PDB Short entry for 1FS2 HEADER LIGASE 08-SEP-00 1FS2 TITLE INSIGHTS INTO SCF UBIQUITIN LIGASES FROM THE STRUCTURE OF THE SKP1- TITLE 2 SKP2 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: SKP2; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: RESIDUES 101-153; 193-410 (F-BOX + 8 LRRS); COMPND 5 SYNONYM: CYCLIN A/CDK2-ASSOCIATED P45; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SKP1; COMPND 9 CHAIN: B, D; COMPND 10 FRAGMENT: RESIDUES 1-37; 43-147; COMPND 11 SYNONYM: CYCLIN A/CDK2-ASSOCIATED P19; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SKP1, SKP2, F-BOX, LRRS, LEUCINE-RICH REPEATS, SCF, UBIQUITIN, E3, KEYWDS 2 UBIQUITIN PROTEIN LIGASE, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR B.A.SCHULMAN,A.C.CARRANO,P.D.JEFFREY,Z.BOWEN,E.R.E.KINNUCAN, AUTHOR 2 M.S.FINNIN,S.J.ELLEDGE,J.W.HARPER,M.PAGANO,N.P.PAVLETICH REVDAT 4 07-FEB-24 1FS2 1 SEQADV REVDAT 3 24-FEB-09 1FS2 1 VERSN REVDAT 2 01-APR-03 1FS2 1 JRNL REVDAT 1 29-NOV-00 1FS2 0 JRNL AUTH B.A.SCHULMAN,A.C.CARRANO,P.D.JEFFREY,Z.BOWEN,E.R.KINNUCAN, JRNL AUTH 2 M.S.FINNIN,S.J.ELLEDGE,J.W.HARPER,M.PAGANO,N.P.PAVLETICH JRNL TITL INSIGHTS INTO SCF UBIQUITIN LIGASES FROM THE STRUCTURE OF JRNL TITL 2 THE SKP1-SKP2 COMPLEX. JRNL REF NATURE V. 408 381 2000 JRNL REFN ISSN 0028-0836 JRNL PMID 11099048 JRNL DOI 10.1038/35042620 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.246 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6035 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1FS2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-OCT-00. REMARK 100 THE DEPOSITION ID IS D_1000011852. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.33500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.15000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.51000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 89.15000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.33500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.51000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 101 REMARK 465 GLU A 102 REMARK 465 ASN A 103 REMARK 465 PHE A 104 REMARK 465 CYS A 402 REMARK 465 SER A 403 REMARK 465 HIS A 404 REMARK 465 PHE A 405 REMARK 465 THR A 406 REMARK 465 THR A 407 REMARK 465 ILE A 408 REMARK 465 ALA A 409 REMARK 465 ARG A 410 REMARK 465 MET B 1 REMARK 465 PRO B 69 REMARK 465 PRO B 70 REMARK 465 PRO B 71 REMARK 465 PRO B 72 REMARK 465 GLU B 73 REMARK 465 ASP B 74 REMARK 465 ASP B 75 REMARK 465 GLU B 76 REMARK 465 ASN B 77 REMARK 465 LYS B 78 REMARK 465 GLU B 79 REMARK 465 GLU B 147 REMARK 465 ARG C 101 REMARK 465 GLU C 102 REMARK 465 ASN C 103 REMARK 465 PHE C 104 REMARK 465 CYS C 402 REMARK 465 SER C 403 REMARK 465 HIS C 404 REMARK 465 PHE C 405 REMARK 465 THR C 406 REMARK 465 THR C 407 REMARK 465 ILE C 408 REMARK 465 ALA C 409 REMARK 465 ARG C 410 REMARK 465 MET D 1 