PDB Short entry for 1D9I
HEADER    HYDROLASE/HYDROLASE INHIBITOR           27-OCT-99   1D9I              
TITLE     STRUCTURE OF THROMBIN COMPLEXED WITH SELECTIVE NON-ELECTOPHILIC       
TITLE    2 INHIBITORS HAVING CYCLOHEXYL MOIETIES AT P1                          
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: THROMBIN;                                                  
COMPND   3 CHAIN: A;                                                            
COMPND   4 EC: 3.4.21.5;                                                        
COMPND   5 MOL_ID: 2;                                                           
COMPND   6 MOLECULE: HIRUGEN;                                                   
COMPND   7 CHAIN: I;                                                            
COMPND   8 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 MOL_ID: 2;                                                           
SOURCE   6 SYNTHETIC: YES;                                                      
SOURCE   7 ORGANISM_SCIENTIFIC: HIRUDO MEDICINALIS;                             
SOURCE   8 ORGANISM_TAXID: 6421;                                                
SOURCE   9 OTHER_DETAILS: THIS SEQUENCE WAS CHEMICALLY SYNTHESIZED              
KEYWDS    GLOBULAR, HYDROLASE-HYDROLASE INHIBITOR COMPLEX                       
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    R.KRISHNAN,I.MOCHALKIN,R.ARNI,A.TULINSKY                              
REVDAT   5   04-OCT-17 1D9I    1       REMARK                                   
REVDAT   4   13-JUL-11 1D9I    1       VERSN                                    
REVDAT   3   24-FEB-09 1D9I    1       VERSN                                    
REVDAT   2   01-APR-03 1D9I    1       JRNL                                     
REVDAT   1   30-OCT-00 1D9I    0                                                
JRNL        AUTH   R.KRISHNAN,I.MOCHALKIN,R.ARNI,A.TULINSKY                     
JRNL        TITL   STRUCTURE OF THROMBIN COMPLEXED WITH SELECTIVE               
JRNL        TITL 2 NON-ELECTROPHILIC INHIBITORS HAVING CYCLOHEXYL MOIETIES AT   
JRNL        TITL 3 P1.                                                          
JRNL        REF    ACTA CRYSTALLOGR.,SECT.D      V.  56   294 2000              
JRNL        REFN                   ISSN 0907-4449                               
JRNL        PMID   10713516                                                     
JRNL        DOI    10.1107/S0907444900000068                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.30 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PROFFT                                               
REMARK   3   AUTHORS     : KONNERT,HENDRICKSON,FINZEL                           
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 8.00                           
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 1.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : NULL                           
REMARK   3   NUMBER OF REFLECTIONS             : 9092                           
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : NULL                            
REMARK   3   FREE R VALUE TEST SET SELECTION  : NULL                            
REMARK   3   R VALUE     (WORKING + TEST SET) : NULL                            
REMARK   3   R VALUE            (WORKING SET) : 0.153                           
REMARK   3   FREE R VALUE                     : NULL                            
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : NULL                            
REMARK   3   FREE R VALUE TEST SET COUNT      : NULL                            
REMARK   3                                                                      
REMARK   3  FIT/AGREEMENT OF MODEL WITH ALL DATA.                               
REMARK   3   R VALUE   (WORKING + TEST SET, NO CUTOFF) : NULL                   
REMARK   3   R VALUE          (WORKING SET, NO CUTOFF) : NULL                   
REMARK   3   FREE R VALUE                  (NO CUTOFF) : NULL                   
REMARK   3   FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL                   
REMARK   3   FREE R VALUE TEST SET COUNT   (NO CUTOFF) : NULL                   
REMARK   3   TOTAL NUMBER OF REFLECTIONS   (NO CUTOFF) : 9294                   
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2340                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 35                                      
REMARK   3   SOLVENT ATOMS            : 98                                      
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : NULL                            
REMARK   3   ESD FROM SIGMAA              (A) : NULL                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : NULL                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   DISTANCE RESTRAINTS.                    RMS    SIGMA               
REMARK   3    BOND LENGTH                     (A) : 0.016 ; NULL                
REMARK   3    ANGLE DISTANCE                  (A) : 0.040 ; NULL                
REMARK   3    INTRAPLANAR 1-4 DISTANCE        (A) : NULL  ; NULL                
REMARK   3    H-BOND OR METAL COORDINATION    (A) : NULL  ; NULL                
REMARK   3                                                                      
REMARK   3   PLANE RESTRAINT                  (A) : NULL  ; NULL                
REMARK   3   CHIRAL-CENTER RESTRAINT       (A**3) : NULL  ; NULL                
REMARK   3                                                                      
REMARK   3   NON-BONDED CONTACT RESTRAINTS.                                     
