PDB Short entry for 1FLS
HEADER    HYDROLASE                               15-AUG-00   1FLS              
TITLE     SOLUTION STRUCTURE OF THE CATALYTIC FRAGMENT OF HUMAN                 
TITLE    2 COLLAGENASE-3 (MMP-13) COMPLEXED WITH A HYDROXAMIC ACID              
TITLE    3 INHIBITOR                                                            
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: COLLAGENASE-3;                                             
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: CATALYTIC FRAGMENT;                                        
COMPND   5 SYNONYM: MMP-13;                                                     
COMPND   6 EC: 3.4.24.-;                                                        
COMPND   7 ENGINEERED: YES;                                                     
COMPND   8 OTHER_DETAILS: HYDROXAMIC ACID INHIBITOR COMPLEX                     
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   8 EXPRESSION_SYSTEM_PLASMID: PPROMMP-13                                
KEYWDS    MATRIX METALLOPROTEINASE, HYDROXAMIC ACID, HUMAN                      
KEYWDS   2 COLLAGENASE-3, MMP-13, HYDROLASE                                     
EXPDTA    SOLUTION NMR                                                          
MDLTYP    MINIMIZED AVERAGE                                                     
AUTHOR    F.J.MOY,P.K.CHANDA,J.M.CHEN,S.COSMI,W.EDRIS,J.I.LEVIN,                
AUTHOR   2 R.POWERS                                                             
REVDAT   2   24-FEB-09 1FLS    1       VERSN                                    
REVDAT   1   15-AUG-01 1FLS    0                                                
JRNL        AUTH   F.J.MOY,P.K.CHANDA,J.M.CHEN,S.COSMI,W.EDRIS,                 
JRNL        AUTH 2 J.I.LEVIN,R.POWERS                                           
JRNL        TITL   HIGH-RESOLUTION SOLUTION STRUCTURE OF THE                    
JRNL        TITL 2 CATALYTIC FRAGMENT OF HUMAN COLLAGENASE-3 (MMP-13)           
JRNL        TITL 3 COMPLEXED WITH A HYDROXAMIC ACID INHIBITOR.                  
JRNL        REF    J.MOL.BIOL.                   V. 302   671 2000              
JRNL        REFN                   ISSN 0022-2836                               
JRNL        PMID   10986126                                                     
JRNL        DOI    10.1006/JMBI.2000.4082                                       
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  AUTH   F.J MOY,P.K.CHANDA,S.COSMI,W.EDRIS,J.I.LEVIN,                
REMARK   1  AUTH 2 R.POWERS                                                     
REMARK   1  TITL   1H, 15N, 13C, AND 13CO ASSIGNMENTS AND SECONDARY             
REMARK   1  TITL 2 STRUCTURE DETERMINATION OF COLLAGENASE-3 (MMP-13)            
REMARK   1  TITL 3 COMPLEXED WITH A HYDROXAMIC ACID INHIBITOR                   
REMARK   1  REF    J.BIOMOL.NMR                  V.  17   269 2000              
REMARK   1  REFN                   ISSN 0925-2738                               
REMARK   1  DOI    10.1023/A:1008305025043                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : X-PLOR 3.840                                         
REMARK   3   AUTHORS     : BRUNGER                                              
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: THE STRUCTURE WAS BASED ON 3280           
REMARK   3  EXPERIMENTAL NMR RESTRAINTS, CONSISTING OF 2415 APPROXIMATE         
REMARK   3  INTERPROTON DISTANCE RESTRAINTS, 47 DISTANCE RESTRAINTS             
REMARK   3  BETWEEN MMP-13 AND WAY-151693, 5 INTRAMOLECULAR DISTANCE            
REMARK   3  RESTRAINTS FOR WAY-151693, 88 DISTANCE RESTRAINTS FOR 44            
REMARK   3  BACKBONE HYDROGEN BONDS, 391 TORSION ANGLE RESTRAINTS, 103          
REMARK   3  3JNHA RESTRAINTS 123 CA RESTRAINTS AND 108 CB RESTRAINTS.THE        
REMARK   3  STRUCTURE WAS ALSO REFINED WITH A CONFORMATIONAL DATABASE.          
REMARK   4                                                                      
REMARK   4 1FLS COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-AUG-00.                  
REMARK 100 THE RCSB ID CODE IS RCSB011695.                                      