REMARK 465 PRO D 69 REMARK 465 PRO D 70 REMARK 465 PRO D 71 REMARK 465 PRO D 72 REMARK 465 GLU D 73 REMARK 465 ASP D 74 REMARK 465 ASP D 75 REMARK 465 GLU D 76 REMARK 465 ASN D 77 REMARK 465 LYS D 78 REMARK 465 GLU D 79 REMARK 465 GLU D 147 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 194 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 199 CB CG OD1 OD2 REMARK 470 LEU A 200 CB CG CD1 CD2 REMARK 470 SER A 201 CB OG REMARK 470 ASN A 202 CB CG OD1 ND2 REMARK 470 SER A 203 CB OG REMARK 470 PRO B 2 CG CD REMARK 470 LYS B 80 CB CG CD CE NZ REMARK 470 ARG B 81 CB CG CD NE CZ NH1 NH2 REMARK 470 THR B 82 CB OG1 CG2 REMARK 470 PRO C 105 CB CG CD REMARK 470 ARG C 194 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 196 CG CD OE1 NE2 REMARK 470 HIS C 197 CB CG ND1 CD2 CE1 NE2 REMARK 470 ASP C 199 CB CG OD1 OD2 REMARK 470 LEU C 200 CB CG CD1 CD2 REMARK 470 SER C 201 CB OG REMARK 470 ASN C 202 CB CG OD1 ND2 REMARK 470 SER C 203 CB OG REMARK 470 PRO D 2 CG CD REMARK 470 LYS D 80 CB CG CD CE NZ REMARK 470 ARG D 81 CB CG CD NE CZ NH1 NH2 REMARK 470 THR D 82 CB OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O MET A 198 N LEU A 200 1.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 106 N - CA - C ANGL. DEV. = -19.8 DEGREES REMARK 500 ARG A 138 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 PHE A 281 N - CA - C ANGL. DEV. = 16.4 DEGREES REMARK 500 PRO B 44 C - N - CA ANGL. DEV. = -9.4 DEGREES REMARK 500 THR B 82 N - CA - C ANGL. DEV. = -18.6 DEGREES REMARK 500 GLY C 106 N - CA - C ANGL. DEV. = -17.0 DEGREES REMARK 500 PHE C 281 N - CA - C ANGL. DEV. = 17.5 DEGREES REMARK 500 THR D 82 N - CA - C ANGL. DEV. = -18.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 110 -3.23 -57.24 REMARK 500 GLN A 150 -39.98 -30.12 REMARK 500 PHE A 193 111.20 -164.00 REMARK 500 MET A 198 67.78 -160.53 REMARK 500 ASP A 199 15.16 7.33 REMARK 500 LEU A 200 40.67 -85.79 REMARK 500 LEU A 230 -153.77 -108.83 REMARK 500 ALA A 239 -7.29 -56.05 REMARK 500 ASN A 241 78.40 -62.79 REMARK 500 ASN A 243 31.17 -94.75 REMARK 500 LEU A 275 53.52 -116.44 REMARK 500 TYR A 305 74.08 -100.49 REMARK 500 CYS A 321 76.56 -115.87 REMARK 500 VAL A 379 56.92 -142.28 REMARK 500 ARG B 81 -54.29 -170.08 REMARK 500 THR B 82 -9.96 115.73 REMARK 500 LEU C 126 -52.72 -28.91 REMARK 500 GLN C 150 -38.85 -29.60 REMARK 500 HIS C 197 44.09 -83.11 REMARK 500 ASP C 199 0.89 54.56 REMARK 500 LEU C 200 36.18 -70.83 REMARK 500 GLU C 226 134.33 -36.80 REMARK 500 LEU C 230 -153.20 -105.14 REMARK 500 ALA C 239 -5.71 -57.28 REMARK 500 ASN C 241 80.67 -61.29 REMARK 500 ASN C 243 34.28 -94.47 REMARK 500 LEU C 275 51.90 -118.14 REMARK 500 LEU C 302 51.72 -112.94 REMARK 500 CYS C 321 74.54 -119.20 REMARK 500 ASN C 347 7.73 -69.77 REMARK 500 TYR C 358 -23.63 -39.24 REMARK 500 VAL C 379 54.30 -143.65 REMARK 500 ASP D 37 -60.20 -91.64 REMARK 500 ARG D 81 -53.95 -171.95 REMARK 500 THR D 82 -10.07 116.