PDB Short entry for 1DMY HEADER LYASE (OXO-ACID) 04-OCT-95 1DMY TITLE COMPLEX BETWEEN MURINE MITOCHONDRIAL CARBONIC ANYHDRASE V AND THE TITLE 2 TRANSITION STATE ANALOGUE ACETAZOLAMIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MURINE CARBONIC ANHYDRASE V; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CARBONATE DEHYDROGENASE, MCAVC; COMPND 5 EC: 4.2.1.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 STRAIN: BALB/CJ; SOURCE 6 CELL_LINE: BL21; SOURCE 7 ORGAN: LIVER; SOURCE 8 ORGANELLE: MITOCHONDRIA; SOURCE 9 GENE: MCA5C; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 12 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) PLYSS; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: PET31 T7; SOURCE 14 EXPRESSION_SYSTEM_GENE: MCA5C; SOURCE 15 OTHER_DETAILS: TRUNCATED VERSION OF PROTEIN WITH 21 N TERMINAL SOURCE 16 RESIDUES REMOVED (SEE HECK ET AL., JBC, VOL 269 (1994) PP 24742- SOURCE 17 24746) KEYWDS PROTON TRANSFER, LYASE (OXO-ACID) EXPDTA X-RAY DIFFRACTION AUTHOR P.A.BORIACK-SJODIN,D.W.CHRISTIANSON REVDAT 4 07-FEB-24 1DMY 1 REMARK SEQADV LINK REVDAT 3 24-FEB-09 1DMY 1 VERSN REVDAT 2 01-APR-03 1DMY 1 JRNL REVDAT 1 03-APR-96 1DMY 0 JRNL AUTH P.A.BORIACK-SJODIN,R.W.HECK,P.J.LAIPIS,D.N.SILVERMAN, JRNL AUTH 2 D.W.CHRISTIANSON JRNL TITL STRUCTURE DETERMINATION OF MURINE MITOCHONDRIAL CARBONIC JRNL TITL 2 ANHYDRASE V AT 2.45-A RESOLUTION: IMPLICATIONS FOR CATALYTIC JRNL TITL 3 PROTON TRANSFER AND INHIBITOR DESIGN. JRNL REF PROC.NATL.ACAD.SCI.USA V. 92 10949 1995 JRNL REFN ISSN 0027-8424 JRNL PMID 7479916 JRNL DOI 10.1073/PNAS.92.24.10949 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.W.HECK,S.M.TANHAUSER,R.MANDA,C.TU,P.J.LAIPIS,D.N.SILVERMAN REMARK 1 TITL CATALYTIC PROPERTIES OF MOUSE CARBONIC ANHYDRASE V REMARK 1 REF J.BIOL.CHEM. V. 269 24742 1994 REMARK 1 REFN ISSN 0021-9258 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 79.0 REMARK 3 NUMBER OF REFLECTIONS : 17382 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3810 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.800 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.05 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.348 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CRYST1 REMARK 3 TEXT TO EXPLAIN UNUSUAL UNIT-CELL DATA: TWO MOLECULES IN REMARK 3 UNIT CELL RELATED BY NONCRYSTALLOGRAPHIC SYMMETRY REMARK 3 SYMMETRY OPERATIONS FOR NON-STANDARD SETTING: REMARK 4 REMARK 4 1DMY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000172848. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-DEC-94 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : R-AXIS IIC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21645 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 19.