PDB Short entry for 1CVU HEADER OXIDOREDUCTASE/PEPTIDE 24-AUG-99 1CVU TITLE CRYSTAL STRUCTURE OF ARACHIDONIC ACID BOUND TO THE CYCLOOXYGENASE TITLE 2 ACTIVE SITE OF COX-2 CAVEAT 1CVU MAN D 4 HAS WRONG CHIRALITY AT ATOM C1 MAN G 4 HAS WRONG CAVEAT 2 1CVU CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROSTAGLANDIN H2 SYNTHASE-2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: PROSTAGLANDIN H2 SYNTHASE-2; COMPND 5 EC: 1.14.99.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PROTEIN (9-MER); COMPND 10 CHAIN: F; COMPND 11 ENGINEERED: YES; COMPND 12 OTHER_DETAILS: SYNTHETIC SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PVL1393; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES KEYWDS COX-2, CYCLOOXYGENASE, PROSTAGLANDIN, ARACHIDONATE, ENDOPEROXIDE, KEYWDS 2 OXIDOREDUCTASE-PEPTIDE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.R.KIEFER,J.L.PAWLITZ,K.T.MORELAND,R.A.STEGEMAN,J.K.GIERSE, AUTHOR 2 A.M.STEVENS,D.C.GOODWIN,S.W.ROWLINSON,L.J.MARNETT,W.C.STALLINGS, AUTHOR 3 R.G.KURUMBAIL REVDAT 6 03-NOV-21 1CVU 1 SEQADV HETSYN REVDAT 5 29-JUL-20 1CVU 1 CAVEAT COMPND REMARK HETNAM REVDAT 5 2 1 LINK SITE ATOM REVDAT 4 13-JUL-11 1CVU 1 VERSN REVDAT 3 24-FEB-09 1CVU 1 VERSN REVDAT 2 01-APR-03 1CVU 1 JRNL REVDAT 1 16-MAY-00 1CVU 0 JRNL AUTH J.R.KIEFER,J.L.PAWLITZ,K.T.MORELAND,R.A.STEGEMAN,W.F.HOOD, JRNL AUTH 2 J.K.GIERSE,A.M.STEVENS,D.C.GOODWIN,S.W.ROWLINSON, JRNL AUTH 3 L.J.MARNETT,W.C.STALLINGS,R.G.KURUMBAIL JRNL TITL STRUCTURAL INSIGHTS INTO THE STEREOCHEMISTRY OF THE JRNL TITL 2 CYCLOOXYGENASE REACTION. JRNL REF NATURE V. 405 97 2000 JRNL REFN ISSN 0028-0836 JRNL PMID 10811226 JRNL DOI 10.1038/35011103 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.G.KURUMBAIL,A.M.STEVENS,J.J.MCDONALD,R.A.STEGEMAN,J.Y.PAK, REMARK 1 AUTH 2 D.GILDEHAUS,J.M.MIYASHIRO,T.D.PENNING,K.SEIBERT,P.C.ISAKSON, REMARK 1 AUTH 3 W.C.STALLINGS REMARK 1 TITL STRUCTURAL BASIS FOR SELECTIVE INHIBITION OF BY REMARK 1 TITL 2 ANTI-INFLAMMATORY AGENTS REMARK 1 REF NATURE V. 384 644 1996 REMARK 1 REFN ISSN 0028-0836 REMARK 1 DOI 10.1038/384644A0 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 58608 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3887 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9001 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 328 REMARK 3 SOLVENT ATOMS : 771 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.535 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 CONJUGATE GRADIENT, MOLECULAR DYNAMICS, INDIVIDUAL ATOM ISOTROPIC REMARK 3 B, BULK REMARK 3 SOLVENT CORRECTION REMARK 4 REMARK 4 1CVU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-AUG-99. REMARK 100 THE DEPOSITION ID IS D_1000009571. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-OCT-98 REMARK 200 TEMPERATURE (KELVIN) : 130 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 212739 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.24100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MONOMETHYL PEG 550, MAGNESIUM SULFATE, REMARK 280 ARACHIDNOIC ACID, EPPS, B-OG, PH 8.0, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 90.51800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 66.98000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 62.41700 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 90.51800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 66.98000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 62.41700 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 90.51800 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 66.98000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 62.41700 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 90.51800 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 66.98000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 62.41700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, F, C, D, E, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER F2603 C SER F2603 O 0.183 REMARK 500 SER F2603 C SER F2603 OXT -0.135 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B2216 NE - CZ - NH1 ANGL. DEV. = -4.8 DEGREES REMARK 500 SER F2603 N - CA - C ANGL. DEV. = 18.7 DEGREES REMARK 500 SER F2603 CA - C - O ANGL. DEV. = 24.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 61 12.05 56.05 REMARK 500 SER A 121 -76.63 -16.57 REMARK 500 TYR A 122 3.95 -49.65 REMARK 500 THR A 129 -94.16 -117.42 REMARK 500 ARG A 185 -71.56 -100.21 REMARK 500 ASN A 195 -168.13 -117.99 REMARK 500 GLU A 290 1.91 -64.77 REMARK 500 PRO A 389 -8.92 -57.68 REMARK 500 GLU A 398 -94.79 61.09 REMARK 500 ALA A 435 -170.16 -66.28 REMARK 500 ARG A 438 66.33 37.19 REMARK 500 ASN A 439 15.74 -143.89 REMARK 500 SER A 496 -50.57 76.82 REMARK 500 PRO A 514 102.91 -43.10 REMARK 500 TRP A 545 70.93 -69.51 REMARK 500 ARG B2061 12.04 55.87 REMARK 500 SER B2121 -76.49 -16.02 REMARK 500 TYR B2122 4.02 -49.60 REMARK 500 THR B2129 -92.92 -116.95 REMARK 500 ARG B2185 -71.46 -98.90 REMARK 500 ASN B2195 -167.50 -118.09 REMARK 500 ASP B2249 16.56 56.97 REMARK 500 MET B2273 128.91 -178.27 REMARK 500 TRP B2387 48.00 -87.37 REMARK 500 PRO B2389 -9.29 -57.62 REMARK 500 GLU B2398 -122.25 61.62 REMARK 500 TYR B2409 -5.40 94.53 REMARK 500 VAL B2434 -61.06 -93.85 REMARK 500 ALA B2435 -169.11 -65.56 REMARK 500 ARG B2438 67.37 36.25 REMARK 500 ASN B2439 15.87 -144.61 REMARK 500 SER B2496 -50.80 76.18 REMARK 500 PRO B2514 103.19 -42.73 REMARK 500 TRP B2545 70.51 -68.