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 PHE C 281 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FQV RELATED DB: PDB REMARK 900 1FQV IS A COMPLEX BETWEEN SKP1 AND SKP2 EXTENDING FROM THE F-BOX TO REMARK 900 THE C-TERMINUS REMARK 900 RELATED ID: 1FS1 RELATED DB: PDB REMARK 900 1FS1 IS A COMPLEX BETWEEN SKP1 AND A TRUNCATED SKP2 DBREF 1FS2 A 101 410 UNP Q13309 SKP2_HUMAN 89 398 DBREF 1FS2 B 1 147 UNP P63208 SKP1_HUMAN 1 146 DBREF 1FS2 C 101 410 UNP Q13309 SKP2_HUMAN 89 398 DBREF 1FS2 D 1 147 UNP P63208 SKP1_HUMAN 1 146 SEQADV 1FS2 B UNP P63208 ASP 38 DELETION SEQADV 1FS2 B UNP P63208 ASP 39 DELETION SEQADV 1FS2 B UNP P63208 GLU 40 DELETION SEQADV 1FS2 B UNP P63208 GLY 41 DELETION SEQADV 1FS2 B UNP P63208 ASP 42 DELETION SEQADV 1FS2 B UNP P63208 ASP 43 DELETION SEQADV 1FS2 D UNP P63208 ASP 38 DELETION SEQADV 1FS2 D UNP P63208 ASP 39 DELETION SEQADV 1FS2 D UNP P63208 GLU 40 DELETION SEQADV 1FS2 D UNP P63208 GLY 41 DELETION SEQADV 1FS2 D UNP P63208 ASP 42 DELETION SEQADV 1FS2 D UNP P63208 ASP 43 DELETION SEQRES 1 A 272 ARG GLU ASN PHE PRO GLY VAL SER TRP ASP SER LEU PRO SEQRES 2 A 272 ASP GLU LEU LEU LEU GLY ILE PHE SER CYS LEU CYS LEU SEQRES 3 A 272 PRO GLU LEU LEU LYS VAL SER GLY VAL CYS LYS ARG TRP SEQRES 4 A 272 TYR ARG LEU ALA SER ASP GLU SER LEU TRP GLN THR LEU SEQRES 5 A 272 ASP GLU PHE ARG VAL GLN HIS MET ASP LEU SER ASN SER SEQRES 6 A 272 VAL ILE GLU VAL SER THR LEU HIS GLY ILE LEU SER GLN SEQRES 7 A 272 CYS SER LYS LEU GLN ASN LEU SER LEU GLU GLY LEU ARG SEQRES 8 A 272 LEU SER ASP PRO ILE VAL ASN THR LEU ALA LYS ASN SER SEQRES 9 A 272 ASN LEU VAL ARG LEU ASN LEU SER GLY CYS SER GLY PHE SEQRES 10 A 272 SER GLU PHE ALA LEU GLN THR LEU LEU SER SER CYS SER SEQRES 11 A 272 ARG LEU ASP GLU LEU ASN LEU SER TRP CYS PHE ASP PHE SEQRES 12 A 272 THR GLU LYS HIS VAL GLN VAL ALA VAL ALA HIS VAL SER SEQRES 13 A 272 GLU THR ILE THR GLN LEU ASN LEU SER GLY TYR ARG LYS SEQRES 14 A 272 ASN LEU GLN LYS SER ASP LEU SER THR LEU VAL ARG ARG SEQRES 15 A 272 CYS PRO ASN LEU VAL HIS LEU ASP LEU SER ASP SER VAL SEQRES 16 A 272 MET LEU LYS ASN ASP CYS PHE GLN GLU PHE PHE GLN LEU SEQRES 17 A 272 ASN TYR LEU GLN HIS LEU SER LEU SER ARG CYS TYR ASP SEQRES 18 A 272 ILE ILE PRO GLU THR LEU LEU GLU LEU GLY GLU ILE PRO SEQRES 19 A 272 THR LEU LYS THR LEU GLN VAL PHE GLY ILE VAL PRO ASP SEQRES 20 A 272 GLY THR LEU GLN LEU LEU LYS GLU ALA LEU PRO HIS LEU SEQRES 21 A 272 GLN ILE ASN CYS SER HIS PHE THR THR ILE ALA ARG SEQRES 1 B 141 MET PRO SER ILE LYS LEU GLN SER SER ASP GLY GLU ILE SEQRES 2 B 141 PHE GLU VAL ASP VAL GLU ILE ALA LYS GLN SER VAL THR SEQRES 3 B 141 ILE LYS THR MET LEU GLU ASP LEU GLY MET ASP PRO VAL SEQRES 4 B 141 PRO LEU PRO ASN VAL ASN ALA ALA ILE LEU LYS LYS VAL SEQRES 5 B 141 ILE GLN TRP