PDB Short entry for 1F45 HEADER CYTOKINE/CYTOKINE 07-JUN-00 1F45 TITLE HUMAN INTERLEUKIN-12 CAVEAT 1F45 MAN C 3 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERLEUKIN-12 BETA CHAIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 23-328; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: INTERLEUKIN-12 ALPHA CHAIN; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: RESIDUES 23-219; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: CHO; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PEMC; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 16 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 18 EXPRESSION_SYSTEM_CELL_LINE: CHO; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PEMC KEYWDS INTERLEUKIN, CYTOKINE, CYTOKINE-CYTOKINE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.YOON,S.C.JOHNSTON,J.TANG,J.F.TOBIN,W.S.SOMERS REVDAT 6 10-NOV-21 1F45 1 SEQADV HETSYN REVDAT 5 29-JUL-20 1F45 1 CAVEAT COMPND REMARK HETNAM REVDAT 5 2 1 LINK SITE ATOM REVDAT 4 13-JUL-11 1F45 1 VERSN REVDAT 3 24-FEB-09 1F45 1 VERSN REVDAT 2 07-JAN-03 1F45 1 REMARK REVDAT 1 20-JUN-01 1F45 0 JRNL AUTH C.YOON,S.C.JOHNSTON,J.TANG,M.STAHL,J.F.TOBIN,W.S.SOMERS JRNL TITL CHARGED RESIDUES DOMINATE A UNIQUE INTERLOCKING TOPOGRAPHY JRNL TITL 2 IN THE HETERODIMERIC CYTOKINE INTERLEUKIN-12. JRNL REF EMBO J. V. 19 3530 2000 JRNL REFN ISSN 0261-4189 JRNL PMID 10899108 JRNL DOI 10.1093/EMBOJ/19.14.3530 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 12.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 21109 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1055 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3288 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 39 REMARK 3 SOLVENT ATOMS : 21 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.019 REMARK 3 BOND ANGLES (DEGREES) : 2.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1F45 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-JUN-00. REMARK 100 THE DEPOSITION ID IS D_1000011219. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-97 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21109 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 12.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 25.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.34800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% MPD, 650MM NACL, 100MM NA ACETATE, REMARK 280 PH 5.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.85000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.85000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 56.45000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 77.10000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 56.45000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 77.10000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 50.85000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 56.45000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 77.10000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 50.85000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 56.45000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 