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 409 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6COX RELATED DB: PDB REMARK 900 CYCLOOXYGENASE-2 COMPLEXED WITH SELECTIVE INHIBITOR SC-558 REMARK 900 RELATED ID: 5COX RELATED DB: PDB REMARK 900 CYCLOOXYGENASE-2 WITHOUT BOUND INHIBITORS REMARK 900 RELATED ID: 1CQE RELATED DB: PDB REMARK 900 CYCLOOXYGENASE-1 STRUCTURE REMARK 900 RELATED ID: 1LOX RELATED DB: PDB REMARK 900 15-LIPOXYGENASE STRUCTURE DBREF 1CVU A 33 583 UNP Q05769 PGH2_MOUSE 18 569 DBREF 1CVU B 2033 2583 UNP Q05769 PGH2_MOUSE 18 569 DBREF 1CVU F 2595 2603 PDB 1CVU 1CVU 2595 2603 SEQADV 1CVU GLN A 310 UNP Q05769 ASN 296 ENGINEERED MUTATION SEQADV 1CVU LYS A 333 UNP Q05769 ARG 319 ENGINEERED MUTATION SEQADV 1CVU GLN B 2310 UNP Q05769 ASN 296 ENGINEERED MUTATION SEQADV 1CVU LYS B 2333 UNP Q05769 ARG 319 ENGINEERED MUTATION SEQRES 1 A 552 ALA ASN PRO CYS CYS SER ASN PRO CYS GLN ASN ARG GLY SEQRES 2 A 552 GLU CYS MET SER THR GLY PHE ASP GLN TYR LYS CYS ASP SEQRES 3 A 552 CYS THR ARG THR GLY PHE TYR GLY GLU ASN CYS THR THR SEQRES 4 A 552 PRO GLU PHE LEU THR ARG ILE LYS LEU LEU LEU LYS PRO SEQRES 5 A 552 THR PRO ASN THR VAL HIS TYR ILE LEU THR HIS PHE LYS SEQRES 6 A 552 GLY VAL TRP ASN ILE VAL ASN ASN ILE PRO PHE LEU ARG SEQRES 7 A 552 SER LEU ILE MET LYS TYR VAL LEU THR SER ARG SER TYR SEQRES 8 A 552 LEU ILE ASP SER PRO PRO THR TYR ASN VAL HIS TYR GLY SEQRES 9 A 552 TYR LYS SER TRP GLU ALA PHE SER ASN LEU SER TYR TYR SEQRES 10 A 552 THR ARG ALA LEU PRO PRO VAL ALA ASP ASP CYS PRO THR SEQRES 11 A 552 PRO MET GLY VAL LYS GLY ASN LYS GLU LEU PRO ASP SER SEQRES 12 A 552 LYS GLU VAL LEU GLU LYS VAL LEU LEU ARG ARG GLU PHE SEQRES 13 A 552 ILE PRO ASP PRO GLN GLY SER ASN MET MET PHE ALA PHE SEQRES 14 A 552 PHE ALA GLN HIS PHE THR ALA GLN PHE PHE LYS THR ASP SEQRES 15 A 552 HIS LYS ARG GLY PRO GLY PHE THR ARG GLY LEU GLY HIS SEQRES 16 A 552 GLY VAL ASP LEU ASN HIS ILE TYR GLY GLU THR LEU ASP SEQRES 17 A 552 ARG GLN HIS LYS LEU ARG LEU PHE LYS ASP GLY LYS LEU SEQRES 18 A 552 LYS TYR GLN VAL ILE GLY GLY GLU VAL TYR PRO PRO THR SEQRES 19 A 552 VAL LYS ASP THR GLN VAL GLU MET ILE TYR PRO PRO HIS SEQRES 20 A 552 ILE PRO GLU ASN LEU