REMARK   3    SINGLE TORSION                  (A) : NULL  ; NULL                
REMARK   3    MULTIPLE TORSION                (A) : NULL  ; NULL                
REMARK   3    H-BOND (X...Y)                  (A) : NULL  ; NULL                
REMARK   3    H-BOND (X-H...Y)                (A) : NULL  ; NULL                
REMARK   3                                                                      
REMARK   3   CONFORMATIONAL TORSION ANGLE RESTRAINTS.                           
REMARK   3    SPECIFIED                 (DEGREES) : NULL  ; NULL                
REMARK   3    PLANAR                    (DEGREES) : NULL  ; NULL                
REMARK   3    STAGGERED                 (DEGREES) : NULL  ; NULL                
REMARK   3    TRANSVERSE                (DEGREES) : NULL  ; NULL                
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND               (A**2) : NULL  ; NULL                
REMARK   3   MAIN-CHAIN ANGLE              (A**2) : NULL  ; NULL                
REMARK   3   SIDE-CHAIN BOND               (A**2) : NULL  ; NULL                
REMARK   3   SIDE-CHAIN ANGLE              (A**2) : NULL  ; NULL                
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1D9I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-OCT-99.                  
REMARK 100 THE DEPOSITION ID IS D_1000009912.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 10-JAN-99                          
REMARK 200  TEMPERATURE           (KELVIN) : 143                                
REMARK 200  PH                             : 7.3                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : RIGAKU RU200                       
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.54                               
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : IMAGE PLATE                        
REMARK 200  DETECTOR MANUFACTURER          : RIGAKU                             
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : R-AXIS                             
REMARK 200  DATA SCALING SOFTWARE          : R-AXIS                             
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 9294                               
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.300                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 20.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 57.0                               
REMARK 200  DATA REDUNDANCY                : 1.600                              
REMARK 200  R MERGE                    (I) : 0.05800                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : NULL                               
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.50                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 38.0                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.13100                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL                         
REMARK 200 SOFTWARE USED: X-PLOR                                                
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 54.16                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG 8000 IN 0.1M SODIUM PHOSPHATE    
REMARK 280  BUFFER, PROTEIN CONCENTRATION: 3.5 MG/ML, PH 7.3, VAPOR             
REMARK 280  DIFFUSION, HANGING DROP, TEMPERATURE 298K                           
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y,-Z                                                 
REMARK 290       3555   X+1/2,Y+1/2,Z                                           
REMARK 290       4555   -X+1/2,Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   3  1.000000  0.000000  0.000000       35.73000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       36.09500            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000       35.73000            
REMARK 290   SMTRY2   4  0.000000  1.000000  0.000000       36.09500            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 1470 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 12600 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, I                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375      HOH A 525  LIES ON A SPECIAL POSITION.                          
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLY A    14M                                                     
REMARK 465     ARG A    14N                                                     
REMARK 465     TRP A   147A                                                     
REMARK 465     THR A   147B                                                     
REMARK 465     ALA A   147C                                                     
REMARK 465     ASN A   147D                                                     
REMARK 465     VAL A   147E                                                     
REMARK 465     GLY A   147F                                                     
REMARK 465     LYS A   147G                                                     
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     LYS A 236    CG   CD   CE   NZ                                   
REMARK 470     GLU I 358    CB   CG   CD   OE1  OE2                             
REMARK 470     GLU I 362    CB   CG   CD   OE1  OE2                             
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   CB   ASP A     1A    O    HOH A   566              1.87            
REMARK 500   O    ALA A   183     O    HOH A   445              2.19            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC             
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT.  AN ATOM LOCATED WITHIN 0.15          
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A           
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375             
REMARK 500 INSTEAD OF REMARK 500.  ATOMS WITH NON-BLANK ALTERNATE               
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.            
