PDB Short entry for 1D7D HEADER OXIDOREDUCTASE 16-OCT-99 1D7D TITLE CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, HP3 FRAGMENT, PH 7.5 CAVEAT 1D7D MAN D 3 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELLOBIOSE DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CYTOCHROME TYPE B DOMAIN; COMPND 5 EC: 1.1.3.25 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PHANEROCHAETE CHRYSOSPORIUM; SOURCE 3 ORGANISM_TAXID: 5306; SOURCE 4 TISSUE: SECRETED KEYWDS B-TYPE CYTOCHROME, MET/HIS LIGATION, BETA SANDWICH, FE(II)- KEYWDS 2 PROTOPORPHYRIN IX, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR B.M.HALLBERG,T.BERGFORS,K.BACKBRO,C.DIVNE REVDAT 6 29-JUL-20 1D7D 1 CAVEAT COMPND REMARK HETNAM REVDAT 6 2 1 LINK SITE ATOM REVDAT 5 25-DEC-19 1D7D 1 SEQADV SEQRES LINK REVDAT 4 07-MAR-18 1D7D 1 REMARK REVDAT 3 13-JUL-11 1D7D 1 VERSN REVDAT 2 24-FEB-09 1D7D 1 VERSN REVDAT 1 18-OCT-00 1D7D 0 JRNL AUTH B.M.HALLBERG,T.BERGFORS,K.BACKBRO,G.PETTERSSON,G.HENRIKSSON, JRNL AUTH 2 C.DIVNE JRNL TITL A NEW SCAFFOLD FOR BINDING HAEM IN THE CYTOCHROME DOMAIN OF JRNL TITL 2 THE EXTRACELLULAR FLAVOCYTOCHROME CELLOBIOSE DEHYDROGENASE. JRNL REF STRUCTURE FOLD.DES. V. 8 79 2000 JRNL REFN ISSN 0969-2126 JRNL PMID 10673428 JRNL DOI 10.1016/S0969-2126(00)00082-4 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 46166 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1986 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2836 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 187 REMARK 3 SOLVENT ATOMS : 269 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.001 REMARK 3 BOND ANGLES (DEGREES) : 1.800 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MAXIMUM LIKELIHOOD, BULK SOLVENT REMARK 3 CORRECTION REMARK 4 REMARK 4 1D7D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-OCT-99. REMARK 100 THE DEPOSITION ID IS D_1000009855. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-NOV-98 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I711 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.282 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45909 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.32900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, 2-METHYL-2,4-PENTANEDIOL, REMARK 280 HEPES, CADMIUM CHLORIDE, PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.59333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 17.79667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 26.69500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 8.89833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.49167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A MONOMERIC FLAVOCYTOCHROME REMARK 300 CONSISTING OF A B-TYPE CYTOCHROME DOMAIN LINKED TO A REMARK 300 FLAVODEHYDROGENASE DOMAIN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 145 CB - CG - CD1 ANGL. DEV. = 4.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 92 107.85 -36.85 REMARK 500 ASN A 111 -165.26 -127.40 REMARK 500 SER A 137 -158.27 -129.34 REMARK 500 GLN B 92 108.05 -32.13 REMARK 500 ASN B 111 -159.57 -126.