PDB Short entry for 1FBI HEADER COMPLEX (ANTIBODY/ANTIGEN) 19-JAN-95 1FBI TITLE CRYSTAL STRUCTURE OF A CROSS-REACTION COMPLEX BETWEEN FAB TITLE 2 F9.13.7 AND GUINEA-FOWL LYSOZYME COMPND MOL_ID: 1; COMPND 2 MOLECULE: IGG1 F9.13.7 FAB (LIGHT CHAIN); COMPND 3 CHAIN: L, P; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: IGG1 F9.13.7 FAB (HEAVY CHAIN); COMPND 7 CHAIN: H, Q; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: GUINEA FOWL LYSOZYME; COMPND 11 CHAIN: X, Y; COMPND 12 EC: 3.2.1.17; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 7 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 8 ORGANISM_TAXID: 10090; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: NUMIDA MELEAGRIS; SOURCE 11 ORGANISM_COMMON: HELMETED GUINEAFOWL; SOURCE 12 ORGANISM_TAXID: 8996 KEYWDS COMPLEX (ANTIBODY/ANTIGEN) EXPDTA X-RAY DIFFRACTION AUTHOR J.LESCAR,P.M.ALZARI REVDAT 2 24-FEB-09 1FBI 1 VERSN REVDAT 1 27-FEB-95 1FBI 0 JRNL AUTH J.LESCAR,M.PELLEGRINI,H.SOUCHON,D.TELLO,R.J.POLJAK, JRNL AUTH 2 N.PETERSON,M.GREENE,P.M.ALZARI JRNL TITL CRYSTAL STRUCTURE OF A CROSS-REACTION COMPLEX JRNL TITL 2 BETWEEN FAB F9.13.7 AND GUINEA FOWL LYSOZYME. JRNL REF J.BIOL.CHEM. V. 270 18067 1995 JRNL REFN ISSN 0021-9258 JRNL PMID 7629116 JRNL DOI 10.1074/JBC.270.30.18067 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.LESCAR,H.SOUCHON,P.ALZARI REMARK 1 TITL CRYSTAL STRUCTURES OF PHEASANT AND GUINEA-FOWL REMARK 1 TITL 2 EGG-WHITE LYSOZYMES REMARK 1 REF PROTEIN SCI. V. 3 788 1994 REMARK 1 REFN ISSN 0961-8368 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.LESCAR,M.-M.RIOTTOT,H.SOUCHON,V.CHITARRA, REMARK 1 AUTH 2 G.BENTLEY,J.NAVAZA,P.ALZARI,R.POLJAK REMARK 1 TITL CRYSTALLIZATION, PRELIMINARY X-RAY DIFFRACTION REMARK 1 TITL 2 STUDY, AND CRYSTAL PACKING OF A COMPLEX BETWEEN REMARK 1 TITL 3 ANTI-HEN LYSOZYME ANTIBODY AND GUINEA-FOWL LYSOZYME REMARK 1 REF PROTEINS V. 15 209 1993 REMARK 1 REFN ISSN 0887-3585 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 7.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 23703 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8521 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.65 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1FBI COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28224 REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 97.75000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: P, Q, Y REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP L 17 CG OD1 OD2 REMARK 470 ARG L 18 CG