REMARK 500                                                                      
REMARK 500 DISTANCE CUTOFF:                                                     
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS              
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS                  
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI  SSYMOP   DISTANCE          
REMARK 500   O    ASP A    14L    NH2  ARG A   173     4556     2.10            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    ASP A   1A  CB  -  CG  -  OD1 ANGL. DEV. =   7.5 DEGREES          
REMARK 500    ASP A   1A  CB  -  CG  -  OD2 ANGL. DEV. =  -8.3 DEGREES          
REMARK 500    ARG A   4   NE  -  CZ  -  NH2 ANGL. DEV. =   3.6 DEGREES          
REMARK 500    GLU A  13   CB  -  CA  -  C   ANGL. DEV. = -12.3 DEGREES          
REMARK 500    ARG A  14D  NE  -  CZ  -  NH1 ANGL. DEV. =   4.7 DEGREES          
REMARK 500    ASP A  21   CB  -  CG  -  OD1 ANGL. DEV. =   6.9 DEGREES          
REMARK 500    ARG A  35   NE  -  CZ  -  NH1 ANGL. DEV. =   4.5 DEGREES          
REMARK 500    LEU A  41   CB  -  CA  -  C   ANGL. DEV. =  11.8 DEGREES          
REMARK 500    LEU A  41   CA  -  CB  -  CG  ANGL. DEV. =  14.2 DEGREES          
REMARK 500    CYS A  42   CA  -  CB  -  SG  ANGL. DEV. =  11.5 DEGREES          
REMARK 500    ASP A  49   CB  -  CG  -  OD1 ANGL. DEV. =   5.8 DEGREES          
REMARK 500    ASP A  49   CB  -  CG  -  OD2 ANGL. DEV. =  -6.8 DEGREES          
REMARK 500    ARG A  50   NE  -  CZ  -  NH1 ANGL. DEV. =   5.3 DEGREES          
REMARK 500    GLU A  61   O   -  C   -  N   ANGL. DEV. = -12.6 DEGREES          
REMARK 500    ARG A  67   CD  -  NE  -  CZ  ANGL. DEV. =   9.8 DEGREES          
REMARK 500    ARG A  67   NE  -  CZ  -  NH1 ANGL. DEV. =   5.2 DEGREES          
REMARK 500    ARG A  75   NE  -  CZ  -  NH2 ANGL. DEV. =   4.4 DEGREES          
REMARK 500    ARG A  77A  NE  -  CZ  -  NH2 ANGL. DEV. =  -6.3 DEGREES          
REMARK 500    ARG A  97   NE  -  CZ  -  NH1 ANGL. DEV. =   3.6 DEGREES          
REMARK 500    ARG A  97   NE  -  CZ  -  NH2 ANGL. DEV. =  -3.2 DEGREES          
REMARK 500    ARG A 101   NE  -  CZ  -  NH1 ANGL. DEV. =   4.1 DEGREES          
REMARK 500    ARG A 101   NE  -  CZ  -  NH2 ANGL. DEV. =  -3.5 DEGREES          
REMARK 500    ALA A 113   N   -  CA  -  CB  ANGL. DEV. =   9.2 DEGREES          
REMARK 500    ASP A 125   CB  -  CG  -  OD1 ANGL. DEV. =   5.6 DEGREES          
REMARK 500    TYR A 134   CB  -  CG  -  CD1 ANGL. DEV. =  -3.8 DEGREES          
REMARK 500    ARG A 137   NE  -  CZ  -  NH1 ANGL. DEV. =  10.0 DEGREES          
REMARK 500    ARG A 137   NE  -  CZ  -  NH2 ANGL. DEV. =  -7.6 DEGREES          
REMARK 500    ARG A 165   NE  -  CZ  -  NH2 ANGL. DEV. =  -3.1 DEGREES          
REMARK 500    ARG A 173   NE  -  CZ  -  NH2 ANGL. DEV. =  -3.2 DEGREES          
REMARK 500    ARG A 175   NE  -  CZ  -  NH2 ANGL. DEV. =   3.4 DEGREES          
REMARK 500    CYS A 182   CA  -  CB  -  SG  ANGL. DEV. =   7.1 DEGREES          
REMARK 500    ARG A 187   NE  -  CZ  -  NH2 ANGL. DEV. =   4.5 DEGREES          
REMARK 500    ARG A 206   NE  -  CZ  -  NH2 ANGL. DEV. =   3.5 DEGREES          
REMARK 500    ARG A 221A  CD  -  NE  -  CZ  ANGL. DEV. =  -9.5 DEGREES          
REMARK 500    TYR A 228   CB  -  CG  -  CD1 ANGL. DEV. =   4.4 DEGREES          
REMARK 500    ARG A 233   NE  -  CZ  -  NH1 ANGL. DEV. =   3.2 DEGREES          
REMARK 500    ASP I 355   CB  -  CG  -  OD1 ANGL. DEV. =   7.2 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    PHE A   7      -91.54   -133.10                                   