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 502 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 21 O REMARK 620 2 ASP A 24 OD1 88.8 REMARK 620 3 ASP A 24 OD2 89.2 55.2 REMARK 620 4 HOH A1629 O 99.6 82.5 136.7 REMARK 620 5 HEM B 401 O2A 93.2 161.8 142.9 79.3 REMARK 620 6 HEM B 401 O1A 88.1 140.7 85.6 136.5 57.5 REMARK 620 7 HOH B1628 O 172.0 92.4 85.0 88.4 88.1 85.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 65 SD REMARK 620 2 HEM A 401 NA 83.9 REMARK 620 3 HEM A 401 NB 88.2 89.8 REMARK 620 4 HEM A 401 NC 93.8 176.8 92.3 REMARK 620 5 HEM A 401 ND 91.9 90.1 179.9 87.7 REMARK 620 6 HIS A 163 NE2 171.4 88.0 94.6 94.2 85.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 503 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 107 OE2 REMARK 620 2 ASN A 186 OXT 165.6 REMARK 620 3 HOH A1702 O 90.0 78.9 REMARK 620 4 HOH A1742 O 93.5 79.6 99.8 REMARK 620 5 HOH A1743 O 93.8 96.7 174.6 76.2 REMARK 620 6 HOH A1748 O 101.6 87.9 91.9 160.9 91.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 501 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 165 OD1 REMARK 620 2 ASP A 165 OD2 53.9 REMARK 620 3 HOH A1627 O 82.0 99.7 REMARK 620 4 ASP B 165 OD1 119.3 84.9 154.9 REMARK 620 5 ASP B 165 OD2 85.3 96.3 147.9 54.0 REMARK 620 6 HOH B2627 O 158.8 138.9 78.9 81.5 106.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 502 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HEM A 401 O2A REMARK 620 2 HEM A 401 O1A 55.6 REMARK 620 3 PRO B 21 O 96.1 87.1 REMARK 620 4 ASP B 24 OD1 161.9 142.5 86.3 REMARK 620 5 ASP B 24 OD2 142.2 87.6 89.5 55.5 REMARK 620 6 HOH B2628 O 87.7 91.9 174.7 91.2 85.2 REMARK 620 7 HOH B2629 O 82.1 137.6 96.8 79.8 134.4 87.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET B 65 SD REMARK 620 2 HEM B 401 NA 83.5 REMARK 620 3 HEM B 401 NB 89.9 91.9 REMARK 620 4 HEM B 401 NC 94.6 178.0 88.0 REMARK 620 5 HEM B 401 ND 91.6 89.1 178.3 91.1 REMARK 620 6 HIS B 163 NE2 175.4 91.9 90.5 90.1 88.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 503 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 107 OE2 REMARK 620 2 ASN B 186 OXT 172.9 REMARK 620 N 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1D7C RELATED DB: PDB REMARK 900 CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, PH 4.6 REMARK 900 RELATED ID: 1D7B RELATED DB: PDB REMARK 900 CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, PH 7.5 DBREF 1D7D A 1 186 GB 1314367 AAC49277 19 204 DBREF 1D7D B 1 186 GB 1314367 AAC49277 19 204 SEQRES 1 A 186 PCA SER ALA SER GLN PHE THR ASP PRO THR THR GLY PHE SEQRES 2 A 186 GLN PHE THR GLY ILE THR ASP PRO VAL HIS ASP VAL THR SEQRES 3 A 186 TYR GLY PHE VAL PHE PRO PRO LEU ALA THR SER GLY ALA SEQRES 4 A 186 GLN SER THR GLU PHE ILE GLY GLU VAL VAL ALA PRO ILE SEQRES 5 A 186 ALA SER LYS TRP ILE GLY ILE ALA LEU GLY GLY ALA MET SEQRES 6 A 186 ASN ASN ASP LEU LEU LEU VAL ALA TRP ALA ASN GLY ASN SEQRES 7 A 186 GLN ILE VAL SER SER THR ARG TRP ALA THR GLY TYR VAL SEQRES 8 A 186 GLN PRO THR ALA TYR THR GLY THR ALA THR LEU THR THR SEQRES 9 A 186 LEU PRO GLU THR THR ILE ASN SER THR HIS TRP LYS TRP SEQRES 10 A 186 VAL PHE ARG CYS GLN GLY CYS THR GLU TRP ASN ASN GLY SEQRES 11 A 186 GLY GLY ILE ASP VAL THR SER GLN GLY VAL LEU ALA TRP SEQRES 12 A 186 ALA PHE SER ASN VAL ALA VAL ASP ASP PRO SER ASP PRO SEQRES 13 A 186 GLN SER THR PHE SER GLU HIS THR ASP PHE GLY PHE PHE SEQRES 14 A 186 GLY ILE ASP TYR SER THR ALA HIS SER ALA ASN TYR GLN