PDB Short entry for 1COP HEADER GENE REGULATING PROTEIN 23-JUN-95 1COP TITLE THREE-DIMENSIONAL DIMER STRUCTURE OF THE LAMBDA-CRO REPRESSOR IN TITLE 2 SOLUTION AS DETERMINED BY HETERONUCLEAR MULTIDIMENSIONAL NMR COMPND MOL_ID: 1; COMPND 2 MOLECULE: CRO REPRESSOR; COMPND 3 CHAIN: D, E; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE LAMBDA; SOURCE 3 ORGANISM_TAXID: 10710; SOURCE 4 GENE: CRO; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: TG1; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PKH1500; SOURCE 9 EXPRESSION_SYSTEM_GENE: CRO KEYWDS GENE REGULATING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.MATSUO,M.SHIRAKAWA,Y.KYOGOKU REVDAT 3 16-FEB-22 1COP 1 REMARK REVDAT 2 24-FEB-09 1COP 1 VERSN REVDAT 1 15-OCT-95 1COP 0 JRNL AUTH H.MATSUO,M.SHIRAKAWA,Y.KYOGOKU JRNL TITL THREE-DIMENSIONAL DIMER STRUCTURE OF THE LAMBDA-CRO JRNL TITL 2 REPRESSOR IN SOLUTION AS DETERMINED BY HETERONUCLEAR JRNL TITL 3 MULTIDIMENSIONAL NMR. JRNL REF J.MOL.BIOL. V. 254 668 1995 JRNL REFN ISSN 0022-2836 JRNL PMID 7500341 JRNL DOI 10.1006/JMBI.1995.0646 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1COP COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000172437. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU D 2 124.91 -179.03 REMARK 500 1 ALA D 46 -18.72 -48.35 REMARK 500 1 ASP D 47 30.89 -82.98 REMARK 500 1 ASN D 61 -156.27 -87.86 REMARK 500 1 LYS D 62 -176.74 67.28 REMARK 500 1 LYS E 39 71.74 37.44 REMARK 500 1 ASP E 47 31.77 -83.69 REMARK 500 1 TYR E 51 81.55 -157.42 REMARK 500 1 PRO E 59 -70.68 -80.15 REMARK 500 1 SER E 60 -80.48 -83.24 REMARK 500 2 ARG D 38 178.51 -51.37 REMARK 500 2 ASP D 47 32.19 -86.27 REMARK 500 2 TYR D 51 73.55 -150.09 REMARK 500 2 PRO D 59 -160.01 -79.91 REMARK 500 2 VAL E 25 -169.98 -104.85 REMARK 500 2 ASP E 47 31.01 -84.33 REMARK 500 2 TYR E 51 78.02 -151.21 REMARK 500 2 LYS E 62 150.81 173.09 REMARK 500 3 VAL D 25 -176.28 -66.99 REMARK 500 3 ALA D 46 -26.53 -39.74 REMARK 500 3 ASP D 47 34.48 -85.66 REMARK 500 3 PRO D 59 -157.39 -81.92 REMARK 500 3 SER D 60 -164.17 -60.51 REMARK 500 3 THR D 65 26.81 -151.47 REMARK 500 3 SER E 60 -149.44 -66.72 REMARK 500 3 LYS E 63 -146.89 -91.54 REMARK 500 3 THR E 65 88.77 -154.33 REMARK 500 4 ASP D 47 32.93 -86.00 REMARK 500 4 LYS D 62 68.70 -164.17 REMARK 500 4 GLU E 2 105.50 173.06 REMARK 500 4 ARG E 38 -156.78 -73.19 REMARK 500 4 LYS E 39 72.36 -111.95 REMARK 500 4 ASP E 47 33.95 -84.80 REMARK 500 4 TYR E 51 81.27 -159.63 REMARK 500 4 LYS E 63 58.60 -95.45 REMARK 500 4 THR E 65 62.47 -112.27 REMARK 500 5 GLU D 2 -74.56 -163.90 REMARK 500 5 THR D 6 152.67 -49.40 REMARK 500 5 ARG D 38 -154.17 -77.07 REMARK 500 5 ASP D 47 34.06 -85.76 REMARK 500 5 TYR D 51 79.47 -152.76 REMARK 500 5 PRO D 59 -87.77 -82.12 REMARK 500 5 LYS D 63 173.09 58.51 REMARK 500 5 THR D 65 -164.32 -120.41 REMARK 500 5 GLU E 2 108.38 62.43 REMARK 500 5 ASP E 47 31.61 -84.57 REMARK 500 5 THR E 65 -159.72 -118.04 REMARK 500 6 VAL D 25 -173.01 -52.81 REMARK 500 6 ASP D 47 33.66 -84.82 REMARK 500 6 PRO D 59 -160.31 -76.62 REMARK 500 REMARK 500 THIS ENTRY HAS 183 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG D 4 0.29 SIDE CHAIN REMARK 500 1 ARG D 13 0.25 SIDE CHAIN REMARK 500 1 ARG D 38 0.21 SIDE CHAIN REMARK 500 1 ARG E 4 0.23 SIDE CHAIN REMARK 500 1 ARG E 13 0.26 SIDE CHAIN REMARK 500 1 ARG E 38 0.31 SIDE CHAIN REMARK 500 2 ARG D 4 0.18 SIDE CHAIN REMARK 500 2 ARG D 13 0.26 SIDE CHAIN REMARK 500 2 ARG D 38 0.32 SIDE CHAIN REMARK 500 2 ARG E 4 0.20 SIDE CHAIN REMARK 500 2 ARG E 38 0.09 SIDE CHAIN REMARK 500 3 ARG D 4 0.32 SIDE CHAIN REMARK 500 3 ARG D 13 0.32 SIDE CHAIN REMARK 500 3 ARG D 38 0.20 SIDE CHAIN REMARK 500 3 ARG E 4 0.29 SIDE CHAIN REMARK 500 3 ARG E 13 0.24 SIDE CHAIN REMARK 500 3 ARG E 38 0.32 SIDE CHAIN REMARK 500 4 ARG D 4 0.30 SIDE CHAIN REMARK 500 4 ARG D 13 0.16 SIDE CHAIN REMARK 500 4 ARG D 38 0.31 SIDE CHAIN REMARK 500 4 ARG E 4 0.32 SIDE CHAIN REMARK 500 4 ARG E 13 0.29 SIDE CHAIN REMARK 500 5 ARG D 4 0.32 SIDE CHAIN REMARK 500 5 ARG D 13 0.24 SIDE CHAIN REMARK 500 5 ARG D 38 0.20 SIDE CHAIN REMARK 500 5 ARG E 4 0.18 SIDE CHAIN REMARK 500 5 ARG E 13 0.20 SIDE CHAIN REMARK 500 5 ARG E 38 0.18 SIDE CHAIN REMARK 500 6 ARG D 4 0.25 SIDE CHAIN REMARK 500 6 ARG D 13 0.31 SIDE CHAIN REMARK 500 6 ARG D 38 0.26 SIDE CHAIN REMARK 500 6 ARG E 4 0.19 SIDE CHAIN REMARK 500 6 ARG E 13 0.32 SIDE CHAIN REMARK 500 6 ARG E 38 0.31 SIDE CHAIN REMARK 500 7 ARG D 4 0.28 SIDE CHAIN REMARK 500 7 ARG D 13 0.26 SIDE CHAIN REMARK 500 7 ARG D 38 0.27 SIDE CHAIN REMARK 500 7 ARG E 4 0.26 SIDE CHAIN REMARK 500 7 ARG E 13 0.19 SIDE CHAIN REMARK 500 7 ARG E 38 0.31 SIDE CHAIN REMARK 500 8 ARG D 4 0.19 SIDE CHAIN REMARK 500 8 ARG D 13 0.29 SIDE CHAIN REMARK 500 8 ARG D 38 0.29 SIDE CHAIN REMARK 500 8 ARG E 4 0.15 SIDE CHAIN REMARK 500 8 ARG E 13 0.32 SIDE CHAIN REMARK 500 8 ARG E 38 0.23 SIDE CHAIN REMARK 500 9 ARG D 4 0.21 SIDE CHAIN REMARK 500 9 ARG D 13 0.23 SIDE CHAIN REMARK 500 9 ARG D 38 0.19 SIDE CHAIN REMARK 500 9 ARG E 4 0.29 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 114 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1COP D 1 66 UNP P03040 RCRO_LAMBD 1 66 DBREF 1COP E 1 66 UNP P03040 RCRO_LAMBD 1 66 SEQRES 1 D 66 MET GLU GLN ARG ILE THR LEU LYS ASP TYR ALA MET ARG