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: MTRIX REMARK 300 THE TRANSFORMATIONS PRESENTED ON MTRIX RECORDS BELOW REMARK 300 DESCRIBE NON-CRYSTALLOGRAPHIC RELATIONSHIPS AMONG THE REMARK 300 VARIOUS DOMAINS IN THIS ENTRY. APPLYING THE APPROPRIATE REMARK 300 MTRIX TRANSFORMATION TO THE RESIDUES LISTED FIRST WILL REMARK 300 YIELD APPROXIMATE COORDINATES FOR THE RESIDUES LISTED REMARK 300 SECOND. REMARK 300 REMARK 300 APPLIED TO TRANSFORMED TO REMARK 300 MTRIX RESIDUES RESIDUES RMSD REMARK 300 M1 A 25 .. A 261 B 25 .. B 261 0.445 REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS A 22 REMARK 465 ALA A 23 REMARK 465 THR A 24 REMARK 465 LEU A 262 REMARK 465 ASP A 263 REMARK 465 ARG A 264 REMARK 465 THR A 265 REMARK 465 LYS A 266 REMARK 465 MET A 267 REMARK 465 ARG A 268 REMARK 465 SER A 269 REMARK 465 CYS B 22 REMARK 465 ALA B 23 REMARK 465 THR B 24 REMARK 465 LEU B 262 REMARK 465 ASP B 263 REMARK 465 ARG B 264 REMARK 465 THR B 265 REMARK 465 LYS B 266 REMARK 465 MET B 267 REMARK 465 ARG B 268 REMARK 465 SER B 269 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 261 O REMARK 470 ARG B 261 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 96 CG HIS A 96 CD2 0.062 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 230 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 LEU B 59 CA - CB - CG ANGL. DEV. = 16.7 DEGREES REMARK 500 LEU B 230 CA - CB - CG ANGL. DEV. = 14.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 27 58.89 -106.42 REMARK 500 ARG A 57 -68.08 -109.70 REMARK 500 ASP A 72 20.47 -75.91 REMARK 500 ASN A 86 -168.76 -170.48 REMARK 500 ASN A 244 44.51 -91.80 REMARK 500 ARG A 252 -137.34 65.89 REMARK 500 ARG B 57 -68.45 -127.41 REMARK 500 ASN B 244 47.70 -100.87 REMARK 500 ARG B 252 -124.97 71.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 280 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 94 NE2 REMARK 620 2 HIS A 96 NE2 116.4 REMARK 620 3 HIS A 119 ND1 106.8 95.7 REMARK 620 4 AZM A 400 N1 101.9 110.2 126.8 REMARK 620 5 AZM A 400 S1 89.0 140.4 105.9 31.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 280 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 94 NE2 REMARK 620 2 HIS B 96 NE2 115.9 REMARK 620 3 HIS B 119 ND1 108.0 100.6 REMARK 620 4 AZM B 900 N1 92.8 122.2 117.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: ZIN REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: CATALYTICALLY ACTIVE METAL ION REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 280 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 280 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AZM A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AZM B 900 DBREF 1DMY A 25 269 UNP P23589 CAH5A_MOUSE 55 299 DBREF 1DMY B 25 269 UNP P23589 CAH5A_MOUSE 55 299 SEQADV 1DMY MET A 185 UNP P23589 LEU 215 VARIANT SEQADV 1DMY MET A 225 UNP P23589 THR 255 VARIANT SEQADV 1DMY MET B 185 UNP P23589 LEU 215 VARIANT SEQADV 1DMY MET B 225 UNP P23589 THR 255 VARIANT SEQRES 1 A 248 CYS ALA THR GLY THR ARG GLN SER PRO ILE ASN ILE GLN SEQRES 2 A 248 TRP LYS ASP SER VAL TYR ASP PRO GLN LEU