMARK 500 8 ASP A 16 -74.70 -53.60 REMARK 500 8 ARG A 18 143.76 -173.53 REMARK 500 8 PHE A 23 54.41 -90.99 REMARK 500 8 TYR A 24 -93.06 56.50 REMARK 500 9 MET A 12 106.09 -51.64 REMARK 500 10 ASN A 2 48.24 -164.68 REMARK 500 10 PHE A 3 -72.16 -45.08 REMARK 500 10 SER A 4 -72.21 -165.06 REMARK 500 10 THR A 22 53.77 -140.50 REMARK 500 11 ASN A 2 -90.28 61.90 REMARK 500 11 SER A 4 -168.67 50.52 REMARK 500 11 VAL A 8 165.05 -43.93 REMARK 500 12 PHE A 3 70.50 58.56 REMARK 500 12 MET A 12 153.00 -43.84 REMARK 500 12 ARG A 18 -171.55 -178.83 REMARK 500 12 THR A 22 54.61 -97.38 REMARK 500 13 PHE A 23 88.89 -153.94 REMARK 500 14 ASN A 2 78.11 -111.37 REMARK 500 14 SER A 4 -46.49 -137.76 REMARK 500 14 CYS A 7 -66.98 -94.28 REMARK 500 14 ARG A 18 130.69 178.92 REMARK 500 14 TYR A 24 154.41 65.87 REMARK 500 15 MET A 12 108.09 -45.21 REMARK 500 15 TYR A 24 -157.07 -103.21 REMARK 500 REMARK 500 THIS ENTRY HAS 53 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 13 0.24 SIDE CHAIN REMARK 500 1 ARG A 18 0.29 SIDE CHAIN REMARK 500 2 ARG A 13 0.32 SIDE CHAIN REMARK 500 2 ARG A 18 0.27 SIDE CHAIN REMARK 500 3 ARG A 13 0.21 SIDE CHAIN REMARK 500 3 ARG A 18 0.31 SIDE CHAIN REMARK 500 4 ARG A 13 0.29 SIDE CHAIN REMARK 500 4 ARG A 18 0.18 SIDE CHAIN REMARK 500 5 ARG A 13 0.32 SIDE CHAIN REMARK 500 5 ARG A 18 0.29 SIDE CHAIN REMARK 500 6 ARG A 13 0.27 SIDE CHAIN REMARK 500 6 ARG A 18 0.28 SIDE CHAIN REMARK 500 7 ARG A 13 0.31 SIDE CHAIN REMARK 500 7 ARG A 18 0.16 SIDE CHAIN REMARK 500 8 ARG A 13 0.22 SIDE CHAIN REMARK 500 8 ARG A 18 0.32 SIDE CHAIN REMARK 500 9 ARG A 13 0.30 SIDE CHAIN REMARK 500 9 ARG A 18 0.13 SIDE CHAIN REMARK 500 10 ARG A 13 0.30 SIDE CHAIN REMARK 500 10 ARG A 18 0.22 SIDE CHAIN REMARK 500 11 ARG A 18 0.23 SIDE CHAIN REMARK 500 12 ARG A 13 0.24 SIDE CHAIN REMARK 500 12 ARG A 18 0.31 SIDE CHAIN REMARK 500 13 ARG A 13 0.09 SIDE CHAIN REMARK 500 14 ARG A 13 0.29 SIDE CHAIN REMARK 500 14 ARG A 18 0.29 SIDE CHAIN REMARK 500 15 ARG A 13 0.32 SIDE CHAIN REMARK 500 15 ARG A 18 0.32 SIDE CHAIN REMARK 500 16 ARG A 13 0.27 SIDE CHAIN REMARK 500 16 ARG A 18 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 1BQF A 1 25 UNP Q27913 GBP_PSESE 1 25 SEQRES 1 A 25 GLU ASN PHE SER GLY GLY CYS VAL ALA GLY TYR MET ARG SEQRES 2 A 25 THR PRO ASP GLY ARG CYS LYS PRO THR PHE TYR GLN SHEET 1 A 2 TYR A 11 ARG A 13 0 SHEET 2 A 2 CYS A 19 PRO A 21 -1 N LYS A 20 O MET A 12 SSBOND 1 CYS A 7 CYS A 19 1555 1555 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000