CD NE CZ NH1 NH2 REMARK 470 ARG L 76 CG CD NE CZ NH1 NH2 REMARK 470 GLN L 80 CG CD OE1 NE2 REMARK 470 ARG L 108 CG CD NE CZ NH1 NH2 REMARK 470 GLU L 154 CG CD OE1 OE2 REMARK 470 GLU L 213 CG CD OE1 OE2 REMARK 470 GLN H 1 CG CD OE1 NE2 REMARK 470 VAL H 2 CG1 CG2 REMARK 470 GLN H 3 CG CD OE1 NE2 REMARK 470 LYS H 13 CG CD CE NZ REMARK 470 LYS H 74 CG CD CE NZ REMARK 470 SER H 76 OG REMARK 470 GLU H 89 CG CD OE1 OE2 REMARK 470 TYR H 111 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS H 124 CG CD CE NZ REMARK 470 ASN H 142 CG OD1 ND2 REMARK 470 ASP H 182 CG OD1 OD2 REMARK 470 LYS P 45 CG CD CE NZ REMARK 470 ARG P 76 CG CD NE CZ NH1 NH2 REMARK 470 LYS P 107 CG CD CE NZ REMARK 470 ARG P 108 CG CD NE CZ NH1 NH2 REMARK 470 GLN P 124 CG CD OE1 NE2 REMARK 470 ARG P 188 CG CD NE CZ NH1 NH2 REMARK 470 GLN Q 3 CG CD OE1 NE2 REMARK 470 GLN Q 5 CG CD OE1 NE2 REMARK 470 GLU Q 10 CG CD OE1 OE2 REMARK 470 GLN Q 43 CG CD OE1 NE2 REMARK 470 LYS Q 74 CG CD CE NZ REMARK 470 SER Q 75 OG REMARK 470 SER Q 76 OG REMARK 470 SER Q 85 OG REMARK 470 GLU Q 89 CG CD OE1 OE2 REMARK 470 ASP Q 90 CG OD1 OD2 REMARK 470 SER Q 121 OG REMARK 470 SER Q 122 OG REMARK 470 LYS Q 124 CG CD CE NZ REMARK 470 ASP Q 182 CG OD1 OD2 REMARK 470 ARG Q 197 CG CD NE CZ NH1 NH2 REMARK 470 HIS Q 208 CG ND1 CD2 CE1 NE2 REMARK 470 LYS Y 125 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU L 15 77.02 -53.05 REMARK 500 CYS L 23 119.42 -167.42 REMARK 500 SER L 30 73.03 29.30 REMARK 500 ASN L 31 13.12 56.90 REMARK 500 THR L 51 -47.41 74.53 REMARK 500 SER L 67 110.58 165.91 REMARK 500 SER L 72 142.17 -179.29 REMARK 500 GLN L 80 -85.79 -53.49 REMARK 500 THR L 93 169.22 177.92 REMARK 500 ASP L 110 177.88 -43.31 REMARK 500 SER L 116 93.21 -178.58 REMARK 500 ALA L 130 84.33 -151.23 REMARK 500 TYR L 140 129.36 -171.25 REMARK 500 ASP L 143 90.26 -65.44 REMARK 500 GLN L 156 -46.00 -137.21 REMARK 500 ASN L 157 66.56 -65.12 REMARK 500 SER L 162 113.94 -179.91 REMARK 500 ASP L 165 140.18 -38.37 REMARK 500 GLN L 166 122.50 -31.58 REMARK 500 LYS L 169 -35.58 -177.19 REMARK 500 ASP L 170 -76.27 -138.44 REMARK 500 SER L 171 -84.02 167.84 REMARK 500 THR L 172 -169.96 26.43 REMARK 500 THR L 178 138.67 -26.56 REMARK 500 ARG L 188 -6.17 -177.10 REMARK 500 SER L 191 81.94 54.16 REMARK 500 HIS L 198 95.10 -168.59 REMARK 500 LYS L 199 -60.93 7.08 REMARK 500 VAL H 2 98.09 68.15 REMARK 500 GLU H 10 102.37 -164.74 REMARK 500 SER H 25 139.14 -174.47 REMARK 500 LYS H 65 86.21 -55.83 REMARK 500 SER H 85 62.97 32.57 REMARK 500 