SEQRES 15 A 186 ASN TYR LEU ASN SEQRES 1 B 186 PCA SER ALA SER GLN PHE THR ASP PRO THR THR GLY PHE SEQRES 2 B 186 GLN PHE THR GLY ILE THR ASP PRO VAL HIS ASP VAL THR SEQRES 3 B 186 TYR GLY PHE VAL PHE PRO PRO LEU ALA THR SER GLY ALA SEQRES 4 B 186 GLN SER THR GLU PHE ILE GLY GLU VAL VAL ALA PRO ILE SEQRES 5 B 186 ALA SER LYS TRP ILE GLY ILE ALA LEU GLY GLY ALA MET SEQRES 6 B 186 ASN ASN ASP LEU LEU LEU VAL ALA TRP ALA ASN GLY ASN SEQRES 7 B 186 GLN ILE VAL SER SER THR ARG TRP ALA THR GLY TYR VAL SEQRES 8 B 186 GLN PRO THR ALA TYR THR GLY THR ALA THR LEU THR THR SEQRES 9 B 186 LEU PRO GLU THR THR ILE ASN SER THR HIS TRP LYS TRP SEQRES 10 B 186 VAL PHE ARG CYS GLN GLY CYS THR GLU TRP ASN ASN GLY SEQRES 11 B 186 GLY GLY ILE ASP VAL THR SER GLN GLY VAL LEU ALA TRP SEQRES 12 B 186 ALA PHE SER ASN VAL ALA VAL ASP ASP PRO SER ASP PRO SEQRES 13 B 186 GLN SER THR PHE SER GLU HIS THR ASP PHE GLY PHE PHE SEQRES 14 B 186 GLY ILE ASP TYR SER THR ALA HIS SER ALA ASN TYR GLN SEQRES 15 B 186 ASN TYR LEU ASN MODRES 1D7D ASN A 111 ASN GLYCOSYLATION SITE MODRES 1D7D ASN B 111 ASN GLYCOSYLATION SITE MODRES 1D7D PCA A 1 GLN PYROGLUTAMIC ACID MODRES 1D7D PCA B 1 GLN PYROGLUTAMIC ACID HET PCA A 1 8 HET PCA B 1 8 HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET NAG D 1 14 HET NAG D 2 14 HET MAN D 3 11 HET CD A 502 1 HET CD A 503 1 HET CD A 504 1 HET CD A 501 1 HET HEM A 401 43 HET CD B 502 1 HET CD B 503 1 HET HEM B 401 43 HET 1PG B 402 17 HETNAM PCA PYROGLUTAMIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM CD CADMIUM ION HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM 1PG 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)- HETNAM 2 1PG ETHANOL HETSYN HEM HEME FORMUL 1 PCA 2(C5 H7 N O3) FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 4 MAN C6 H12 O6 FORMUL 5 CD 6(CD 2+) FORMUL 9 HEM 2(C34 H32 FE N4 O4) FORMUL 13 1PG C11 H24 O6 FORMUL 14 HOH *269(H2 O) HELIX 1 1 SER A 174 ALA A 176 5 3 HELIX 2 2 ASN A 180 ASN A 186 1 7 HELIX 3 3 SER B 174 ALA B 176 5 3 HELIX 4 4 ASN B 180 ASN B 186 1 7 SHEET 1 A 6 SER A 4 THR A 7 0 SHEET 2 A 6 GLN A 14 ASP A 20 -1 N PHE A 15 O PHE A 6 SHEET 3 A 6 VAL A 25 VAL A 30 -1 O VAL A 25 N ASP A 20 SHEET 4 A 6 PHE A 44 PRO A 51 -1 N ILE A 45 O VAL A 30 SHEET 5 A 6 HIS A 114 GLN A 122 -1 N TRP A 115 O ALA A 50 SHEET 6 A 6 THR A 101 THR A 104 -1 O THR A 101 N GLN A 122 SHEET 1 A1 6 SER A 4 THR A 7 0 SHEET 2 A1 6 GLN A 14 ASP A 20 -1 N PHE A 15 O PHE A 6 SHEET 3 A1 6 VAL A 25 VAL A 30 -1 O VAL A 25 N ASP A 20 SHEET 4 A1 6 PHE A 44 PRO A 51 -1 N ILE A 45 O VAL A 30 SHEET 5 A1 6 HIS A 114 GLN A 122 -1 N TRP A 115 O ALA A 50 SHEET 6 A1 6 THR A 109 ILE A 110 -1 O THR A 109 N LYS A 116 SHEET 1 B 6 THR A 94 ALA A 95 0 SHEET 2 B 6 GLN A 79 TRP A 86 -1 O TRP A 86 N THR A 94 SHEET 3 B 6 LEU A 70 ASN A 76 -1 O LEU A 70 N ARG A 85 SHEET 4 B 6 TRP A 56 ALA A 60 -1 N ILE A 57 O ALA A 73 SHEET 5 B 6 GLN A 138 SER A 146 -1 O ALA A 142 N ALA A 60 SHEET 6 B 6 ASP A 165 ASP A 172 -1 O ASP A 165 N PHE A 145 SHEET 1 C 6 SER B 4 THR B 7 0 SHEET 2 C 6 GLN B 14 ASP B 20 -1 N PHE B 15 O PHE B 6 SHEET 3 C 6 VAL B 25 VAL B 30 -1 O VAL B 25 N ASP B 20 SHEET 4 C 6 PHE B 44 PRO B 51 -1 O ILE B 45 N VAL B 30 SHEET 5 C 6 HIS B 114 GLN B 122 -1 O TRP B 115 N ALA B 50 SHEET 6 C 6 THR B 101 