77.10000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 69 REMARK 465 LYS A 70 REMARK 465 GLY A 71 REMARK 465 GLY A 72 REMARK 465 GLU A 73 REMARK 465 VAL A 74 REMARK 465 LEU A 75 REMARK 465 ARG A 157 REMARK 465 VAL A 158 REMARK 465 ARG A 159 REMARK 465 GLY A 160 REMARK 465 ASP A 161 REMARK 465 ASN A 162 REMARK 465 LYS A 163 REMARK 465 GLY A 257 REMARK 465 LYS A 258 REMARK 465 SER A 259 REMARK 465 LYS A 260 REMARK 465 ARG A 261 REMARK 465 GLU A 262 REMARK 465 LYS A 263 REMARK 465 LYS A 280 REMARK 465 ASN A 281 REMARK 465 ALA A 282 REMARK 465 ARG B 1 REMARK 465 ASN B 2 REMARK 465 LEU B 3 REMARK 465 PRO B 4 REMARK 465 VAL B 5 REMARK 465 ALA B 6 REMARK 465 THR B 7 REMARK 465 PRO B 8 REMARK 465 ASP B 9 REMARK 465 PRO B 10 REMARK 465 GLY B 11 REMARK 465 MET B 12 REMARK 465 PHE B 13 REMARK 465 PRO B 14 REMARK 465 CYS B 15 REMARK 465 LEU B 16 REMARK 465 HIS B 17 REMARK 465 HIS B 18 REMARK 465 SER B 19 REMARK 465 THR B 43 REMARK 465 SER B 44 REMARK 465 GLU B 45 REMARK 465 GLU B 46 REMARK 465 ILE B 47 REMARK 465 ASP B 48 REMARK 465 HIS B 49 REMARK 465 GLU B 50 REMARK 465 ASP B 51 REMARK 465 ILE B 52 REMARK 465 THR B 53 REMARK 465 LYS B 54 REMARK 465 ASP B 55 REMARK 465 LYS B 56 REMARK 465 THR B 57 REMARK 465 LEU B 74A REMARK 465 ASN B 74B REMARK 465 SER B 74C REMARK 465 ARG B 74D REMARK 465 GLU B 74E REMARK 465 CYS B 88 REMARK 465 LEU B 89 REMARK 465 ALA B 90 REMARK 465 SER B 91 REMARK 465 ARG B 92 REMARK 465 LYS B 93 REMARK 465 THR B 94 REMARK 465 ASN B 149 REMARK 465 PHE B 150 REMARK 465 ASN B 151 REMARK 465 SER B 152 REMARK 465 GLU B 153 REMARK 465 THR B 154 REMARK 465 VAL B 155 REMARK 465 PRO B 156 REMARK 465 GLN B 157 REMARK 465 LYS B 158 REMARK 465 SER B 159 REMARK 465 SER B 160 REMARK 465 LEU B 161 REMARK 465 GLU B 162 REMARK 465 GLU B 163 REMARK 465 PRO B 164 REMARK 465 ASP B 165 REMARK 465 PHE B 166 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 33 CG CD OE1 OE2 REMARK 470 LYS A 99 CG CD CE NZ REMARK 470 GLU A 100 CG CD OE1 OE2 REMARK 470 LYS A 102 CG CD CE NZ REMARK 470 LYS A 135 CG CD CE NZ REMARK 470 ARG A 279 CG CD NE CZ NH1 NH2 REMARK 470 SER B 86 CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 41 C - N - CA ANGL. DEV. = 14.8 DEGREES REMARK 500 CYS B 42 CA - CB - SG ANGL. DEV. = 8.9 DEGREES REMARK 500 ARG B 183 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 4 -112.10 -85.32 REMARK 500 ASP A 29 86.50 -67.80 REMARK 500 THR A 30 68.13 -175.91 REMARK 500 PRO A 31 69.37 -39.96 REMARK 500 GLU A 33 -77.94 47.02 REMARK 500 ASP A 34 160.95 3.87 REMARK 500 ASP A 41 -130.13 45.21 REMARK 500 GLN A 42 -9.24 -56.07 REMARK 500 VAL A 46 80.63 -69.18 REMARK 500 LYS A 51 -53.43 -128.22 REMARK 500 LYS A 58 -14.68 -175.24 REMARK 500 SER A 78 104.20 174.77 REMARK 500 GLN A 98 7.18 -58.76 REMARK 500 LYS A 99 -88.18 39.26 REMARK 500 GLU A 100 -61.43 9.19 REMARK 500 LYS A 102 19.68 -171.95 REMARK 500 ASN A 103 124.40 62.74 REMARK 500 LYS A 104 37.39 78.31 REMARK 500 ASN A 113 -172.89 -179.17 REMARK 500 THR A 128 -149.67 -71.12 REMARK 500 SER A 140 -68.08 -124.56 REMARK 500 SER A 141 73.41 -64.85 REMARK 500 ASP A 142 69.69 101.33 REMARK 500 ALA A 151 148.16 -32.85 REMARK 500 ASP A 174 -73.97 -69.53 REMARK 500 SER A 175 71.89 -103.43 REMARK 500 LYS A 195 -128.80 76.66 REMARK 500 ASP A 214 171.08 -59.20 REMARK 500 ASN A 218 72.91 41.38 REMARK 500 LYS A 222 61.86 -156.98 REMARK 500 PRO A 223 153.28 -49.73 REMARK 500 SER A 227 134.09 165.32 REMARK 500 ASP A 265 70.11 61.01 REMARK 500 TYR A 293 -102.38 -120.65 REMARK 500 PRO B 41 -120.36 -27.19 REMARK 500 GLU B 72 -68.70 -24.40 REMARK 500 SER B 73 20.83 -70.65 REMARK 500 ASN B 84 -15.53 -44.82 REMARK 500 LYS B 122 -70.88 -50.81 REMARK 500 LEU B 123 -26.66 -35.51 REMARK 500 PRO B 127 -18.63 -44.08 REMARK 500 LYS B 128 5.71 -69.80 REMARK 500 ARG B 129 -139.70 50.42 REMARK 500 ILE B 131 -123.05 -138.75 REMARK 500 PHE B 132 -35.96 -146.77 REMARK 500 ASN B 195 -85.74 -88.94 REMARK 500 ALA B 196 -123.15 47.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 246 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1F42 RELATED DB: PDB REMARK 900 1F42 CONTAINS INTERLEUKIN-12 BETA CHAIN DBREF 1F45 A 1 306 UNP P29460 I12B_HUMAN 23 328 DBREF 1F45 B 1 197 UNP P29459 I12A_HUMAN 23 219 SEQADV 1F45 MET B 191 UNP P29459 THR 213 ENGINEERED MUTATION SEQRES 1 A 306 ILE TRP GLU LEU LYS LYS ASP VAL TYR VAL VAL GLU LEU SEQRES 2 A 306 ASP TRP TYR PRO ASP ALA PRO GLY GLU MET VAL VAL LEU SEQRES 3 A 306 THR CYS ASP THR PRO GLU GLU ASP GLY ILE THR TRP THR SEQRES 4 A 306 LEU ASP GLN SER SER GLU VAL LEU GLY SER GLY LYS THR SEQRES 5 A 306 LEU THR ILE GLN VAL LYS GLU PHE GLY ASP ALA GLY GLN SEQRES 6 A 306 TYR THR CYS HIS LYS GLY GLY GLU VAL LEU SER HIS SER SEQRES 7 A 306 LEU LEU LEU LEU HIS LYS LYS GLU ASP GLY ILE TRP SER SEQRES 8 A 306 THR ASP ILE LEU LYS ASP GLN LYS GLU PRO LYS ASN LYS SEQRES 9 A 306 THR PHE LEU ARG CYS GLU ALA LYS ASN TYR SER GLY ARG SEQRES 10 A 306 PHE THR CYS TRP TRP LEU THR THR ILE SER THR ASP LEU SEQRES 11 A 306 THR PHE SER VAL LYS SER SER ARG GLY SER SER ASP PRO SEQRES 12 A 306 GLN GLY VAL THR CYS GLY ALA ALA THR LEU SER ALA GLU SEQRES 13 A 306 ARG VAL ARG GLY ASP ASN LYS GLU TYR GLU TYR SER VAL SEQRES 14 A 306 GLU CYS GLN GLU ASP SER ALA CYS PRO ALA ALA GLU GLU SEQRES 15 A 306 SER LEU PRO ILE GLU VAL MET VAL ASP ALA VAL HIS LYS SEQRES 16 A 306 LEU LYS TYR GLU ASN TYR THR SER SER PHE PHE ILE ARG SEQRES 17 A 306 ASP ILE ILE LYS PRO ASP PRO PRO LYS ASN LEU GLN LEU SEQRES 18 A 306 LYS PRO LEU LYS ASN SER ARG GLN VAL GLU VAL SER TRP SEQRES 19 A 306 GLU TYR PRO ASP THR TRP SER THR PRO HIS SER TYR PHE SEQRES 20 A 306 SER LEU THR PHE CYS VAL GLN VAL GLN GLY LYS SER LYS SEQRES 21 A 306 ARG GLU LYS LYS ASP ARG VAL PHE THR ASP LYS THR SER SEQRES 22 A 306 ALA THR VAL ILE CYS ARG LYS ASN ALA SER ILE SER VAL SEQRES 23 A 306 ARG ALA GLN ASP ARG TYR TYR SER SER SER TRP SER GLU SEQRES 24 A 306 TRP ALA SER VAL PRO CYS SER SEQRES 1 B 197 ARG ASN LEU PRO VAL ALA THR PRO ASP PRO GLY MET PHE SEQRES 2 B 197 PRO CYS LEU HIS HIS SER GLN ASN LEU LEU ARG ALA VAL SEQRES 3 B 197 SER ASN MET LEU GLN LYS ALA ARG GLN THR LEU GLU PHE SEQRES 4 B 197 TYR PRO CYS THR SER GLU GLU ILE ASP HIS GLU ASP ILE SEQRES 5 B 197 THR LYS ASP LYS THR SER THR VAL GLU ALA CYS LEU PRO SEQRES 6 B 197 LEU GLU LEU THR LYS ASN GLU SER CYS LEU ASN SER ARG SEQRES 7 B 197 GLU