SER H 88 -67.74 -29.96 REMARK 500 ALA H 92 -165.63 -178.82 REMARK 500 TYR H 100 -79.15 -120.16 REMARK 500 THR H 104 -34.19 -34.63 REMARK 500 TYR H 111 78.99 54.50 REMARK 500 ALA H 138 -175.41 -54.14 REMARK 500 ALA H 139 98.25 77.46 REMARK 500 GLN H 140 83.32 -50.10 REMARK 500 THR H 141 111.95 -22.77 REMARK 500 VAL H 151 95.72 -61.40 REMARK 500 PHE H 155 129.26 -176.02 REMARK 500 SER H 169 81.29 -29.10 REMARK 500 SER H 170 36.00 -163.81 REMARK 500 ALA H 177 78.51 -63.01 REMARK 500 ASP H 182 -3.11 77.09 REMARK 500 SER H 187 153.71 179.95 REMARK 500 PRO H 198 -8.19 -59.85 REMARK 500 SER H 199 -81.60 -44.36 REMARK 500 THR H 201 140.24 62.97 REMARK 500 HIS H 208 75.65 -119.06 REMARK 500 PRO H 209 107.28 -58.82 REMARK 500 ALA H 210 -64.85 156.34 REMARK 500 ARG X 5 -52.93 -25.50 REMARK 500 ASN X 19 -3.77 63.48 REMARK 500 ARG X 21 17.66 59.89 REMARK 500 LEU X 25 -47.72 -29.97 REMARK 500 LYS X 33 -74.65 -60.35 REMARK 500 PHE X 34 0.86 -66.40 REMARK 500 ASN X 44 103.18 -163.17 REMARK 500 ASP X 48 33.85 173.00 REMARK 500 ARG X 61 -90.23 -77.04 REMARK 500 TRP X 62 -78.11 -51.90 REMARK 500 ARG X 68 8.88 -62.31 REMARK 500 ASN X 74 60.18 31.80 REMARK 500 SER X 81 -38.46 -38.54 REMARK 500 GLN X 84 72.29 -117.47 REMARK 500 ASN X 106 1.71 -64.40 REMARK 500 LYS X 116 108.02 -53.22 REMARK 500 LYS X 125 100.90 -59.40 REMARK 500 ASN P 31 -7.97 65.75 REMARK 500 PRO P 40 79.05 -56.27 REMARK 500 ASP P 41 -2.28 -167.95 REMARK 500 THR P 51 -45.94 78.74 REMARK 500 SER P 60 -4.80 -57.22 REMARK 500 LYS P 107 96.47 -68.50 REMARK 500 SER P 116 102.39 -165.16 REMARK 500 ALA P 130 77.86 -168.99 REMARK 500 ASN P 138 90.70 33.99 REMARK 500 ASP P 143 109.92 -58.69 REMARK 500 ASP P 151 56.85 -176.71 REMARK 500 ASN P 157 -97.25 -113.09 REMARK 500 ASP P 165 -101.07 -67.21 REMARK 500 SER P 177 65.55 -154.88 REMARK 500 GLU P 185 -26.68 169.94 REMARK 500 TYR P 186 -156.35 -74.47 REMARK 500 GLU P 187 -48.31 75.74 REMARK 500 HIS P 189 -170.66 57.85 REMARK 500 TYR P 192 106.31 -59.20 REMARK 500 THR P 200 -95.50 88.36 REMARK 500 SER P 201 -36.08 -36.24 REMARK 500 THR P 202 -49.88 76.52 REMARK 500 ARG P 211 -69.61 -125.54 REMARK 500 ASN P 212 24.28 -73.32 REMARK 500 GLU P 213 144.13 -174.15 REMARK 500 PRO Q 7 -132.67 -68.63 REMARK 500 GLU Q 10 119.62 -166.34 REMARK 500 TYR Q 27 166.12 175.69 REMARK 500 THR Q 30 -23.97 -178.05 REMARK 500 ASP Q 55 12.92 -147.58 REMARK 500 ASN Q 59 75.19 -160.85 REMARK 500 PHE Q 64 46.14 -82.14 REMARK 500 LYS Q 65 -92.75 -49.77 REMARK 500 ALA Q 92 -172.27 -175.52 