REMARK 500    SER A  11       33.97     70.22                                   
REMARK 500    TYR A  14J       2.70    -64.32                                   
REMARK 500    ILE A  14K      29.88     81.36                                   
REMARK 500    ASN A  60G      83.91   -174.90                                   
REMARK 500    GLU A  61       29.07    -73.31                                   
REMARK 500    HIS A  71      -71.31   -134.93                                   
REMARK 500    GLU A  77       86.35    -65.15                                   
REMARK 500    ARG A  77A     -68.06    -24.22                                   
REMARK 500    ARG A  93       43.48   -104.03                                   
REMARK 500    ASN A  95       71.23   -100.02                                   
REMARK 500    GLU A  97A     -55.45   -124.79                                   
REMARK 500    ASP A 170        3.07    -69.86                                   
REMARK 500    CYS A 191     -167.43   -163.12                                   
REMARK 500    SER A 195      154.36    -45.04                                   
REMARK 500    ASN A 205       59.03     27.63                                   
REMARK 500    VAL A 213      109.97    -54.32                                   
REMARK 500    SER A 214      -72.05   -101.39                                   
REMARK 500    PRO I 360      106.73    -37.50                                   
REMARK 500    GLU I 361      -12.81    -48.29                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500    ARG A  93         0.10    SIDE CHAIN                              
REMARK 500    ARG A 126         0.12    SIDE CHAIN                              
REMARK 500    ARG A 187         0.16    SIDE CHAIN                              
REMARK 500    ARG A 221A        0.36    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY                                       
REMARK 500                                                                      
REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY                       
REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER                 
REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME;                     
REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;                            
REMARK 500 I=INSERTION CODE).                                                   
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        ANGLE                                           
REMARK 500    LEU A  59        -10.15                                           
REMARK 500    GLU A  61        -17.03                                           
REMARK 500    TRP A 207         15.96                                           
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              NA A 950  NA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 LYS A 169   O                                                      
REMARK 620 2 THR A 172   O    77.5                                              
REMARK 620 3 PHE A 204A  O   115.7  99.5                                        
REMARK 620 N                    1     2                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 950                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 951                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 00P A 380                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN I OF HIRUGEN                
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1D6W   RELATED DB: PDB                                   