CYS THR HIS HIS LYS ASP ASP PRO PRO PRO SEQRES 6 B 141 PRO GLU ASP ASP GLU ASN LYS GLU LYS ARG THR ASP ASP SEQRES 7 B 141 ILE PRO VAL TRP ASP GLN GLU PHE LEU LYS VAL ASP GLN SEQRES 8 B 141 GLY THR LEU PHE GLU LEU ILE LEU ALA ALA ASN TYR LEU SEQRES 9 B 141 ASP ILE LYS GLY LEU LEU ASP VAL THR CYS LYS THR VAL SEQRES 10 B 141 ALA ASN MET ILE LYS GLY LYS THR PRO GLU GLU ILE ARG SEQRES 11 B 141 LYS THR PHE ASN ILE LYS ASN ASP PHE THR GLU SEQRES 1 C 272 ARG GLU ASN PHE PRO GLY VAL SER TRP ASP SER LEU PRO SEQRES 2 C 272 ASP GLU LEU LEU LEU GLY ILE PHE SER CYS LEU CYS LEU SEQRES 3 C 272 PRO GLU LEU LEU LYS VAL SER GLY VAL CYS LYS ARG TRP SEQRES 4 C 272 TYR ARG LEU ALA SER ASP GLU SER LEU TRP GLN THR LEU SEQRES 5 C 272 ASP GLU PHE ARG VAL GLN HIS MET ASP LEU SER ASN SER SEQRES 6 C 272 VAL ILE GLU VAL SER THR LEU HIS GLY ILE LEU SER GLN SEQRES 7 C 272 CYS SER LYS LEU GLN ASN LEU SER LEU GLU GLY LEU ARG SEQRES 8 C 272 LEU SER ASP PRO ILE VAL ASN THR LEU ALA LYS ASN SER SEQRES 9 C 272 ASN LEU VAL ARG LEU ASN LEU SER GLY CYS SER GLY PHE SEQRES 10 C 272 SER GLU PHE ALA LEU GLN THR LEU LEU SER SER CYS SER SEQRES 11 C 272 ARG LEU ASP GLU LEU ASN LEU SER TRP CYS PHE ASP PHE SEQRES 12 C 272 THR GLU LYS HIS VAL GLN VAL ALA VAL ALA HIS VAL SER SEQRES 13 C 272 GLU THR ILE THR GLN LEU ASN LEU SER GLY TYR ARG LYS SEQRES 14 C 272 ASN LEU GLN LYS SER ASP LEU SER THR LEU VAL ARG ARG SEQRES 15 C 272 CYS PRO ASN LEU VAL HIS LEU ASP LEU SER ASP SER VAL SEQRES 16 C 272 MET LEU LYS ASN ASP CYS PHE GLN GLU PHE PHE GLN LEU SEQRES 17 C 272 ASN TYR LEU GLN HIS LEU SER LEU SER ARG CYS TYR ASP SEQRES 18 C 272 ILE ILE PRO GLU THR LEU LEU GLU LEU GLY GLU ILE PRO SEQRES 19 C 272 THR LEU LYS THR LEU GLN VAL PHE GLY ILE VAL PRO ASP SEQRES 20 C 272 GLY THR LEU GLN LEU LEU LYS GLU ALA LEU PRO HIS LEU SEQRES 21 C 272 GLN ILE ASN CYS SER HIS PHE THR THR ILE ALA ARG SEQRES 1 D 141 MET PRO SER ILE LYS LEU GLN SER SER ASP GLY GLU ILE SEQRES 2 D 141 PHE GLU VAL ASP VAL GLU ILE ALA LYS GLN SER VAL THR SEQRES 3 D 141 ILE LYS THR MET LEU GLU ASP LEU GLY MET ASP PRO VAL SEQRES 4 D 141 PRO LEU PRO ASN VAL ASN ALA ALA ILE LEU LYS LYS VAL SEQRES 5 D 141 ILE GLN TRP CYS THR HIS HIS LYS ASP ASP PRO PRO PRO SEQRES 6 D 141 PRO GLU ASP ASP GLU ASN LYS GLU LYS ARG THR ASP ASP SEQRES 7 D 141 ILE PRO VAL TRP ASP GLN GLU PHE LEU LYS VAL ASP GLN SEQRES 8 D 141 GLY THR LEU PHE GLU LEU ILE LEU ALA ALA ASN TYR LEU SEQRES 9 D 141 ASP ILE LYS GLY LEU LEU ASP VAL THR CYS LYS THR VAL SEQRES 10 D 141 ALA ASN MET ILE LYS GLY LYS THR PRO GLU GLU ILE ARG SEQRES 11 D 141 LYS THR PHE ASN ILE LYS ASN ASP PHE THR GLU HELIX 1 1 SER A 108 LEU A 112 5 5 HELIX 2 2 PRO A 113 CYS A 123 1 11 HELIX 3 3 CYS A 125 SER A 133 1 9 HELIX 4 4 CYS A 136 SER A 144 1 9 HELIX 5 5 ASP A 145 GLN A 150 1 6 HELIX 6 6 GLN A 196 MET A 198 5 3 HELIX 7 7 GLU A 206 SER A 215 1 