GLN PHE ALA VAL GLY GLN GLU VAL SEQRES 21 A 552 PHE GLY LEU VAL PRO GLY LEU MET MET TYR ALA THR ILE SEQRES 22 A 552 TRP LEU ARG GLU HIS GLN ARG VAL CYS ASP ILE LEU LYS SEQRES 23 A 552 GLN GLU HIS PRO GLU TRP GLY ASP GLU GLN LEU PHE GLN SEQRES 24 A 552 THR SER LYS LEU ILE LEU ILE GLY GLU THR ILE LYS ILE SEQRES 25 A 552 VAL ILE GLU ASP TYR VAL GLN HIS LEU SER GLY TYR HIS SEQRES 26 A 552 PHE LYS LEU LYS PHE ASP PRO GLU LEU LEU PHE ASN GLN SEQRES 27 A 552 GLN PHE GLN TYR GLN ASN ARG ILE ALA SER GLU PHE ASN SEQRES 28 A 552 THR LEU TYR HIS TRP HIS PRO LEU LEU PRO ASP THR PHE SEQRES 29 A 552 ASN ILE GLU ASP GLN GLU TYR SER PHE LYS GLN PHE LEU SEQRES 30 A 552 TYR ASN ASN SER ILE LEU LEU GLU HIS GLY LEU THR GLN SEQRES 31 A 552 PHE VAL GLU SER PHE THR ARG GLN ILE ALA GLY ARG VAL SEQRES 32 A 552 ALA GLY GLY ARG ASN VAL PRO ILE ALA VAL GLN ALA VAL SEQRES 33 A 552 ALA LYS ALA SER ILE ASP GLN SER ARG GLU MET LYS TYR SEQRES 34 A 552 GLN SER LEU ASN GLU TYR ARG LYS ARG PHE SER LEU LYS SEQRES 35 A 552 PRO TYR THR SER PHE GLU GLU LEU THR GLY GLU LYS GLU SEQRES 36 A 552 MET ALA ALA GLU LEU LYS ALA LEU TYR SER ASP ILE ASP SEQRES 37 A 552 VAL MET GLU LEU TYR PRO ALA LEU LEU VAL GLU LYS PRO SEQRES 38 A 552 ARG PRO ASP ALA ILE PHE GLY GLU THR MET VAL GLU LEU SEQRES 39 A 552 GLY ALA PRO PHE SER LEU LYS GLY LEU MET GLY ASN PRO SEQRES 40 A 552 ILE CYS SER PRO GLN TYR TRP LYS PRO SER THR PHE GLY SEQRES 41 A 552 GLY GLU VAL GLY PHE LYS ILE ILE ASN THR ALA SER ILE SEQRES 42 A 552 GLN SER LEU ILE CYS ASN ASN VAL LYS GLY CYS PRO PHE SEQRES 43 A 552 THR SER PHE ASN VAL GLN SEQRES 1 B 552 ALA ASN PRO CYS CYS SER ASN PRO CYS GLN ASN ARG GLY SEQRES 2 B 552 GLU CYS MET SER THR GLY PHE ASP GLN TYR LYS CYS ASP SEQRES 3 B 552 CYS THR ARG THR GLY PHE TYR GLY GLU ASN CYS THR THR SEQRES 4 B 552 PRO GLU PHE LEU THR ARG ILE LYS LEU LEU LEU LYS PRO SEQRES 5 B 552 THR PRO ASN THR VAL HIS TYR ILE LEU THR HIS PHE LYS SEQRES 6 B 552 GLY VAL TRP ASN ILE VAL ASN ASN ILE PRO PHE LEU ARG SEQRES 7 B 552 SER LEU ILE MET LYS TYR VAL LEU THR SER ARG SER TYR SEQRES 8 B 552 LEU ILE ASP SER PRO PRO THR TYR ASN VAL HIS TYR GLY SEQRES 9 B 552 TYR LYS SER TRP GLU ALA PHE SER ASN LEU SER TYR TYR SEQRES 10 B 552 THR ARG ALA LEU PRO PRO VAL ALA ASP ASP CYS PRO THR SEQRES 11 B 552 PRO MET GLY VAL LYS GLY ASN LYS GLU LEU PRO ASP SER SEQRES 12 B 552 LYS GLU VAL LEU GLU LYS VAL LEU LEU ARG ARG GLU PHE SEQRES 13 B 552 ILE PRO ASP PRO GLN GLY SER ASN MET MET PHE ALA PHE SEQRES 14 B 552 PHE ALA GLN HIS PHE THR ALA GLN PHE PHE LYS THR ASP SEQRES 15 B 