REMARK 900 THROMBIN SELECTIVE NON-ELECTOPHILIC INHIBITOR MOL592                 
DBREF  1D9I A    1B  246  UNP    P00734   THRB_HUMAN     334    621             
DBREF  1D9I I  355   364  UNP    P28504   HIR2_HIRME      55     64             
SEQRES   1 A  288  ALA ASP CYS GLY LEU ARG PRO LEU PHE GLU LYS LYS SER          
SEQRES   2 A  288  LEU GLU ASP LYS THR GLU ARG GLU LEU LEU GLU SER TYR          
SEQRES   3 A  288  ILE ASP GLY ARG ILE VAL GLU GLY SER ASP ALA GLU ILE          
SEQRES   4 A  288  GLY MET SER PRO TRP GLN VAL MET LEU PHE ARG LYS SER          
SEQRES   5 A  288  PRO GLN GLU LEU LEU CYS GLY ALA SER LEU ILE SER ASP          
SEQRES   6 A  288  ARG TRP VAL LEU THR ALA ALA HIS CYS LEU LEU TYR PRO          
SEQRES   7 A  288  PRO TRP ASP LYS ASN PHE THR GLU ASN ASP LEU LEU VAL          
SEQRES   8 A  288  ARG ILE GLY LYS HIS SER ARG THR ARG TYR GLU ARG ASN          
SEQRES   9 A  288  ILE GLU LYS ILE SER MET LEU GLU LYS ILE TYR ILE HIS          
SEQRES  10 A  288  PRO ARG TYR ASN TRP ARG GLU ASN LEU ASP ARG ASP ILE          
SEQRES  11 A  288  ALA LEU MET LYS LEU LYS LYS PRO VAL ALA PHE SER ASP          
SEQRES  12 A  288  TYR ILE HIS PRO VAL CYS LEU PRO ASP ARG GLU THR ALA          
SEQRES  13 A  288  ALA SER LEU LEU GLN ALA GLY TYR LYS GLY ARG VAL THR          
SEQRES  14 A  288  GLY TRP GLY ASN LEU LYS GLU THR TRP THR ALA ASN VAL          
SEQRES  15 A  288  GLY LYS GLY GLN PRO SER VAL LEU GLN VAL VAL ASN LEU          
SEQRES  16 A  288  PRO ILE VAL GLU ARG PRO VAL CYS LYS ASP SER THR ARG          
SEQRES  17 A  288  ILE ARG ILE THR ASP ASN MET PHE CYS ALA GLY TYR LYS          
SEQRES  18 A  288  PRO ASP GLU GLY LYS ARG GLY ASP ALA CYS GLU GLY ASP          
SEQRES  19 A  288  SER GLY GLY PRO PHE VAL MET LYS SER PRO PHE ASN ASN          
SEQRES  20 A  288  ARG TRP TYR GLN MET GLY ILE VAL SER TRP GLY GLU GLY          
SEQRES  21 A  288  CYS ASP ARG ASP GLY LYS TYR GLY PHE TYR THR HIS VAL          
SEQRES  22 A  288  PHE ARG LEU LYS LYS TRP ILE GLN LYS VAL ILE ASP GLN          
SEQRES  23 A  288  PHE GLY                                                      
SEQRES   1 I   10  ASP PHE GLU GLU ILE PRO GLU GLU TYS LEU                      
MODRES 1D9I TYS I  363  TYR  O-SULFO-L-TYROSINE                                 
HET    TYS  I 363      16                                                       
HET     NA  A 950       1                                                       
HET     NA  A 951       1                                                       
HET    00P  A 380      33                                                       
HETNAM     TYS O-SULFO-L-TYROSINE                                               
HETNAM      NA SODIUM ION                                                       
HETNAM     00P (5S)-N-[(TRANS-4-AMINOCYCLOHEXYL)METHYL]-1,3-DIOXO-2-            
HETNAM   2 00P  [2-(PHENYLSULFONYL)ETHYL]-2,3,5,8-TETRAHYDRO-1H-[1,2,           
HETNAM   3 00P  4]TRIAZOLO[1,2-A]PYRIDAZINE-5-CARBOXAMIDE                       
FORMUL   2  TYS    C9 H11 N O6 S                                                
FORMUL   3   NA    2(NA 1+)                                                     
FORMUL   5  00P    C22 H29 N5 O5 S                                              
FORMUL   6  HOH   *98(H2 O)                                                     
HELIX    1   1 THR A   14B GLU A   14H 1                                   7    
HELIX    2   2 ALA A   55  CYS A   58  5                                   4    
HELIX    3   3 PRO A   60B ASP A   60E 5                                   4    