10 HELIX 8 8 SER A 231 ALA A 239 1 9 HELIX 9 9 SER A 256 CYS A 267 1 12 HELIX 10 10 THR A 282 VAL A 293 1 12 HELIX 11 11 GLN A 310 CYS A 321 1 12 HELIX 12 12 LYS A 336 ASP A 338 5 3 HELIX 13 13 CYS A 339 PHE A 344 1 6 HELIX 14 14 ILE A 361 ILE A 371 5 11 HELIX 15 15 PRO A 384 LEU A 395 1 12 HELIX 16 16 VAL B 18 LYS B 22 1 5 HELIX 17 17 SER B 24 LEU B 34 1 11 HELIX 18 18 ASN B 51 HIS B 65 1 15 HELIX 19 19 PRO B 86 LEU B 93 1 8 HELIX 20 20 ASP B 96 ASP B 111 1 16 HELIX 21 21 ILE B 112 LYS B 128 1 17 HELIX 22 22 THR B 131 ASN B 140 1 10 HELIX 23 23 SER C 108 LEU C 112 5 5 HELIX 24 24 PRO C 113 CYS C 123 1 11 HELIX 25 25 CYS C 125 SER C 133 1 9 HELIX 26 26 CYS C 136 SER C 144 1 9 HELIX 27 27 ASP C 145 GLN C 150 1 6 HELIX 28 28 GLN C 196 ASP C 199 5 4 HELIX 29 29 GLU C 206 SER C 215 1 10 HELIX 30 30 SER C 231 ALA C 239 1 9 HELIX 31 31 SER C 256 CYS C 267 1 12 HELIX 32 32 THR C 282 VAL C 293 1 12 HELIX 33 33 GLN C 310 CYS C 321 1 12 HELIX 34 34 LYS C 336 ASP C 338 5 3 HELIX 35 35 CYS C 339 PHE C 344 1 6 HELIX 36 36 ILE C 361 ILE C 371 5 11 HELIX 37 37 PRO C 384 LEU C 395 1 12 HELIX 38 38 VAL D 18 LYS D 22 1 5 HELIX 39 39 SER D 24 LEU D 34 1 11 HELIX 40 40 ASN D 51 HIS D 65 1 15 HELIX 41 41 PRO D 86 LEU D 93 1 8 HELIX 42 42 ASP D 96 ASP D 111 1 16 HELIX 43 43 ILE D 112 LYS D 128 1 17 HELIX 44 44 THR D 131 ASN D 140 1 10 SHEET 1 A 9 GLU A 192 ARG A 194 0 SHEET 2 A 9 ASN A 222 SER A 224 1 O ASN A 222 N PHE A 193 SHEET 3 A 9 ARG A 246 ASN A 248 1 O ARG A 246 N LEU A 223 SHEET 4 A 9 GLU A 272 ASN A 274 1 O GLU A 272 N LEU A 247 SHEET 5 A 9 GLN A 299 ASN A 301 1 O GLN A 299 N LEU A 273 SHEET 6 A 9 HIS A 326 ASP A 328 1 O HIS A 326 N LEU A 300 SHEET 7 A 9 HIS A 351 SER A 353 1 O HIS A 351 N LEU A 327 SHEET 8 A 9 THR A 376 GLN A 378 1 O THR A 376 N LEU A 352 SHEET 9 A 9 GLN A 399 ASN A 401 1 O GLN A 399 N LEU A 377 SHEET 1 B 3 ILE B 13 ASP B 17 0 SHEET 2 B 3 SER B 3 SER B 8 -1 N ILE B 4 O VAL B 16 SHEET 3 B 3 PRO B 44 LEU B 47 1 O VAL B 45 N GLN B 7 SHEET 1 C 9 GLU C 192 ARG C 194 0 SHEET 2 C 9 ASN C 222 SER C 224 1 O ASN C 222 N PHE C 193 SHEET 3 C 9 ARG C 246 ASN C 248 1 O ARG C 246 N LEU C 223 SHEET 4 C 9 GLU C 272 ASN C 274 1 O GLU C 272 N LEU C 247 SHEET 5 C 9 GLN C 299 ASN C 301 1 O GLN C 299 N LEU C 273 SHEET 6 C 9 HIS C 326 ASP C 328 1 O HIS C 326 N LEU C 300 SHEET 7 C 9 HIS C 351 SER C 353 1 O HIS C 351 N LEU C 327 SHEET 8 C 9 THR C 376 GLN C 378 1 O THR C 376 N LEU C 352 SHEET 9 C 9 GLN C 399 ASN C 401 1 O GLN C 399 N LEU C 377 SHEET 1 D 3 ILE D 13 ASP D 17 0 SHEET 2 D 3 SER D 3 SER D 8 -1 N ILE D 4 O VAL D 16 SHEET 3 D 3 PRO D 44 LEU D 47 1 O VAL D 45 N GLN D 7 CRYST1 72.670 87.020 178.300 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013761 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011492 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005609 0.00000