THR SER PHE ILE THR ASN GLY SER CYS LEU ALA SER SEQRES 8 B 197 ARG LYS THR SER PHE MET MET ALA LEU CYS LEU SER SER SEQRES 9 B 197 ILE TYR GLU ASP LEU LYS MET TYR GLN VAL GLU PHE LYS SEQRES 10 B 197 THR MET ASN ALA LYS LEU LEU MET ASP PRO LYS ARG GLN SEQRES 11 B 197 ILE PHE LEU ASP GLN ASN MET LEU ALA VAL ILE ASP GLU SEQRES 12 B 197 LEU MET GLN ALA LEU ASN PHE ASN SER GLU THR VAL PRO SEQRES 13 B 197 GLN LYS SER SER LEU GLU GLU PRO ASP PHE TYR LYS THR SEQRES 14 B 197 LYS ILE LYS LEU CYS ILE LEU LEU HIS ALA PHE ARG ILE SEQRES 15 B 197 ARG ALA VAL THR ILE ASP ARG VAL MET SER TYR LEU ASN SEQRES 16 B 197 ALA SER MODRES 1F45 ASN A 200 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET MAN C 3 11 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 3 MAN C6 H12 O6 FORMUL 4 HOH *21(H2 O) HELIX 1 1 GLU A 59 ALA A 63 5 5 HELIX 2 2 PHE A 206 ILE A 210 5 5 HELIX 3 3 GLN B 20 LEU B 37 1 18 HELIX 4 4 GLU B 38 TYR B 40 5 3 HELIX 5 5 SER B 58 CYS B 63 1 6 HELIX 6 6 LEU B 66 ASN B 71 5 6 HELIX 7 7 SER B 95 LEU B 124 1 30 HELIX 8 8 PHE B 132 LEU B 148 1 17 HELIX 9 9 TYR B 167 ALA B 196 1 30 SHEET 1 A 4 TRP A 2 GLU A 3 0 SHEET 2 A 4 VAL A 8 ASP A 14 -1 N VAL A 10 O TRP A 2 SHEET 3 A 4 LEU A 79 GLU A 86 1 O LEU A 79 N TYR A 9 SHEET 4 A 4 ILE A 89 TRP A 90 -1 O ILE A 89 N GLU A 86 SHEET 1 B 2 GLU A 22 VAL A 24 0 SHEET 2 B 2 ILE A 55 VAL A 57 -1 N ILE A 55 O VAL A 24 SHEET 1 C 3 GLY A 48 SER A 49 0 SHEET 2 C 3 THR A 37 LEU A 40 -1 O TRP A 38 N GLY A 48 SHEET 3 C 3 TYR A 66 THR A 67 -1 N THR A 67 O THR A 39 SHEET 1 D 4 ARG A 108 GLU A 110 0 SHEET 2 D 4 ARG A 117 THR A 124 -1 O THR A 119 N GLU A 110 SHEET 3 D 4 TYR A 165 GLU A 173 -1 N TYR A 165 O THR A 124 SHEET 4 D 4 VAL A 146 CYS A 148 -1 N THR A 147 O GLN A 172 SHEET 1 E 4 ARG A 108 GLU A 110 0 SHEET 2 E 4 ARG A 117 THR A 124 -1 O THR A 119 N GLU A 110 SHEET 3 E 4 TYR A 165 GLU A 173 -1 N TYR A 165 O THR A 124 SHEET 4 E 4 THR A 152 ALA A 155 -1 O THR A 152 N SER A 168 SHEET 1 F 3 THR A 131 ARG A 138 0 SHEET 2 F 3 ILE A 186 HIS A 194 -1 N GLU A 187 O SER A 137 SHEET 3 F 3 LYS A 197 PHE A 205 -1 N LYS A 197 O HIS A 194 SHEET 1 G 3 LYS A 217 GLN A 220 0 SHEET 2 G 3 GLN A 229 GLU A 235 -1 N SER A 233 O GLN A 220 SHEET 3 G 3 SER A 273 ILE A 277 -1 N ALA A 274 O VAL A 232 SHEET 1 H 4 ARG A 266 THR A 269 0 SHEET 2 H 4 LEU A 249 VAL A 255 -1 N PHE A 251 O THR A 269 SHEET 3 H 4 ILE A 284 ASP A 290 -1 N SER A 285 O GLN A 254 SHEET 4 H 4 ALA A 301 VAL A 303 -1 O ALA A 301 N VAL A 286 SSBOND 1 CYS A 28 CYS A 68 1555 1555 2.04 SSBOND 2 CYS A 109 CYS A 120 1555 1555 2.04 SSBOND 3 CYS A 148 CYS A 171 1555 1555 2.04 SSBOND 4 CYS A 177 CYS B 74 1555 1555 2.06 SSBOND 5 CYS A 278 CYS A 305 1555 1555 2.04 SSBOND 6 CYS B 42 CYS B 174 1555 1555 2.07 SSBOND 7 CYS B 63 CYS B 101 1555 1555 2.05 LINK ND2 ASN A 200 C1 NAG C 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.38 LINK O4 NAG C 2 C1 MAN C 3 1555 1555 1.41 CISPEP 1 THR A 242 PRO A 243 0 -0.25 CRYST1 112.900 154.200 101.700 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008857 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006485 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009833 0.00000