552 HIS LYS ARG GLY PRO GLY PHE THR ARG GLY LEU GLY HIS SEQRES 16 B 552 GLY VAL ASP LEU ASN HIS ILE TYR GLY GLU THR LEU ASP SEQRES 17 B 552 ARG GLN HIS LYS LEU ARG LEU PHE LYS ASP GLY LYS LEU SEQRES 18 B 552 LYS TYR GLN VAL ILE GLY GLY GLU VAL TYR PRO PRO THR SEQRES 19 B 552 VAL LYS ASP THR GLN VAL GLU MET ILE TYR PRO PRO HIS SEQRES 20 B 552 ILE PRO GLU ASN LEU GLN PHE ALA VAL GLY GLN GLU VAL SEQRES 21 B 552 PHE GLY LEU VAL PRO GLY LEU MET MET TYR ALA THR ILE SEQRES 22 B 552 TRP LEU ARG GLU HIS GLN ARG VAL CYS ASP ILE LEU LYS SEQRES 23 B 552 GLN GLU HIS PRO GLU TRP GLY ASP GLU GLN LEU PHE GLN SEQRES 24 B 552 THR SER LYS LEU ILE LEU ILE GLY GLU THR ILE LYS ILE SEQRES 25 B 552 VAL ILE GLU ASP TYR VAL GLN HIS LEU SER GLY TYR HIS SEQRES 26 B 552 PHE LYS LEU LYS PHE ASP PRO GLU LEU LEU PHE ASN GLN SEQRES 27 B 552 GLN PHE GLN TYR GLN ASN ARG ILE ALA SER GLU PHE ASN SEQRES 28 B 552 THR LEU TYR HIS TRP HIS PRO LEU LEU PRO ASP THR PHE SEQRES 29 B 552 ASN ILE GLU ASP GLN GLU TYR SER PHE LYS GLN PHE LEU SEQRES 30 B 552 TYR ASN ASN SER ILE LEU LEU GLU HIS GLY LEU THR GLN SEQRES 31 B 552 PHE VAL GLU SER PHE THR ARG GLN ILE ALA GLY ARG VAL SEQRES 32 B 552 ALA GLY GLY ARG ASN VAL PRO ILE ALA VAL GLN ALA VAL SEQRES 33 B 552 ALA LYS ALA SER ILE ASP GLN SER ARG GLU MET LYS TYR SEQRES 34 B 552 GLN SER LEU ASN GLU TYR ARG LYS ARG PHE SER LEU LYS SEQRES 35 B 552 PRO TYR THR SER PHE GLU GLU LEU THR GLY GLU LYS GLU SEQRES 36 B 552 MET ALA ALA GLU LEU LYS ALA LEU TYR SER ASP ILE ASP SEQRES 37 B 552 VAL MET GLU LEU TYR PRO ALA LEU LEU VAL GLU LYS PRO SEQRES 38 B 552 ARG PRO ASP ALA ILE PHE GLY GLU THR MET VAL GLU LEU SEQRES 39 B 552 GLY ALA PRO PHE SER LEU LYS GLY LEU MET GLY ASN PRO SEQRES 40 B 552 ILE CYS SER PRO GLN TYR TRP LYS PRO SER THR PHE GLY SEQRES 41 B 552 GLY GLU VAL GLY PHE LYS ILE ILE ASN THR ALA SER ILE SEQRES 42 B 552 GLN SER LEU ILE CYS ASN ASN VAL LYS GLY CYS PRO PHE SEQRES 43 B 552 THR SER PHE ASN VAL GLN SEQRES 1 F 9 THR LYS THR ALA THR ILE ASN ALA SER MODRES 1CVU ASN A 68 ASN GLYCOSYLATION SITE MODRES 1CVU ASN A 144 ASN GLYCOSYLATION SITE MODRES 1CVU ASN A 410 ASN GLYCOSYLATION SITE MODRES 1CVU ASN B 2068 ASN GLYCOSYLATION SITE MODRES 1CVU ASN B 2144 ASN GLYCOSYLATION SITE MODRES 1CVU ASN B 2410 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET MAN D 3 11 HET MAN D 4 11 HET NAG E 1 14 HET NAG E 2 14 HET NAG G 1 14 HET NAG G 2 14 HET MAN G 3 11 HET MAN G 4 11 HET NAG A 681 14 HET BOG A 702 20 HET BOG A 703 20 HET BOG A 704 20 HET ACD A 701 22 HET NAG B2681 14 HET BOG B2702 20 