REMARK 500 TYR Q 100 -89.41 -129.39 REMARK 500 TYR Q 111 83.69 52.59 REMARK 500 GLN Q 114 -77.69 16.47 REMARK 500 THR Q 125 103.62 -55.82 REMARK 500 PRO Q 135 -119.01 -70.18 REMARK 500 SER Q 137 -96.46 39.65 REMARK 500 ALA Q 138 45.40 -77.17 REMARK 500 ASN Q 142 -125.02 -148.50 REMARK 500 PHE Q 155 140.81 -171.32 REMARK 500 PRO Q 156 -101.30 -75.34 REMARK 500 PRO Q 158 -161.35 -79.36 REMARK 500 SER Q 170 149.97 175.31 REMARK 500 SER Q 199 -82.56 -59.56 REMARK 500 CYS Y 6 -45.16 76.65 REMARK 500 ASP Y 18 -85.33 -6.80 REMARK 500 LEU Y 25 -36.89 -35.09 REMARK 500 PHE Y 34 7.05 -68.94 REMARK 500 PHE Y 38 -6.52 72.42 REMARK 500 GLN Y 41 5.04 -166.32 REMARK 500 ASP Y 48 0.37 -61.72 REMARK 500 VAL Y 55 -3.52 -59.72 REMARK 500 ARG Y 61 -23.24 -170.05 REMARK 500 ASN Y 74 54.40 39.65 REMARK 500 ASN Y 77 76.63 47.27 REMARK 500 ILE Y 78 141.71 -176.70 REMARK 500 GLN Y 84 74.45 -111.88 REMARK 500 SER Y 86 -80.91 -54.46 REMARK 500 ASP Y 87 107.35 -42.28 REMARK 500 ASN Y 103 6.72 -57.29 REMARK 500 ALA Y 107 -5.89 -57.95 REMARK 500 VAL Y 109 -80.83 45.06 REMARK 500 TRP Y 111 -51.69 -172.01 REMARK 500 HIS Y 114 -12.86 84.24 REMARK 500 CYS Y 115 -17.62 -148.18 REMARK 500 ARG Y 128 75.74 69.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR P 50 0.07 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 1FBI H 123 221 UNP P01868 GC1_MOUSE 1 99 DBREF 1FBI X 1 129 UNP P00704 LYSC_NUMME 1 129 DBREF 1FBI Q 123 221 UNP P01868 GC1_MOUSE 1 99 DBREF 1FBI Y 1 129 UNP P00704 LYSC_NUMME 1 129 DBREF 1FBI L 1 214 PDB 1FBI 1FBI 1 214 DBREF 1FBI P 1 214 PDB 1FBI 1FBI 1 214 SEQRES 1 L 214 ASP ILE GLN MET THR GLN THR THR SER SER LEU SER ALA SEQRES 2 L 214 SER LEU GLY ASP ARG VAL THR ILE SER CYS ARG ALA SER SEQRES 3 L 214 GLN ASP ILE SER ASN TYR LEU ASN TRP TYR GLN LYS LYS SEQRES 4 L 214 PRO ASP GLY THR VAL LYS LEU LEU ILE TYR TYR THR SER SEQRES 5 L 214 ARG LEU HIS SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR ASP TYR SER LEU THR ILE ARG ASN LEU SEQRES 7 L 214 GLU GLN GLU ASP ILE ALA THR TYR PHE CYS GLN GLN GLY SEQRES 8 L 214 TYR THR LEU PRO TYR THR PHE GLY GLY GLY THR LYS LEU SEQRES 9 L 214 GLU ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 L 214 PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SEQRES 11 L 214 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP SEQRES 12 L 214 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN SEQRES 13 L 214 ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR SEQRES 15 L 214 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU SEQRES 16 L 214 ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER SEQRES 17 L 214 PHE ASN ARG ASN GLU CYS SEQRES 1 H 221 GLN VAL GLN LEU GLN GLN PRO GLY ALA GLU LEU VAL LYS SEQRES 2 H 221 PRO GLY ALA SER VAL LYS LEU SER CYS LYS ALA SER GLY SEQRES 3 H 221 TYR THR PHE THR SER TYR TRP MET HIS TRP VAL LYS GLN SEQRES 4 H 221 GLY PRO GLY GLN GLY LEU GLU TRP ILE GLY GLU ILE ASP SEQRES 5 H 221 PRO SER ASP SER TYR PRO ASN TYR ASN GLU LYS PHE LYS SEQRES 6 H 221 GLY LYS ALA THR LEU THR VAL ASP LYS SER SER SER THR SEQRES 7 H 221 ALA TYR MET GLN LEU SER SER LEU THR SER GLU ASP SER SEQRES 8 H 221 ALA VAL TYR TYR CYS ALA SER LEU TYR TYR TYR GLY THR SEQRES 9 H 221 SER TYR GLY VAL LEU ASP TYR TRP GLY GLN GLY THR SER SEQRES 10 H 221 VAL THR VAL SER SER ALA LYS THR THR PRO PRO SER VAL SEQRES 11 H 221 TYR PRO LEU ALA PRO GLY SER ALA ALA GLN THR ASN SER SEQRES 12 H 221 MET VAL THR LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO SEQRES 13 H 221 GLU PRO VAL THR VAL THR TRP ASN SER GLY SER LEU SER SEQRES 14 H 221 SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER ASP SEQRES 15 H 221 LEU TYR THR LEU SER SER SER VAL THR VAL PRO SER SER SEQRES 16 H 221 PRO ARG PRO SER GLU THR VAL THR CYS ASN VAL ALA HIS SEQRES 17 H 221 PRO ALA SER SER THR LYS VAL ASP LYS LYS ILE VAL PRO SEQRES 1 X 129 LYS VAL PHE GLY ARG CYS GLU LEU ALA ALA ALA MET LYS SEQRES 2 X 129 ARG HIS GLY LEU ASP ASN TYR ARG GLY TYR SER LEU GLY SEQRES 3 X 129 ASN TRP VAL CYS ALA ALA LYS PHE GLU SER ASN PHE ASN SEQRES 4 X 129 SER GLN ALA THR ASN ARG ASN THR ASP GLY SER THR ASP SEQRES 5 X 129 TYR GLY VAL LEU GLN ILE ASN SER ARG TRP TRP CYS ASN SEQRES 6 X 129 ASP GLY ARG THR PRO GLY SER ARG ASN LEU CYS ASN ILE SEQRES 7 X 129 PRO CYS SER ALA LEU GLN SER SER ASP ILE THR ALA THR SEQRES 8 X 129 ALA ASN CYS ALA LYS LYS ILE VAL SER ASP GLY ASN GLY SEQRES 9 X 129 MET ASN ALA TRP VAL ALA TRP ARG LYS HIS CYS LYS GLY SEQRES 10 X 129 THR ASP VAL ARG VAL TRP ILE LYS GLY CYS ARG LEU SEQRES 1 P 214 ASP ILE GLN MET THR GLN THR THR SER SER LEU SER ALA SEQRES 2 P 214 SER LEU GLY ASP ARG VAL THR ILE SER CYS ARG ALA SER SEQRES 3 P 214 GLN ASP ILE SER ASN TYR LEU ASN TRP TYR GLN LYS LYS SEQRES 4 P 214 PRO ASP GLY THR VAL LYS LEU LEU ILE TYR TYR THR SER SEQRES 5 P 214 ARG LEU HIS SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 P 214 GLY SER GLY THR ASP TYR SER LEU THR ILE ARG ASN LEU SEQRES 7 P 214 GLU GLN GLU ASP ILE ALA THR TYR PHE CYS GLN GLN GLY SEQRES 8 P 214 TYR THR LEU PRO TYR THR PHE GLY GLY GLY