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 308                                
REMARK 210  PH                             : 6.5                                
REMARK 210  IONIC STRENGTH                 : 10 MM DEUTERATED TRIS-BASE,        
REMARK 210                                   100 MM NACL, 5 MM CACL2, 0.1       
REMARK 210                                   MM ZNCL2, 2 MM NAN3, 10 MM         
REMARK 210                                   DEUTERATED DTT                     
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 1MM U-15N,13C-LABELED MMP-13       
REMARK 210                                   WITH WAY-151693 IN A 1:1           
REMARK 210                                   RATIO,10MM DEUTERATED TRIS-        
REMARK 210                                   BASE, 100MM NACL, 5MM CACL2,       
REMARK 210                                   0.1MM ZNCL2, 2MM NAN3, 10MM        
REMARK 210                                   DEUTERATED DTT IN 100% D2O AT      
REMARK 210                                   PH 6.5 AND 35C.; 1MM U-15N,13C     
REMARK 210                                   -LABELED MMP-13 WITH WAY-          
REMARK 210                                   151693 IN A 1:1 RATIO,10MM         
REMARK 210                                   DEUTERATED TRIS-BASE, 100MM        
REMARK 210                                   NACL, 5MM CACL2, 0.1MM ZNCL2,      
REMARK 210                                   2MM NAN3, 10MM DEUTERATED DTT      
REMARK 210                                   IN 90% H2O, 10% D2O AT PH 6.5      
REMARK 210                                   AND 35C.; 1MM U-15N-LABELED        
REMARK 210                                   MMP-13 WITH WAY-151693 IN A 1:     
REMARK 210                                   1 RATIO,10MM DEUTERATED TRIS-      
REMARK 210                                   BASE, 100MM NACL, 5MM CACL2,       
REMARK 210                                   0.1MM ZNCL2, 2MM NAN3, 10MM        
REMARK 210                                   DEUTERATED DTT IN 90% H2O, 10%     
REMARK 210                                   D2O AT PH 6.5 AND 35C.             
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 3D_13C-SEPARATED_NOESY, 3D_        
REMARK 210                                   15N-SEPARATED_NOESY, HNHA, 3D_     
REMARK 210                                   C13-EDITED/FILTERED_NOESY          
REMARK 210  SPECTROMETER FIELD STRENGTH    : 600 MHZ                            
REMARK 210  SPECTROMETER MODEL             : AMX-2                              
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : XWINNMR 2.0, NMRPIPE 1.7, X-       
REMARK 210                                   PLOR 3.840, PIPP 4.2.8             
REMARK 210   METHOD USED                   : DISTANCE GEOMETRY  SIMULATED       
REMARK 210                                   ANNEALING                          
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : NULL                               
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 1                                  
REMARK 210 CONFORMERS, SELECTION CRITERIA  : NULL                               
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE AND      
REMARK 210  ISOTOPE EDITED/FILTERED NMR SPECTROSCOPY.                           
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;                   
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                            
REMARK 465     RES C SSSEQI                                                     
REMARK 465     TYR A     1                                                      
REMARK 465     ASN A     2                                                      
REMARK 465     VAL A     3                                                      
REMARK 465     PHE A     4                                                      
REMARK 465     PRO A     5                                                      
REMARK 465     ARG A     6                                                      
REMARK 465     PRO A   165                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    THR A  23      136.81     50.39                                   
REMARK 500    PRO A  47       17.68    -67.08                                   
REMARK 500    LYS A  67      -84.23    -11.13                                   
REMARK 500    HIS A  69       37.22   -141.78                                   
REMARK 500    PRO A  88       85.39    -59.06                                   
REMARK 500    PRO A  90     -129.16    -65.28                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620  (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;              
REMARK 620  SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                            
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A 166  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HIS A 123   NE2                                                    
REMARK 620 2 HIS A 129   NE2  98.9                                              
REMARK 620 3 WAY A 169   O11 148.7  71.3                                        
REMARK 620 4 WAY A 169   O13 100.3 134.3  70.9                                  
REMARK 620 5 HIS A 119   NE2  74.2 130.9 135.0  94.3                            
REMARK 620 N                    1     2     3     4                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A 167  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HIS A  84   NE2                                                    
REMARK 620 2 HIS A  97   ND1 103.7                                              
REMARK 620 3 HIS A  69   NE2 117.0  90.1                                        
REMARK 620 N                    1     2                                         
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              CA A 168  CA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 LEU A  81   O                                                      