SEQRES 2 D 66 PHE GLY GLN THR LYS THR ALA LYS ASP LEU GLY VAL TYR SEQRES 3 D 66 GLN SER ALA ILE ASN LYS ALA ILE HIS ALA GLY ARG LYS SEQRES 4 D 66 ILE PHE LEU THR ILE ASN ALA ASP GLY SER VAL TYR ALA SEQRES 5 D 66 GLU GLU VAL LYS PRO PHE PRO SER ASN LYS LYS THR THR SEQRES 6 D 66 ALA SEQRES 1 E 66 MET GLU GLN ARG ILE THR LEU LYS ASP TYR ALA MET ARG SEQRES 2 E 66 PHE GLY GLN THR LYS THR ALA LYS ASP LEU GLY VAL TYR SEQRES 3 E 66 GLN SER ALA ILE ASN LYS ALA ILE HIS ALA GLY ARG LYS SEQRES 4 E 66 ILE PHE LEU THR ILE ASN ALA ASP GLY SER VAL TYR ALA SEQRES 5 E 66 GLU GLU VAL LYS PRO PHE PRO SER ASN LYS LYS THR THR SEQRES 6 E 66 ALA HELIX 1 1 LEU D 7 ARG D 13 1 7 HELIX 2 2 GLN D 16 LEU D 23 1 8 HELIX 3 3 GLN D 27 ALA D 36 1 10 HELIX 4 4 LEU E 7 ARG E 13 1 7 HELIX 5 5 GLN E 16 LEU E 23 1 8 HELIX 6 6 GLN E 27 ALA E 36 1 10 SHEET 1 A 6 GLN D 3 THR D 6 0 SHEET 2 A 6 ILE D 40 ASN D 45 -1 N ILE D 44 O GLN D 3 SHEET 3 A 6 SER D 49 PRO D 57 -1 N GLU D 53 O PHE D 41 SHEET 4 A 6 SER E 49 PRO E 57 -1 N LYS E 56 O GLU D 54 SHEET 5 A 6 ILE E 40 ASN E 45 -1 N ASN E 45 O SER E 49 SHEET 6 A 6 GLN E 3 THR E 6 -1 N ILE E 5 O LEU E 42 CISPEP 1 PHE D 58 PRO D 59 1 -0.65 CISPEP 2 PHE E 58 PRO E 59 1 -0.60 CISPEP 3 PHE D 58 PRO D 59 2 -0.41 CISPEP 4 PHE E 58 PRO E 59 2 -0.37 CISPEP 5 PHE D 58 PRO D 59 3 -0.81 CISPEP 6 PHE E 58 PRO E 59 3 -0.37 CISPEP 7 PHE D 58 PRO D 59 4 -1.01 CISPEP 8 PHE E 58 PRO E 59 4 0.36 CISPEP 9 PHE D 58 PRO D 59 5 -0.80 CISPEP 10 PHE E 58 PRO E 59 5 -0.01 CISPEP 11 PHE D 58 PRO D 59 6 0.36 CISPEP 12 PHE E 58 PRO E 59 6 0.13 CISPEP 13 PHE D 58 PRO D 59 7 -0.85 CISPEP 14 PHE E 58 PRO E 59 7 0.22 CISPEP 15 PHE D 58 PRO D 59 8 0.09 CISPEP 16 PHE E 58 PRO E 59 8 -0.25 CISPEP 17 PHE D 58 PRO D 59 9 -0.71 CISPEP 18 PHE E 58 PRO E 59 9 -0.65 CISPEP 19 PHE D 58 PRO D 59 10 -0.04 CISPEP 20 PHE E 58 PRO E 59 10 -0.07 CISPEP 21 PHE D 58 PRO D 59 11 0.43 CISPEP 22 PHE E 58 PRO E 59 11 0.24 CISPEP 23 PHE D 58 PRO D 59 12 -0.46 CISPEP 24 PHE E 58 PRO E 59 12 -0.50 CISPEP 25 PHE D 58 PRO D 59 13 -0.69 CISPEP 26 PHE E 58 PRO E 59 13 -0.09 CISPEP 27 PHE D 58 PRO D 59 14 0.29 CISPEP 28 PHE E 58 PRO E 59 14 0.22 CISPEP 29 PHE D 58 PRO D 59 15 -0.14 CISPEP 30 PHE E 58 PRO E 59 15 -0.99 CISPEP 31 PHE D 58 PRO D 59 16 -0.17 CISPEP 32 PHE E 58 PRO E 59 16 -0.18 CISPEP 33 PHE D 58 PRO D 59 17 -0.57 CISPEP 34 PHE E 58 PRO E 59 17 -0.72 CISPEP 35 PHE D 58 PRO D 59 18 -0.60 CISPEP 36 PHE E 58 PRO E 59 18 -0.19 CISPEP 37 PHE D 58 PRO D 59 19 -0.90 CISPEP 38 PHE E 58 PRO E 59 19 0.07 CISPEP 39 PHE D 58 PRO D 59 20 0.01 CISPEP 40 PHE E 58 PRO E 59 20 -0.83 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000