THR LYS LEU SEQRES 9 P 214 GLU ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 P 214 PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SEQRES 11 P 214 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP SEQRES 12 P 214 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN SEQRES 13 P 214 ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS SEQRES 14 P 214 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR SEQRES 15 P 214 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU SEQRES 16 P 214 ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER SEQRES 17 P 214 PHE ASN ARG ASN GLU CYS SEQRES 1 Q 221 GLN VAL GLN LEU GLN GLN PRO GLY ALA GLU LEU VAL LYS SEQRES 2 Q 221 PRO GLY ALA SER VAL LYS LEU SER CYS LYS ALA SER GLY SEQRES 3 Q 221 TYR THR PHE THR SER TYR TRP MET HIS TRP VAL LYS GLN SEQRES 4 Q 221 GLY PRO GLY GLN GLY LEU GLU TRP ILE GLY GLU ILE ASP SEQRES 5 Q 221 PRO SER ASP SER TYR PRO ASN TYR ASN GLU LYS PHE LYS SEQRES 6 Q 221 GLY LYS ALA THR LEU THR VAL ASP LYS SER SER SER THR SEQRES 7 Q 221 ALA TYR MET GLN LEU SER SER LEU THR SER GLU ASP SER SEQRES 8 Q 221 ALA VAL TYR TYR CYS ALA SER LEU TYR TYR TYR GLY THR SEQRES 9 Q 221 SER TYR GLY VAL LEU ASP TYR TRP GLY GLN GLY THR SER SEQRES 10 Q 221 VAL THR VAL SER SER ALA LYS THR THR PRO PRO SER VAL SEQRES 11 Q 221 TYR PRO LEU ALA PRO GLY SER ALA ALA GLN THR ASN SER SEQRES 12 Q 221 MET VAL THR LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO SEQRES 13 Q 221 GLU PRO VAL THR VAL THR TRP ASN SER GLY SER LEU SER SEQRES 14 Q 221 SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER ASP SEQRES 15 Q 221 LEU TYR THR LEU SER SER SER VAL THR VAL PRO SER SER SEQRES 16 Q 221 PRO ARG PRO SER GLU THR VAL THR CYS ASN VAL ALA HIS SEQRES 17 Q 221 PRO ALA SER SER THR LYS VAL ASP LYS LYS ILE VAL PRO SEQRES 1 Y 129 LYS VAL PHE GLY ARG CYS GLU LEU ALA ALA ALA MET LYS SEQRES 2 Y 129 ARG HIS GLY LEU ASP ASN TYR ARG GLY TYR SER LEU GLY SEQRES 3 Y 129 ASN TRP VAL CYS ALA ALA LYS PHE GLU SER ASN PHE ASN SEQRES 4 Y 129 SER GLN ALA THR ASN ARG ASN THR ASP GLY SER THR ASP SEQRES 5 Y 129 TYR GLY VAL LEU GLN ILE ASN SER ARG TRP TRP CYS ASN SEQRES 6 Y 129 ASP GLY ARG THR PRO GLY SER ARG ASN LEU CYS ASN ILE SEQRES 7 Y 129 PRO CYS SER ALA LEU GLN SER SER ASP ILE THR ALA THR SEQRES 8 Y 129 ALA ASN CYS ALA LYS LYS ILE VAL SER ASP GLY ASN GLY SEQRES 9 Y 129 MET ASN ALA TRP VAL ALA TRP ARG LYS HIS CYS LYS GLY SEQRES 10 Y 129 THR ASP VAL ARG VAL TRP ILE LYS GLY CYS ARG LEU HELIX 1 1 SER L 122 SER L 127 1 6 HELIX 2 2 