PDB Short entry for 1DDF HEADER DEATH DOMAIN 08-NOV-96 1DDF TITLE FAS DEATH DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAS; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 ORGAN: FETAL LIVER; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HMS174 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET30B; SOURCE 10 OTHER_DETAILS: METHIONINE RESIDUE ADDED TO N-TERMINUS, AN LEHHHHHH SOURCE 11 HISTIDINE TAG WAS ADDED AT THE C-TERMINUS FOR EASE OF PURIFICATION KEYWDS DEATH DOMAIN, APOPTOSIS, RECEPTOR, GLYCOPROTEIN, TRANSMEMBRANE EXPDTA SOLUTION NMR AUTHOR B.HUANG,M.EBERSTADT,E.OLEJNICZAK,R.P.MEADOWS,S.FESIK REVDAT 3 16-FEB-22 1DDF 1 REMARK REVDAT 2 24-FEB-09 1DDF 1 VERSN REVDAT 1 12-NOV-97 1DDF 0 JRNL AUTH B.HUANG,M.EBERSTADT,E.T.OLEJNICZAK,R.P.MEADOWS,S.W.FESIK JRNL TITL NMR STRUCTURE AND MUTAGENESIS OF THE FAS (APO-1/CD95) DEATH JRNL TITL 2 DOMAIN. JRNL REF NATURE V. 384 638 1996 JRNL REFN ISSN 0028-0836 JRNL PMID 8967952 JRNL DOI 10.1038/384638A0 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1DDF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000172742. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : 4.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 202 -17.59 88.65 REMARK 500 THR A 203 169.12 57.57 REMARK 500 ILE A 206 161.24 66.09 REMARK 500 ASN A 207 11.24 -142.82 REMARK 500 LEU A 208 51.84 -90.50 REMARK 500 ASP A 210 41.62 -103.86 REMARK 500 LEU A 213 108.39 -57.30 REMARK 500 SER A 214 -35.34 173.80 REMARK 500 PHE A 232 -71.70 -68.69 REMARK 500 LYS A 235 39.21 -95.95 REMARK 500 ASN A 236 26.05 -143.59 REMARK 500 ASN A 239 125.77 65.90 REMARK 500 LYS A 247 -60.37 -90.25 REMARK 500 ASN A 250 69.95 -156.35 REMARK 500 ALA A 255 -78.98 -80.89 REMARK 500 HIS A 269 -88.57 -88.46 REMARK 500 LYS A 271 -80.17 -170.55 REMARK 500 ALA A 285 30.85 -97.81 REMARK 500 LEU A 287 -65.71 -136.92 REMARK 500 THR A 289 -44.24 -139.02 REMARK 500 ASP A 305 30.51 -98.54 REMARK 500 SER A 306 -40.58 -173.20 REMARK 500 ASN A 308 -160.04 -127.97 REMARK 500 SER A 309 55.35 -173.87 REMARK 500 ASN A 310 59.38 -149.95 REMARK 500 ILE A 315 -46.39 -149.00 REMARK 500 GLN A 316 -91.55 -179.20 REMARK 500 SER A 317 -57.77 176.99 REMARK 500 LEU A 318 -143.35 -65.27 REMARK 500 LEU A 320 -62.03 174.38 REMARK 500 GLU A 321 -80.73 -61.95 REMARK 500 HIS A 323 -161.23 -172.64 REMARK 500 HIS A 325 -43.69 -162.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 234 0.17 SIDE CHAIN REMARK 500 ARG A 263 0.27 SIDE CHAIN REMARK 500 ARG A 312 0.27 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 1DDF A 202 319 UNP P25445 TNR6_HUMAN 218 335 SEQRES 1 A 127 MET GLU THR VAL ALA ILE ASN LEU SER ASP VAL ASP LEU SEQRES 2 A 127 SER LYS TYR ILE THR THR ILE ALA GLY VAL MET THR LEU SEQRES 3 A 127 SER GLN VAL LYS GLY PHE VAL ARG LYS ASN GLY VAL ASN SEQRES 4 A 127 GLU ALA LYS ILE ASP GLU ILE LYS ASN ASP ASN VAL GLN SEQRES 5 A 127 ASP THR ALA GLU GLN LYS VAL GLN LEU LEU ARG ASN TRP SEQRES 6 A 127 HIS GLN LEU HIS GLY LYS LYS GLU ALA TYR ASP THR LEU SEQRES 7 A 127 ILE LYS ASP LEU LYS LYS ALA ASN LEU CYS THR LEU ALA SEQRES 8 A 127 GLU LYS ILE GLN THR ILE ILE LEU LYS ASP ILE THR SER SEQRES 9 A 127 ASP SER GLU ASN SER ASN PHE ARG ASN GLU ILE GLN SER SEQRES 10 A 127 LEU VAL LEU GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 TYR A 216 VAL A 223 1 8 HELIX 2 2 LEU A 226 ASN A 236 1 11 HELIX 3 3 GLU A 240 ASN A 250 1 11 HELIX 4 4 GLN A 257 LEU A 268 1 12 HELIX 5 5 ALA A 274 LYS A 284 1 11 HELIX 6 6 LEU A 290 ILE A 302 1 13 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000