ALA PRO LEU SEQRES 3 A 248 ARG VAL SER TYR ASP ALA ALA SER CYS ARG TYR LEU TRP SEQRES 4 A 248 ASN THR GLY TYR PHE PHE GLN VAL GLU PHE ASP ASP SER SEQRES 5 A 248 CYS GLU ASP SER GLY ILE SER GLY GLY PRO LEU GLY ASN SEQRES 6 A 248 HIS TYR ARG LEU LYS GLN PHE HIS PHE HIS TRP GLY ALA SEQRES 7 A 248 THR ASP GLU TRP GLY SER GLU HIS ALA VAL ASP GLY HIS SEQRES 8 A 248 THR TYR PRO ALA GLU LEU HIS LEU VAL HIS TRP ASN SER SEQRES 9 A 248 THR LYS TYR GLU ASN TYR LYS LYS ALA SER VAL GLY GLU SEQRES 10 A 248 ASN GLY LEU ALA VAL ILE GLY VAL PHE LEU LYS LEU GLY SEQRES 11 A 248 ALA HIS HIS GLN ALA LEU GLN LYS LEU VAL ASP VAL LEU SEQRES 12 A 248 PRO GLU VAL ARG HIS LYS ASP THR GLN VAL ALA MET GLY SEQRES 13 A 248 PRO PHE ASP PRO SER CYS LEU MET PRO ALA CYS ARG ASP SEQRES 14 A 248 TYR TRP THR TYR PRO GLY SER LEU THR THR PRO PRO LEU SEQRES 15 A 248 ALA GLU SER VAL THR TRP ILE VAL GLN LYS THR PRO VAL SEQRES 16 A 248 GLU VAL SER PRO SER GLN LEU SER MET PHE ARG THR LEU SEQRES 17 A 248 LEU PHE SER GLY ARG GLY GLU GLU GLU ASP VAL MET VAL SEQRES 18 A 248 ASN ASN TYR ARG PRO LEU GLN PRO LEU ARG ASP ARG LYS SEQRES 19 A 248 LEU ARG SER SER PHE ARG LEU ASP ARG THR LYS MET ARG SEQRES 20 A 248 SER SEQRES 1 B 248 CYS ALA THR GLY THR ARG GLN SER PRO ILE ASN ILE GLN SEQRES 2 B 248 TRP LYS ASP SER VAL TYR ASP PRO GLN LEU ALA PRO LEU SEQRES 3 B 248 ARG VAL SER TYR ASP ALA ALA SER CYS ARG TYR LEU TRP SEQRES 4 B 248 ASN THR GLY TYR PHE PHE GLN VAL GLU PHE ASP ASP SER SEQRES 5 B 248 CYS GLU ASP SER GLY ILE SER GLY GLY PRO LEU GLY ASN SEQRES 6 B 248 HIS TYR ARG LEU LYS GLN PHE HIS PHE HIS TRP GLY ALA SEQRES 7 B 248 THR ASP GLU TRP GLY SER GLU HIS ALA VAL ASP GLY HIS SEQRES 8 B 248 THR TYR PRO ALA GLU LEU HIS LEU VAL HIS TRP ASN SER SEQRES 9 B 248 THR LYS TYR GLU ASN TYR LYS LYS ALA SER VAL GLY GLU SEQRES 10 B 248 ASN GLY LEU ALA VAL ILE GLY VAL PHE LEU LYS LEU GLY SEQRES 11 B 248 ALA HIS HIS GLN ALA LEU GLN LYS LEU VAL ASP VAL LEU SEQRES 12 B 248 PRO GLU VAL ARG HIS LYS ASP THR GLN VAL ALA MET GLY SEQRES 13 B 248 PRO PHE ASP PRO SER CYS LEU MET PRO ALA CYS ARG ASP SEQRES 14 B 248 TYR TRP THR TYR PRO GLY SER LEU THR THR PRO PRO LEU SEQRES 15 B 248 ALA GLU SER VAL THR TRP ILE VAL GLN LYS THR PRO VAL SEQRES 16 B 248 GLU VAL SER PRO SER GLN LEU SER MET PHE ARG THR LEU SEQRES 17 B 248 LEU PHE SER GLY ARG GLY GLU GLU GLU ASP VAL MET VAL SEQRES 18 B 248 ASN ASN TYR ARG PRO LEU GLN PRO LEU ARG ASP ARG LYS SEQRES 19 B 248 LEU ARG SER SER PHE ARG LEU ASP ARG THR LYS MET ARG SEQRES 20 B 248 SER HET ZN A 280 1 HET AZM A 400 13 HET ZN B 280 1 HET AZM B 900 13 HETNAM ZN ZINC ION HETNAM AZM 5-ACETAMIDO-1,3,4-THIADIAZOLE-2-SULFONAMIDE FORMUL 3 ZN 2(ZN 2+) FORMUL 4 AZM 2(C4 H6 N4 O3 S2) FORMUL 7 HOH *100(H2 O) HELIX 1 1 ALA A 53 SER A 55 5 3 HELIX 2 2 TYR A 131 VAL A 136 1 6 HELIX 3 3 GLN A 155 GLU A 166 1 12 HELIX 4 4 PRO A 181 LEU A 184 5 4 HELIX 5 5 PRO A 220 THR A 228 1 9 HELIX 6 6 TRP B 35 ASP B 37 5 3 