HET BOG B2704 20 HET ACD B2701 22 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM BOG OCTYL BETA-D-GLUCOPYRANOSIDE HETNAM ACD ARACHIDONIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN BOG BETA-OCTYLGLUCOSIDE; OCTYL BETA-D-GLUCOSIDE; OCTYL D- HETSYN 2 BOG GLUCOSIDE; OCTYL GLUCOSIDE FORMUL 4 NAG 10(C8 H15 N O6) FORMUL 5 MAN 4(C6 H12 O6) FORMUL 9 BOG 5(C14 H28 O6) FORMUL 12 ACD 2(C20 H32 O2) FORMUL 17 HOH *771(H2 O) HELIX 1 1 GLU A 73 LYS A 83 1 11 HELIX 2 2 THR A 85 THR A 94 1 10 HELIX 3 3 PHE A 96 ASN A 105 1 10 HELIX 4 4 ILE A 105A TYR A 122 1 18 HELIX 5 5 SER A 138 ASN A 144 1 7 HELIX 6 6 ASP A 173 LEU A 182 1 10 HELIX 7 7 ASN A 195 ALA A 207 1 13 HELIX 8 8 LEU A 230 GLY A 235 1 6 HELIX 9 9 THR A 237 ARG A 245 1 9 HELIX 10 10 THR A 265 GLN A 270 1 6 HELIX 11 11 PRO A 280 GLN A 284 5 5 HELIX 12 12 VAL A 291 LEU A 294 5 4 HELIX 13 13 VAL A 295 HIS A 320 1 26 HELIX 14 14 GLY A 324 ASP A 347 1 24 HELIX 15 15 ASP A 347 GLY A 354 1 8 HELIX 16 16 ASP A 362 PHE A 367 5 6 HELIX 17 17 ALA A 378 TYR A 385 1 8 HELIX 18 18 TRP A 387 LEU A 391 5 5 HELIX 19 19 SER A 403 LEU A 408 1 6 HELIX 20 20 ASN A 410 GLY A 418 1 9 HELIX 21 21 HIS A 417 GLN A 429 1 13 HELIX 22 22 PRO A 441 ALA A 443 5 3 HELIX 23 23 VAL A 444 MET A 458 1 15 HELIX 24 24 SER A 462 PHE A 470 1 9 HELIX 25 25 SER A 477 GLY A 483 1 7 HELIX 26 26 LYS A 485 SER A 496 1 12 HELIX 27 27 ASP A 497 MET A 501 5 5 HELIX 28 28 GLU A 502 GLU A 510 1 9 HELIX 29 29 GLY A 519 GLY A 536 1 18 HELIX 30 30 ASN A 537 SER A 541 5 5 HELIX 31 31 LYS A 546 GLY A 551 5 6 HELIX 32 32 GLY A 552 THR A 561 1 10 HELIX 33 33 SER A 563 VAL A 572 1 10 HELIX 34 34 GLU B 2073 LYS B 2083 1 11 HELIX 35 35 THR B 2085 THR B 2094 1 10 HELIX 36 36 PHE B 2096 ASN B 2105 1 10 HELIX 37 37 ILE B 105B TYR B 2122 1 18 HELIX 38 38 SER B 2138 ASN B 2144 1 7 HELIX 39 39 ASP B 2173 LEU B 2182 1 10 HELIX 40 40 ASN B 2195 ALA B 2207 1 13 HELIX 41 41 LEU B 2230 GLY B 2235 1 6 HELIX 42 42 THR B 2237 ARG B 2245 1 9 HELIX 43 43 THR B 2265 GLN B 2270 1 6 HELIX 44 44 PRO B 2280 GLN B 2284 5 5 HELIX 45 45 VAL B 2295 HIS B 2320 1 26 HELIX 46 46 GLY B 2324 ASP B 2347 1 24 HELIX 47 47 ASP B 2347 GLY B 2354 1 8 HELIX 48 48 ASP B 2362 PHE B 2367 5 6 HELIX 49 49 ALA B 2378 TYR B 2385 1 8 HELIX 50 50 TRP B 2387 LEU B 2391 5 5 HELIX 51 51 PHE B 2404 LEU B 2408 5 5 HELIX 52 52 ASN B 2411 GLY B 2418 1 8 HELIX 53 53 HIS B 2417 GLN B 2429 1 13 HELIX 54 54 PRO B 2441 ALA B 2443 5 3 HELIX 55 55 VAL B 2444 MET B 2458 1 15 HELIX 56 56 SER B 2462 PHE B 2470 1 9 HELIX 57 57 SER B 2477 GLY B 