PDB Short entry for 1CRP HEADER ONCOGENE PROTEIN 24-NOV-93 1CRP TITLE THE SOLUTION STRUCTURE AND DYNAMICS OF RAS P21. GDP DETERMINED BY TITLE 2 HETERONUCLEAR THREE AND FOUR DIMENSIONAL NMR SPECTROSCOPY SPLIT 1CRP 1CRR COMPND MOL_ID: 1; COMPND 2 MOLECULE: C-H-RAS P21 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS ONCOGENE PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR P.J.KRAULIS,P.J.DOMAILLE,S.L.CAMPBELL-BURK,T.VAN AKEN,E.D.LAUE REVDAT 3 16-FEB-22 1CRP 1 REMARK LINK REVDAT 2 24-FEB-09 1CRP 1 VERSN REVDAT 1 31-JUL-94 1CRP 0 JRNL AUTH P.J.KRAULIS,P.J.DOMAILLE,S.L.CAMPBELL-BURK,T.VAN AKEN, JRNL AUTH 2 E.D.LAUE JRNL TITL SOLUTION STRUCTURE AND DYNAMICS OF RAS P21.GDP DETERMINED BY JRNL TITL 2 HETERONUCLEAR THREE- AND FOUR-DIMENSIONAL NMR SPECTROSCOPY. JRNL REF BIOCHEMISTRY V. 33 3515 1994 JRNL REFN ISSN 0006-2960 JRNL PMID 8142349 JRNL DOI 10.1021/BI00178A008 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.L.CAMPBELL-BURK,P.J.DOMAILLE,M.A.STAROVASNIK,W.BOUCHER, REMARK 1 AUTH 2 E.D.LAUE REMARK 1 TITL SEQUENTIAL ASSIGNMENT OF THE BACKBONE NUCLEI (1H, 15N, AND REMARK 1 TITL 2 13C) OF C-H-RAS P21 (1-166).GDP USING A NOVEL 4D NMR REMARK 1 TITL 3 STRATEGY REMARK 1 REF J.BIOMOL.NMR V. 2 639 1992 REMARK 1 REFN ISSN 0925-2738 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1CRP COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000172487. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 7 95.93 -62.60 REMARK 500 1 THR A 20 -70.41 -61.47 REMARK 500 1 ILE A 24 -82.72 -92.97 REMARK 500 1 ASN A 26 60.52 70.71 REMARK 500 1 PHE A 28 90.30 51.99 REMARK 500 1 GLU A 31 48.32 -177.87 REMARK 500 1 ASP A 38 170.12 177.75 REMARK 500 1 ASP A 47 39.63 -152.35 REMARK 500 1 CYS A 51 117.09 -164.97 REMARK 500 1 THR A 58 95.97 51.78 REMARK 500 1 ALA A 59 -80.47 -98.34 REMARK 500 1 GLU A 62 -178.47 59.03 REMARK 500 1 GLU A 63 -171.16 -61.17 REMARK 500 1 TYR A 64 -86.55 66.76 REMARK 500 1 SER A 65 -89.50 59.38 REMARK 500 1 THR A 87 -49.47 84.37 REMARK 500 1 ASP A 108 59.77 -154.71 REMARK 500 1 LYS A 117 37.13 74.10 REMARK 500 1 ALA A 122 92.58 -61.01 REMARK 500 1 ARG A 128 -58.07 -120.48 REMARK 500 1 THR A 148 21.81 -171.77 REMARK 500 1 GLN A 165 -75.55 -87.29 REMARK 500 2 GLN A 25 -105.09 -138.89 REMARK 500 2 ASN A 26 41.32 165.85 REMARK 500 2 GLU A 31 68.99 76.19 REMARK 500 2 TYR A 32 94.95 -61.71 REMARK 500 2 ASP A 33 113.34 58.48 REMARK 500 2 THR A 35 35.57 70.48 REMARK 500 2 GLU A 37 61.77 -115.54 REMARK 500 2 ILE A 46 -68.56 -141.04 REMARK 500 2 ASP A 47 51.06 -92.36 REMARK 500 2 ASP A 54 95.72 -69.12 REMARK 500 2 ALA A 59 -72.37 -112.98 REMARK 500 2 GLU A 62 -175.31 -65.91 REMARK 500 2 GLU A 63 -177.07 60.77 REMARK 500 2 SER A 65 -165.24 56.10 REMARK 500 2 ALA A 66 -43.61 -166.05 REMARK 500 2 GLU A 76 -37.46 -135.41 REMARK 500 2 ASN A 86 -46.41 -162.96 REMARK 500 2 THR A 87 -46.40 83.70 REMARK 500 2 ASP A 108 55.93 -166.02 REMARK 500 2 PRO A 110 86.22 -67.43 REMARK 500 2 LYS A 117 