PDB Short entry for 1COO HEADER NUCLEOTIDYL TRANSFERASE 09-OCT-95 1COO TITLE THE COOH-TERMINAL DOMAIN OF RNA POLYMERASE ALPHA SUBUNIT COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA POLYMERASE ALPHA SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: COOH-TERMINAL DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 CELL_LINE: NH315; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-3A KEYWDS TRANSCRIPTION REGULATION, NUCLEOTIDYL TRANSFERASE EXPDTA SOLUTION NMR AUTHOR Y.H.JEON,T.NEGISHI,M.SHIRAKAWA,T.YAMAZAKI,N.FUJITA,A.ISHIHAMA, AUTHOR 2 Y.KYOGOKU REVDAT 4 10-APR-24 1COO 1 SEQADV REVDAT 3 13-JUL-11 1COO 1 VERSN REVDAT 2 24-FEB-09 1COO 1 VERSN REVDAT 1 08-MAR-96 1COO 0 JRNL AUTH Y.H.JEON,T.NEGISHI,M.SHIRAKAWA,T.YAMAZAKI,N.FUJITA, JRNL AUTH 2 A.ISHIHAMA,Y.KYOGOKU JRNL TITL SOLUTION STRUCTURE OF THE ACTIVATOR CONTACT DOMAIN OF THE JRNL TITL 2 RNA POLYMERASE ALPHA SUBUNIT. JRNL REF SCIENCE V. 270 1495 1995 JRNL REFN ISSN 0036-8075 JRNL PMID 7491496 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.NEGISHI,N.FUJITA,A.ISHIHAMA REMARK 1 TITL STRUCTURAL MAP OF THE ALPHA SUBUNIT OF ESCHERICHIA COLI RNA REMARK 1 TITL 2 POLYMERASE; STRUCTURAL DOMAINS IDENTIFIED BY PROTEOLYTIC REMARK 1 TITL 3 CLEAVAGE REMARK 1 REF J.MOL.BIOL. V. 248 723 1995 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1COO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000172436. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 RES C SSSEQI REMARK 465 MET A 232 REMARK 465 ASP A 233 REMARK 465 LEU A 234 REMARK 465 ARG A 235 REMARK 465 ASP A 236 REMARK 465 VAL A 237 REMARK 465 ARG A 238 REMARK 465 GLU A 239 REMARK 465 PRO A 240 REMARK 465 GLU A 241 REMARK 465 VAL A 242 REMARK 465 LYS A 243 REMARK 465 GLU A 244 REMARK 465 GLU A 245 REMARK 465 LYS A 246 REMARK 465 PRO A 247 REMARK 465 GLU A 248 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 262 -151.71 -88.25 REMARK 500 THR A 263 -169.00 -77.90 REMARK 500 SER A 266 -76.32 -86.42 REMARK 500 GLN A 283 37.18 -85.17 REMARK 500 ARG A 284 -143.50 -134.98 REMARK 500 LEU A 290 32.71 -90.02 REMARK 500 LYS A 291 14.92 -141.86 REMARK 500 PRO A 293 28.15 -79.82 REMARK 500 ASN A 294 25.19 -160.71 REMARK 500 LEU A 295 -142.44 -114.69 REMARK 500 MET A 316 86.87 -63.72 REMARK 500 GLU A 319 -138.36 -61.17 REMARK 500 ILE A 326 43.32 -141.14 REMARK 500 REMARK 500 REMARK: NULL DBREF 1COO A 233 329 UNP P0A7Z4 RPOA_ECOLI 233 329 SEQADV 1COO GLU A 239 UNP P0A7Z4 GLN 239 CONFLICT SEQRES 1 A 98 MET ASP LEU ARG ASP VAL ARG GLU PRO GLU VAL LYS GLU SEQRES 2 A 98 GLU LYS PRO GLU PHE ASP PRO ILE LEU LEU ARG PRO VAL SEQRES 3 A 98 ASP ASP LEU GLU LEU THR VAL ARG SER ALA ASN CYS LEU SEQRES 4 A 98 LYS ALA GLU ALA ILE HIS TYR ILE GLY ASP LEU VAL GLN SEQRES 5 A 98 ARG THR GLU VAL GLU LEU LEU LYS THR PRO ASN LEU GLY SEQRES 6 A 98 LYS LYS SER LEU THR GLU ILE LYS ASP VAL LEU ALA SER SEQRES 7 A 98 ARG GLY LEU SER LEU GLY MET ARG LEU GLU ASN TRP PRO SEQRES 8 A 98 PRO ALA SER ILE ALA ASP GLU HELIX 1 H1 VAL A 264 GLU A 273 1 10 HELIX 2 H2 ILE A 278 GLN A 283 1 6 HELIX 3 H3 GLU A 286 THR A 292 1 7 HELIX 4 H4 LYS A 297 SER A 309 1 13 CISPEP 1 TRP A 321 PRO A 322 0 -0.68 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000