2483 1 7 HELIX 58 58 LYS B 2485 SER B 2496 1 12 HELIX 59 59 ASP B 2497 MET B 2501 5 5 HELIX 60 60 GLU B 2502 GLU B 2510 1 9 HELIX 61 61 GLY B 2519 GLY B 2536 1 18 HELIX 62 62 ASN B 2537 SER B 2541 5 5 HELIX 63 63 LYS B 2546 GLY B 2551 5 6 HELIX 64 64 GLY B 2552 THR B 2561 1 10 HELIX 65 65 SER B 2563 VAL B 2572 1 10 HELIX 66 66 THR F 2595 SER F 2603 1 9 SHEET 1 A 2 GLU A 46 GLY A 51 0 SHEET 2 A 2 GLN A 54 ASP A 58 -1 O GLN A 54 N THR A 50 SHEET 1 B 2 PHE A 64 TYR A 65 0 SHEET 2 B 2 THR A 71 PRO A 72 -1 N THR A 71 O TYR A 65 SHEET 1 C 2 GLN A 255 ILE A 257 0 SHEET 2 C 2 GLU A 260 TYR A 262 -1 O GLU A 260 N ILE A 257 SHEET 1 D 2 PHE A 395 ILE A 397 0 SHEET 2 D 2 GLN A 400 TYR A 402 -1 N GLN A 400 O ILE A 397 SHEET 1 E 2 GLU B2046 GLY B2051 0 SHEET 2 E 2 GLN B2054 ASP B2058 -1 O GLN B2054 N THR B2050 SHEET 1 F 2 PHE B2064 TYR B2065 0 SHEET 2 F 2 THR B2071 PRO B2072 -1 N THR B2071 O TYR B2065 SHEET 1 G 2 GLN B2255 ILE B2257 0 SHEET 2 G 2 GLU B2260 TYR B2262 -1 O GLU B2260 N ILE B2257 SHEET 1 H 2 PHE B2395 ILE B2397 0 SHEET 2 H 2 GLN B2400 TYR B2402 -1 N GLN B2400 O ILE B2397 SSBOND 1 CYS A 36 CYS A 47 1555 1555 2.04 SSBOND 2 CYS A 37 CYS A 159 1555 1555 2.03 SSBOND 3 CYS A 41 CYS A 57 1555 1555 2.02 SSBOND 4 CYS A 59 CYS A 69 1555 1555 2.03 SSBOND 5 CYS A 569 CYS A 575 1555 1555 2.03 SSBOND 6 CYS B 2036 CYS B 2047 1555 1555 2.03 SSBOND 7 CYS B 2037 CYS B 2159 1555 1555 2.03 SSBOND 8 CYS B 2041 CYS B 2057 1555 1555 2.03 SSBOND 9 CYS B 2059 CYS B 2069 1555 1555 2.03 SSBOND 10 CYS B 2569 CYS B 2575 1555 1555 2.03 LINK ND2 ASN A 68 C1 NAG C 1 1555 1555 1.46 LINK ND2 ASN A 144 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN A 410 C1 NAG A 681 1555 1555 1.47 LINK ND2 ASN B2068 C1 NAG E 1 1555 1555 1.45 LINK ND2 ASN B2144 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN B2410 C1 NAG B2681 1555 1555 1.43 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.40 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.36 LINK O4 NAG D 2 C1 MAN D 3 1555 1555 1.41 LINK O6 MAN D 3 C1 MAN D 4 1555 1555 1.50 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.40 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.34 LINK O4 NAG G 2 C1 MAN G 3 1555 1555 1.40 LINK O6 MAN G 3 C1 MAN G 4 1555 1555 1.49 CISPEP 1 SER A 126 PRO A 127 0 1.27 CISPEP 2 SER B 2126 PRO B 2127 0 0.89 CRYST1 181.036 133.960 124.834 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005524 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007465 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008011 0.00000