REMARK 620 2 ASP A  76   OD1 123.7                                              
REMARK 620 3 ASP A  99   OD2  47.2 134.1                                        
REMARK 620 4 SER A  79   O   142.7  47.4 169.9                                  
REMARK 620 5 GLY A  77   O   136.8  79.3  90.0  80.5                            
REMARK 620 6 PRO A  78   O   120.5 113.4 101.9  71.3  66.0                      
REMARK 620 7 GLU A 102   OE2  73.1 161.9  61.2 115.6  92.5  48.6                
REMARK 620 8 LEU A  81   N    58.8  76.2 104.5  85.6 155.2 128.2 112.1          
REMARK 620 N                    1     2     3     4     5     6     7           
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 166                  
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 167                  
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 168                  
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE WAY A 169                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1FM1   RELATED DB: PDB                                   
REMARK 900 ENSEMBLE OF 30 STRUCTURES                                            
DBREF  1FLS A    1   165  UNP    P45452   MMP13_HUMAN    104    268             
SEQRES   1 A  165  TYR ASN VAL PHE PRO ARG THR LEU LYS TRP SER LYS MET          
SEQRES   2 A  165  ASN LEU THR TYR ARG ILE VAL ASN TYR THR PRO ASP MET          
SEQRES   3 A  165  THR HIS SER GLU VAL GLU LYS ALA PHE LYS LYS ALA PHE          
SEQRES   4 A  165  LYS VAL TRP SER ASP VAL THR PRO LEU ASN PHE THR ARG          
SEQRES   5 A  165  LEU HIS ASP GLY ILE ALA ASP ILE MET ILE SER PHE GLY          
SEQRES   6 A  165  ILE LYS GLU HIS GLY ASP PHE TYR PRO PHE ASP GLY PRO          
SEQRES   7 A  165  SER GLY LEU LEU ALA HIS ALA PHE PRO PRO GLY PRO ASN          
SEQRES   8 A  165  TYR GLY GLY ASP ALA HIS PHE ASP ASP ASP GLU THR TRP          
SEQRES   9 A  165  THR SER SER SER LYS GLY TYR ASN LEU PHE LEU VAL ALA          
SEQRES  10 A  165  ALA HIS GLU PHE GLY HIS SER LEU GLY LEU ASP HIS SER          
SEQRES  11 A  165  LYS ASP PRO GLY ALA LEU MET PHE PRO ILE TYR THR TYR          
SEQRES  12 A  165  THR GLY LYS SER HIS PHE MET LEU PRO ASP ASP ASP VAL          
SEQRES  13 A  165  GLN GLY ILE GLN SER LEU TYR GLY PRO                          
HET     ZN  A 166       1                                                       
HET     ZN  A 167       1                                                       
HET     CA  A 168       1                                                       
HET    WAY  A 169      51                                                       
HETNAM      ZN ZINC ION                                                         
HETNAM      CA CALCIUM ION                                                      
HETNAM     WAY N-HYDROXY-2-[(4-METHOXY-BENZENESULFONYL)-PYRIDIN-3-              
HETNAM   2 WAY  YLMETHYL-AMINO]-3-METHYL-BENZAMIDE                              
HETSYN     WAY WAY-151693                                                       
FORMUL   2   ZN    2(ZN 2+)                                                     
FORMUL   4   CA    CA 2+                                                        
FORMUL   5  WAY    C21 H21 N3 O5 S                                              
HELIX    1   1 THR A   27  VAL A   45  1                                  19    
HELIX    2   2 LEU A  113  LEU A  125  1                                  13    
HELIX    3   3 PRO A  152  GLY A  164  1                                  13    
SHEET    1   A 5 ASN A  49  ARG A  52  0                                        
SHEET    2   A 5 ASN A  14  ILE A  19  1  N  LEU A  15   O  ASN A  49           
SHEET    3   A 5 ILE A  60  GLY A  65  1  N  ILE A  60   O  THR A  16           
SHEET    4   A 5 ALA A  96  ASP A  99  1  N  ALA A  96   O  MET A  61           
SHEET    5   A 5 ALA A  83  ALA A  85 -1  O  HIS A  84   N  HIS A  97           
SHEET    1   B 2 TRP A 104  THR A 105  0                                        
SHEET    2   B 2 TYR A 111  ASN A 112  1  O  TYR A 111   N  THR A 105           
LINK        ZN    ZN A 166                 NE2 HIS A 123     1555   1555  2.17  
LINK        ZN    ZN A 166                 NE2 HIS A 129     1555   1555  2.19  
LINK        ZN    ZN A 166                 O11 WAY A 169     1555   1555  2.28  
LINK        ZN    ZN A 166                 O13 WAY A 169     1555   1555  2.11  
LINK        ZN    ZN A 166                 NE2 HIS A 119     1555   1555  2.10  
LINK        ZN    ZN A 167                 NE2 HIS A  84     1555   1555  2.10  
LINK        ZN    ZN A 167                 ND1 HIS A  97     1555   1555  1.89  
LINK        ZN    ZN A 167                 NE2 HIS A  69     1555   1555  2.47  
LINK        CA    CA A 168                 O   LEU A  81     1555   1555  2.88  
LINK        CA    CA A 168                 OD1 ASP A  76     1555   1555  2.97  
LINK        CA    CA A 168                 OD2 ASP A  99     1555   1555  2.98  
LINK        CA    CA A 168                 O   SER A  79     1555   1555  2.91  
LINK        CA    CA A 168                 O   GLY A  77     1555   1555  2.89  
LINK        CA    CA A 168                 O   PRO A  78     1555   1555  2.98  
LINK        CA    CA A 168                 OE2 GLU A 102     1555   1555  2.97  
LINK        CA    CA A 168                 N   LEU A  81     1555   1555  3.26  
SITE     1 AC1  4 HIS A 119  HIS A 123  HIS A 129  WAY A 169                    
SITE     1 AC2  3 HIS A  69  HIS A  84  HIS A  97                               
SITE     1 AC3  8 ASP A  76  GLY A  77  PRO A  78  SER A  79                    
SITE     2 AC3  8 GLY A  80  LEU A  81  ASP A  99  GLU A 102                    
SITE     1 AC4 11 GLY A  80  LEU A  81  LEU A  82  LEU A 115                    
SITE     2 AC4 11 VAL A 116  HIS A 119  HIS A 123  HIS A 129                    
SITE     3 AC4 11 PRO A 139  TYR A 141   ZN A 166                               
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000