42.04 72.30 REMARK 500 2 ASP A 119 34.05 -97.35 REMARK 500 2 SER A 127 44.74 -92.31 REMARK 500 2 ARG A 128 -47.45 -133.92 REMARK 500 2 SER A 145 102.86 -166.26 REMARK 500 2 THR A 148 28.31 -173.84 REMARK 500 3 VAL A 9 -158.27 -154.50 REMARK 500 3 ILE A 24 -84.53 -96.96 REMARK 500 REMARK 500 THIS ENTRY HAS 481 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 GDP A 200 O1B 59.7 REMARK 620 3 HOH A 202 O 128.4 71.0 REMARK 620 4 HOH A 203 O 105.1 59.0 56.0 REMARK 620 5 HOH A 204 O 74.7 118.2 148.6 100.9 REMARK 620 6 HOH A 205 O 110.3 98.1 61.0 116.9 137.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 200 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1CRQ RELATED DB: PDB REMARK 900 RELATED ID: 1CRR RELATED DB: PDB DBREF 1CRP A 1 166 UNP P01112 RASH_HUMAN 1 166 SEQRES 1 A 166 MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY GLY SEQRES 2 A 166 VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN ASN SEQRES 3 A 166 HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SER SEQRES 4 A 166 TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS LEU SEQRES 5 A 166 LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SER SEQRES 6 A 166 ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY PHE SEQRES 7 A 166 LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE GLU SEQRES 8 A 166 ASP ILE HIS GLN TYR ARG GLU GLN ILE LYS ARG VAL LYS SEQRES 9 A 166 ASP SER ASP ASP VAL PRO MET VAL LEU VAL GLY ASN LYS SEQRES 10 A 166 CYS ASP LEU ALA ALA ARG THR VAL GLU SER ARG GLN ALA SEQRES 11 A 166 GLN ASP LEU ALA ARG SER TYR GLY ILE PRO TYR ILE GLU SEQRES 12 A 166 THR SER ALA LYS THR ARG GLN GLY VAL GLU ASP ALA PHE SEQRES 13 A 166 TYR THR LEU VAL ARG GLU ILE ARG GLN HIS HET MG A 201 1 HET GDP A 200 40 HETNAM MG MAGNESIUM ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE FORMUL 2 MG MG 2+ FORMUL 3 GDP C10 H15 N5 O11 P2 FORMUL 4 HOH *4(H2 O) HELIX 1 A1 GLY A 15 GLN A 25 1 11 HELIX 2 A2 ALA A 66 GLY A 75 1 10 HELIX 3 A3 THR A 87 LYS A 104 1 18 HELIX 4 A4 SER A 127 GLY A 138 1 12 HELIX 5 A5 VAL A 152 HIS A 166 1 15 SHEET 1 S1 5 ASP A 38 ILE A 46 0 SHEET 2 S1 5 GLU A 49 ASP A 57 -1 O LEU A 53 N LYS A 42 SHEET 3 S1 5 THR A 2 VAL A 9 1 O LEU A 6 N LEU A 56 SHEET 4 S1 5 GLY A 77 ILE A 84 1 O LEU A 79 N VAL A 9 SHEET 5 S1 5 PRO A 110 LYS A 117 1 O VAL A 112 N CYS A 80 LINK OG SER A 17 MG MG A 201 1555 1555 2.48 LINK O1B GDP A 200 MG MG A 201 1555 1555 2.47 LINK MG MG A 201 O HOH A 202 1555 1555 2.62 LINK MG MG A 201 O HOH A 203 1555 1555 2.69 LINK MG MG A 201 O HOH A 204 1555 1555 2.55 LINK MG MG A 201 O HOH A 205 1555 1555 2.52 SITE 1 AC1 6 SER A 17 GDP A 200 HOH A 202 HOH A 203 SITE 2 AC1 6 HOH A 204 HOH A 205 SITE 1 AC2 17 ALA A 11 GLY A 12 GLY A 13 VAL A 14 SITE 2 AC2 17 GLY A 15 LYS A 16 SER A 17 ALA A 18 SITE 3 AC2 17 ASP A 30 ASN A 116 ASP A 119 SER A 145 SITE 4 AC2 17 ALA A 146 LYS A 147 MG A 201 HOH A 202 SITE 5 AC2 17 HOH A 203 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000