HELIX    4   4 GLU A  127  LEU A  130  1                                   7    
HELIX    5   5 GLU A  164  ASP A  170  1                                   7    
HELIX    6   6 LEU A  234  GLY A  246  1                                  13    
SHEET    1   A 8 SER A  20  ASP A  21  0                                        
SHEET    2   A 8 GLN A 156  VAL A 163 -1  O  VAL A 157   N  SER A  20           
SHEET    3   A 8 LYS A 135  GLY A 140 -1  N  GLY A 136   O  LEU A 160           
SHEET    4   A 8 PRO A 198  LYS A 202 -1  O  PRO A 198   N  THR A 139           
SHEET    5   A 8 TRP A 207  TRP A 215 -1  N  TYR A 208   O  MET A 201           
SHEET    6   A 8 GLY A 226  HIS A 230 -1  N  PHE A 227   O  TRP A 215           
SHEET    7   A 8 MET A 180  ALA A 183 -1  O  PHE A 181   N  TYR A 228           
SHEET    8   A 8 GLN A 156  VAL A 163 -1  N  VAL A 163   O  CYS A 182           
SHEET    1   B 7 LYS A  81  SER A  83  0                                        
SHEET    2   B 7 LEU A  64  ILE A  68 -1  O  VAL A  66   N  SER A  83           
SHEET    3   B 7 GLN A  30  ARG A  35 -1  O  MET A  32   N  ARG A  67           
SHEET    4   B 7 GLU A  39  LEU A  46 -1  O  GLU A  39   N  ARG A  35           
SHEET    5   B 7 TRP A  51  THR A  54 -1  N  LEU A  53   O  SER A  45           
SHEET    6   B 7 ALA A 104  LEU A 108 -1  O  ALA A 104   N  THR A  54           
SHEET    7   B 7 LEU A  85  ILE A  90 -1  N  GLU A  86   O  LYS A 107           
SHEET    1   C 2 LEU A  60  TYR A  60A 0                                        
SHEET    2   C 2 LYS A  60F ASN A  60G 0                                        
SSBOND   1 CYS A    1    CYS A  122                          1555   1555  2.01  
SSBOND   2 CYS A   42    CYS A   58                          1555   1555  2.04  
SSBOND   3 CYS A  168    CYS A  182                          1555   1555  2.03  
SSBOND   4 CYS A  191    CYS A  220                          1555   1555  2.03  
LINK        NA    NA A 950                 O   LYS A 169     1555   1555  2.35  
LINK        NA    NA A 950                 O   THR A 172     1555   1555  2.56  
LINK        NA    NA A 951                 O   LYS A 224     1555   1555  2.51  
LINK         C   GLU I 362                 N   TYS I 363     1555   1555  1.31  
LINK         C   TYS I 363                 N   LEU I 364     1555   1555  1.31  
LINK        NA    NA A 950                 O   PHE A 204A    1555   4546  2.09  
CISPEP   1 SER A   36A   PRO A   37          0        -0.30                     
SITE     1 AC1  3 LYS A 169  THR A 172  PHE A 204A                              
SITE     1 AC2  3 ASP A 221  ARG A 221A LYS A 224                               
SITE     1 AC3 18 HIS A  57  TYR A  60A TRP A  60D ILE A 174                    
SITE     2 AC3 18 ASP A 189  ALA A 190  CYS A 191  GLU A 192                    
SITE     3 AC3 18 SER A 195  VAL A 213  SER A 214  TRP A 215                    
SITE     4 AC3 18 GLY A 216  GLU A 217  GLY A 219  CYS A 220                    
SITE     5 AC3 18 HOH A 603  HOH A 637                                          
SITE     1 AC4 12 PHE A  34  LYS A  36  GLN A  38  LEU A  65                    
SITE     2 AC4 12 ARG A  73  THR A  74  ARG A  75  TYR A  76                    
SITE     3 AC4 12 LYS A  81  ILE A  82  HOH I 629  HOH I 630                    
CRYST1   71.460   72.190   73.120  90.00 100.70  90.00 C 1 2 1       4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.013994  0.000000  0.002644        0.00000                         
SCALE2      0.000000  0.013852  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.013918        0.00000