LYS L 183 TYR L 186 1 4 HELIX 3 3 PHE H 29 SER H 31 5 3 HELIX 4 4 GLU H 62 PHE H 64 5 3 HELIX 5 5 THR H 104 TYR H 106 5 3 HELIX 6 6 SER H 194 PRO H 196 5 3 HELIX 7 7 ARG X 5 ARG X 14 1 10 HELIX 8 8 TYR X 20 GLY X 22 5 3 HELIX 9 9 LEU X 25 SER X 36 1 12 HELIX 10 10 CYS X 80 LEU X 83 5 4 HELIX 11 11 THR X 89 ASP X 101 1 13 HELIX 12 12 VAL X 109 HIS X 114 1 6 HELIX 13 13 VAL X 120 ILE X 124 5 5 HELIX 14 14 GLN P 80 ASP P 82 5 3 HELIX 15 15 SER P 122 SER P 127 1 6 HELIX 16 16 PRO Q 53 ASP Q 55 5 3 HELIX 17 17 GLU Q 62 PHE Q 64 5 3 HELIX 18 18 THR Q 104 TYR Q 106 5 3 HELIX 19 19 GLN Q 180 ASP Q 182 5 3 HELIX 20 20 ALA Q 210 SER Q 212 5 3 HELIX 21 21 GLU Y 7 HIS Y 15 1 9 HELIX 22 22 LEU Y 25 SER Y 36 1 12 HELIX 23 23 CYS Y 80 LEU Y 83 1 4 HELIX 24 24 THR Y 89 ILE Y 98 1 10 HELIX 25 25 GLY Y 104 TRP Y 108 5 5 HELIX 26 26 VAL Y 120 ILE Y 124 5 5 SHEET 1 A 2 SER L 10 ALA L 13 0 SHEET 2 A 2 LYS L 103 ILE L 106 1 N LYS L 103 O LEU L 11 SHEET 1 B 3 VAL L 19 ARG L 24 0 SHEET 2 B 3 ASP L 70 ILE L 75 -1 N ILE L 75 O VAL L 19 SHEET 3 B 3 GLY L 64 GLY L 66 -1 N SER L 65 O SER L 72 SHEET 1 C 3 ALA L 84 GLN L 90 0 SHEET 2 C 3 LEU L 33 LYS L 39 -1 N LYS L 38 O THR L 85 SHEET 3 C 3 VAL L 44 ILE L 48 -1 N ILE L 48 O TRP L 35 SHEET 1 D 2 GLY L 129 SER L 131 0 SHEET 2 D 2 THR L 180 THR L 182 -1 N LEU L 181 O ALA L 130 SHEET 1 E 3 TYR L 192 THR L 197 0 SHEET 2 E 3 ASN L 145 ILE L 150 -1 N LYS L 149 O THR L 193 SHEET 3 E 3 SER L 153 ARG L 155 -1 N ARG L 155 O TRP L 148 SHEET 1 F 6 ALA H 9 VAL H 12 0 SHEET 2 F 6 THR H 116 VAL H 120 1 N SER H 117 O GLU H 10 SHEET 3 F 6 ALA H 92 SER H 98 -1 N TYR H 94 O THR H 116 SHEET 4 F 6 TRP H 33 GLN H 39 -1 N GLN H 39 O VAL H 93 SHEET 5 F 6 LEU H 45 ASP H 52 -1 N ILE H 51 O MET H 34 SHEET 6 F 6 TYR H 57 TYR H 60 -1 N ASN H 59 O GLU H 50 SHEET 1 G 3 VAL H 18 LYS H 23 0 SHEET 2 G 3 THR H 78 LEU H 83 -1 N LEU H 83 O VAL H 18 SHEET 3 G 3 ALA H 68 ASP H 73 -1 N ASP H 73 O THR H 78 SHEET 1 H 2 MET H 144 CYS H 149 0 SHEET 2 H 2 SER H 188 PRO H 193 -1 N VAL H 192 O VAL H 145 SHEET 1 I 3 THR H 160 TRP H 163 0 SHEET 2 I 3 THR H 203 HIS H 208 -1 N ALA H 207 O THR H 160 SHEET 3 I 3 THR H 213 LYS H 218 -1 N LYS H 217 O CYS H 204 SHEET 1 J 2 VAL H 178 GLN H 180 0 SHEET 2 J 2 LEU H 183 THR H 185 -1 N THR H 185 O VAL H 178 SHEET 1 K 2 SER P 10 ALA P 13 0 SHEET 2 K 2 LYS P 103 ILE P 106 1 N LYS P 103 O LEU P 11 SHEET 1 L 3 ARG P 18 ARG P 24 0 SHEET 2 L 3 ASP P 70 ARG P 76 -1 N ILE P 75 O VAL P 19 SHEET 3 L 3 SER P 63 SER P 67 -1 N SER P 67 O ASP P 70 SHEET 