THR B 104 -1 O THR B 101 N GLN B 122 SHEET 1 C1 6 SER B 4 THR B 7 0 SHEET 2 C1 6 GLN B 14 ASP B 20 -1 N PHE B 15 O PHE B 6 SHEET 3 C1 6 VAL B 25 VAL B 30 -1 O VAL B 25 N ASP B 20 SHEET 4 C1 6 PHE B 44 PRO B 51 -1 O ILE B 45 N VAL B 30 SHEET 5 C1 6 HIS B 114 GLN B 122 -1 O TRP B 115 N ALA B 50 SHEET 6 C1 6 THR B 109 ILE B 110 -1 O THR B 109 N LYS B 116 SHEET 1 D 6 THR B 94 ALA B 95 0 SHEET 2 D 6 GLN B 79 TRP B 86 -1 O TRP B 86 N THR B 94 SHEET 3 D 6 LEU B 70 ASN B 76 -1 O LEU B 70 N ARG B 85 SHEET 4 D 6 TRP B 56 ALA B 60 -1 O ILE B 57 N ALA B 73 SHEET 5 D 6 GLN B 138 SER B 146 -1 O ALA B 142 N ALA B 60 SHEET 6 D 6 ASP B 165 ASP B 172 -1 O ASP B 165 N PHE B 145 SSBOND 1 CYS A 121 CYS A 124 1555 1555 2.00 SSBOND 2 CYS B 121 CYS B 124 1555 1555 1.99 LINK C PCA A 1 N SER A 2 1555 1555 1.33 LINK ND2 ASN A 111 C1 NAG C 1 1555 1555 1.45 LINK C PCA B 1 N SER B 2 1555 1555 1.32 LINK ND2 ASN B 111 C1 NAG D 1 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.38 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.39 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.39 LINK O4 NAG D 2 C1 MAN D 3 1555 1555 1.39 LINK O PRO A 21 CD CD A 502 1555 1555 2.34 LINK OD1 ASP A 24 CD CD A 502 1555 1555 2.32 LINK OD2 ASP A 24 CD CD A 502 1555 1555 2.43 LINK SD MET A 65 FE HEM A 401 1555 1555 2.34 LINK OE2 GLU A 107 CD CD A 503 1555 1555 2.29 LINK NE2 HIS A 163 FE HEM A 401 1555 1555 2.05 LINK OD1 ASP A 165 CD CD A 501 1555 1555 2.43 LINK OD2 ASP A 165 CD CD A 501 1555 1555 2.42 LINK OXT ASN A 186 CD CD A 503 1555 1555 2.35 LINK O ASN A 186 CD CD A 504 2654 1555 2.90 LINK O2A HEM A 401 CD CD B 502 1555 1555 2.51 LINK O1A HEM A 401 CD CD B 502 1555 1555 2.26 LINK CD CD A 501 O HOH A1627 1555 1555 2.44 LINK CD CD A 501 OD1 ASP B 165 1555 1555 2.51 LINK CD CD A 501 OD2 ASP B 165 1555 1555 2.30 LINK CD CD A 501 O HOH B2627 1555 1555 2.42 LINK CD CD A 502 O HOH A1629 1555 1555 1.91 LINK CD CD A 502 O2A HEM B 401 1555 1555 2.49 LINK CD CD A 502 O1A HEM B 401 1555 1555 2.01 LINK CD CD A 502 O HOH B1628 1555 1555 2.13 LINK CD CD A 503 O HOH A1702 1555 1555 2.34 LINK CD CD A 503 O HOH A1742 1555 1555 2.18 LINK CD CD A 503 O HOH A1743 1555 1555 2.20 LINK CD CD A 503 O HOH A1748 1555 1555 2.38 LINK O PRO B 21 CD CD B 502 1555 1555 2.37 LINK OD1 ASP B 24 CD CD B 502 1555 1555 2.36 LINK OD2 ASP B 24 CD CD B 502 1555 1555 2.41 LINK SD MET B 65 FE HEM B 401 1555 1555 2.34 LINK OE2 GLU B 107 CD CD B 503 1555 1555 2.48 LINK NE2 HIS B 163 FE HEM B 401 1555 1555 2.04 LINK OXT ASN B 186 CD CD B 503 1555 1555 2.15 LINK CD CD B 502 O HOH B2628 1555 1555 2.34 LINK CD CD B 502 O HOH B2629 1555 1555 1.70 CRYST1 138.300 138.300 53.390 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007231 0.004175 0.000000 0.00000 SCALE2 0.000000 0.008349 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018730 0.00000 HETATM 1 N PCA A 1 37.254 47.289 25.231 1.00 18.13 N HETATM 2 CA PCA A 1 38.003 48.540 25.384 1.00 20.82 C HETATM 3 CB PCA A 1 38.773 48.441 26.702 1.00 20.85 C HETATM 4 CG PCA A 1 37.954 47.453 27.484 1.00 16.07 C HETATM 5 CD PCA A 1 37.274 46.614 26.385 1.00 18.12 C HETATM 6 OE PCA A 1 36.739 45.479 26.541 1.00 19.67 O HETATM 7 C PCA A 1 38.918 48.818 24.184 1.00 20.65 C HETATM 8 O PCA A 1 39.195 47.929 23.374 1.00 23.07 O