HELIX 7 7 ALA B 53 SER B 55 5 3 HELIX 8 8 TYR B 131 VAL B 136 1 6 HELIX 9 9 GLN B 155 GLU B 166 1 12 HELIX 10 10 PRO B 181 LEU B 184 5 4 HELIX 11 11 PRO B 220 THR B 228 1 9 SHEET 1 A 2 SER A 38 TYR A 40 0 SHEET 2 A 2 LEU A 256 SER A 258 1 N LEU A 256 O VAL A 39 SHEET 1 B 2 ARG A 48 SER A 50 0 SHEET 2 B 2 GLY A 78 SER A 80 -1 N SER A 80 O ARG A 48 SHEET 1 C 8 GLN A 173 ALA A 175 0 SHEET 2 C 8 CYS A 56 ASN A 61 -1 N LEU A 59 O VAL A 174 SHEET 3 C 8 PHE A 66 PHE A 70 -1 N GLU A 69 O ARG A 57 SHEET 4 C 8 TYR A 88 TRP A 97 -1 N PHE A 93 O VAL A 68 SHEET 5 C 8 ALA A 116 ASN A 124 -1 N TRP A 123 O ARG A 89 SHEET 6 C 8 LEU A 141 LEU A 148 -1 N LEU A 148 O ALA A 116 SHEET 7 C 8 VAL A 207 GLN A 212 1 N THR A 208 O LEU A 141 SHEET 8 C 8 TYR A 191 GLY A 196 -1 N GLY A 196 O VAL A 207 SHEET 1 D 2 LEU A 148 LEU A 150 0 SHEET 2 D 2 VAL A 216 VAL A 218 1 N VAL A 216 O LYS A 149 SHEET 1 E 2 SER B 38 TYR B 40 0 SHEET 2 E 2 LEU B 256 SER B 258 1 N LEU B 256 O VAL B 39 SHEET 1 F 8 GLN B 173 ALA B 175 0 SHEET 2 F 8 CYS B 56 ASN B 61 -1 N LEU B 59 O VAL B 174 SHEET 3 F 8 PHE B 66 PHE B 70 -1 N GLU B 69 O ARG B 57 SHEET 4 F 8 TYR B 88 TRP B 97 -1 N PHE B 93 O VAL B 68 SHEET 5 F 8 ALA B 116 ASN B 124 -1 N TRP B 123 O ARG B 89 SHEET 6 F 8 LEU B 141 LEU B 148 -1 N LEU B 148 O ALA B 116 SHEET 7 F 8 VAL B 207 GLN B 212 1 N THR B 208 O LEU B 141 SHEET 8 F 8 TYR B 191 GLY B 196 -1 N GLY B 196 O VAL B 207 SHEET 1 G 2 LEU B 148 LEU B 150 0 SHEET 2 G 2 VAL B 216 VAL B 218 1 N VAL B 216 O LYS B 149 SHEET 1 H 2 ALA B 45 SER B 50 0 SHEET 2 H 2 GLY B 78 GLY B 82 -1 N GLY B 82 O ALA B 45 LINK NE2 HIS A 94 ZN ZN A 280 1555 1555 2.18 LINK NE2 HIS A 96 ZN ZN A 280 1555 1555 1.95 LINK ND1 HIS A 119 ZN ZN A 280 1555 1555 2.03 LINK ZN ZN A 280 N1 AZM A 400 1555 1555 1.92 LINK ZN ZN A 280 S1 AZM A 400 1555 1555 2.84 LINK NE2 HIS B 94 ZN ZN B 280 1555 1555 2.16 LINK NE2 HIS B 96 ZN ZN B 280 1555 1555 1.97 LINK ND1 HIS B 119 ZN ZN B 280 1555 1555 2.02 LINK ZN ZN B 280 N1 AZM B 900 1555 1555 1.76 CISPEP 1 SER A 29 PRO A 30 0 0.08 CISPEP 2 PRO A 201 PRO A 202 0 0.23 CISPEP 3 SER B 29 PRO B 30 0 0.15 CISPEP 4 PRO B 201 PRO B 202 0 0.40 SITE 1 ZIN 2 ZN A 280 ZN B 280 SITE 1 AC1 4 HIS A 94 HIS A 96 HIS A 119 AZM A 400 SITE 1 AC2 4 HIS B 94 HIS B 96 HIS B 119 AZM B 900 SITE 1 AC3 10 HIS A 94 HIS A 96 HIS A 119 TYR A 131 SITE 2 AC3 10 SER A 135 LEU A 198 THR A 199 THR A 200 SITE 3 AC3 10 TRP A 209 ZN A 280 SITE 1 AC4 10 HIS B 94 HIS B 96 HIS B 119 TYR B 131 SITE 2 AC4 10 SER B 135 LEU B 198 THR B 199 THR B 200 SITE 3 AC4 10 TRP B 209 ZN B 280 CRYST1 48.690 60.370 60.440 67.65 75.26 75.21 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020538 -0.005423 -0.003797 0.00000 SCALE2 0.000000 0.017132 -0.006137 0.00000 SCALE3 0.000000 0.000000 0.018173 0.00000 MTRIX1 1 -0.999912 0.003781 -0.012690 116.35023 1 MTRIX2 1 0.010869 -0.313023 -0.949683 108.07323 1 MTRIX3 1 -0.007563 -0.949738 0.312954 37.70745 1