1 M 3 THR P 85 GLN P 90 0 SHEET 2 M 3 LEU P 33 LYS P 38 -1 N LYS P 38 O THR P 85 SHEET 3 M 3 VAL P 44 ILE P 48 -1 N ILE P 48 O TRP P 35 SHEET 1 N 3 GLY P 129 VAL P 132 0 SHEET 2 N 3 MET P 175 THR P 182 -1 N LEU P 181 O ALA P 130 SHEET 3 N 3 VAL P 159 TRP P 163 -1 N SER P 162 O SER P 176 SHEET 1 O 2 ILE P 144 LYS P 149 0 SHEET 2 O 2 THR P 193 HIS P 198 -1 N THR P 197 O ASN P 145 SHEET 1 P 4 GLN Q 3 GLN Q 5 0 SHEET 2 P 4 VAL Q 18 SER Q 25 -1 N SER Q 25 O GLN Q 3 SHEET 3 P 4 THR Q 78 LEU Q 83 -1 N LEU Q 83 O VAL Q 18 SHEET 4 P 4 THR Q 71 ASP Q 73 -1 N ASP Q 73 O THR Q 78 SHEET 1 Q 3 VAL Q 93 LEU Q 99 0 SHEET 2 Q 3 TRP Q 33 GLN Q 39 -1 N GLN Q 39 O VAL Q 93 SHEET 3 Q 3 GLU Q 46 ASP Q 52 -1 N ILE Q 51 O MET Q 34 SHEET 1 R 4 SER Q 129 LEU Q 133 0 SHEET 2 R 4 MET Q 144 TYR Q 154 -1 N LYS Q 152 O SER Q 129 SHEET 3 R 4 TYR Q 184 PRO Q 193 -1 N VAL Q 192 O VAL Q 145 SHEET 4 R 4 VAL Q 172 PHE Q 175 -1 N PHE Q 175 O SER Q 187 SHEET 1 S 3 THR Q 160 TRP Q 163 0 SHEET 2 S 3 THR Q 203 ALA Q 207 -1 N ALA Q 207 O THR Q 160 SHEET 3 S 3 LYS Q 214 LYS Q 218 -1 N LYS Q 217 O CYS Q 204 SHEET 1 T 2 PHE L 135 PHE L 139 0 SHEET 2 T 2 TYR L 173 SER L 176 -1 N MET L 175 O LEU L 136 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.02 SSBOND 2 CYS L 134 CYS L 194 1555 1555 2.05 SSBOND 3 CYS H 22 CYS H 96 1555 1555 2.04 SSBOND 4 CYS H 149 CYS H 204 1555 1555 2.04 SSBOND 5 CYS X 6 CYS X 127 1555 1555 2.04 SSBOND 6 CYS X 30 CYS X 115 1555 1555 2.01 SSBOND 7 CYS X 64 CYS X 80 1555 1555 2.02 SSBOND 8 CYS X 76 CYS X 94 1555 1555 2.04 SSBOND 9 CYS P 23 CYS P 88 1555 1555 2.03 SSBOND 10 CYS P 134 CYS P 194 1555 1555 2.04 SSBOND 11 CYS Q 22 CYS Q 96 1555 1555 2.01 SSBOND 12 CYS Q 149 CYS Q 204 1555 1555 2.03 SSBOND 13 CYS Y 6 CYS Y 127 1555 1555 2.03 SSBOND 14 CYS Y 30 CYS Y 115 1555 1555 2.03 SSBOND 15 CYS Y 64 CYS Y 80 1555 1555 2.02 SSBOND 16 CYS Y 76 CYS Y 94 1555 1555 2.03 CISPEP 1 LEU L 94 PRO L 95 0 -0.20 CISPEP 2 TYR L 140 PRO L 141 0 0.16 CISPEP 3 PHE H 155 PRO H 156 0 -0.38 CISPEP 4 GLU H 157 PRO H 158 0 -0.50 CISPEP 5 ARG H 197 PRO H 198 0 0.12 CISPEP 6 LEU P 94 PRO P 95 0 -0.78 CISPEP 7 TYR P 140 PRO P 141 0 0.03 CISPEP 8 GLY Q 40 PRO Q 41 0 0.02 CISPEP 9 PHE Q 155 PRO Q 156 0 -0.33 CISPEP 10 GLU Q 157 PRO Q 158 0 0.08 CISPEP 11 ARG Q 197 PRO Q 198 0 0.21 CRYST1 83.700 195.500 50.200 90.00 108.50 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011947 0.000000 0.003998 0.00000 SCALE2 0.000000 0.005115 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021006 0.00000