PDB Short entry for 1FZC HEADER BLOOD COAGULATION 19-MAY-98 1FZC TITLE CRYSTAL STRUCTURE OF FRAGMENT DOUBLE-D FROM HUMAN FIBRIN WITH TWO TITLE 2 DIFFERENT BOUND LIGANDS COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBRIN; COMPND 3 CHAIN: A, D; COMPND 4 FRAGMENT: DOUBLE-D; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FIBRIN; COMPND 7 CHAIN: B, E; COMPND 8 FRAGMENT: DOUBLE-D; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: FIBRIN; COMPND 11 CHAIN: C, F; COMPND 12 FRAGMENT: DOUBLE-D; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: FIBRIN; COMPND 15 CHAIN: G, H; COMPND 16 FRAGMENT: DOUBLE-D; COMPND 17 MOL_ID: 5; COMPND 18 MOLECULE: FIBRIN; COMPND 19 CHAIN: I, J; COMPND 20 FRAGMENT: DOUBLE-D SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 ORGAN: BLOOD; SOURCE 6 TISSUE: BLOOD; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 ORGAN: BLOOD; SOURCE 12 TISSUE: BLOOD; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_COMMON: HUMAN; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 ORGAN: BLOOD; SOURCE 18 TISSUE: BLOOD; SOURCE 19 MOL_ID: 4; SOURCE 20 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 21 ORGANISM_COMMON: HUMAN; SOURCE 22 ORGANISM_TAXID: 9606; SOURCE 23 TISSUE: BLOOD; SOURCE 24 MOL_ID: 5; SOURCE 25 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 26 ORGANISM_COMMON: HUMAN; SOURCE 27 ORGANISM_TAXID: 9606; SOURCE 28 TISSUE: BLOOD KEYWDS BLOOD COAGULATION, PLASMA PROTEIN, CROSSLINKING EXPDTA X-RAY DIFFRACTION AUTHOR S.J.EVERSE,G.SPRAGGON,L.VEERAPANDIAN,M.RILEY,R.F.DOOLITTLE REVDAT 5 03-APR-24 1FZC 1 HETSYN REVDAT 4 29-JUL-20 1FZC 1 COMPND REMARK SEQADV HETNAM REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 13-JUL-11 1FZC 1 VERSN REVDAT 2 24-FEB-09 1FZC 1 VERSN REVDAT 1 14-OCT-98 1FZC 0 JRNL AUTH S.J.EVERSE,G.SPRAGGON,L.VEERAPANDIAN,M.RILEY,R.F.DOOLITTLE JRNL TITL CRYSTAL STRUCTURE OF FRAGMENT DOUBLE-D FROM HUMAN FIBRIN JRNL TITL 2 WITH TWO DIFFERENT BOUND LIGANDS. JRNL REF BIOCHEMISTRY V. 37 8637 1998 JRNL REFN ISSN 0006-2960 JRNL PMID 9628725 JRNL DOI 10.1021/BI9804129 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH G.SPRAGGON,S.J.EVERSE,R.F.DOOLITTLE REMARK 1 TITL CRYSTAL STRUCTURES OF FRAGMENT D FROM HUMAN FIBRINOGEN AND REMARK 1 TITL 2 ITS CROSSLINKED COUNTERPART FROM FIBRIN REMARK 1 REF NATURE V. 389 455 1997 REMARK 1 REFN ISSN 0028-0836 REMARK 1 REFERENCE 2 REMARK 1 AUTH G.SPRAGGON,S.J.EVERSE,R.F.DOOLITTLE REMARK 1 TITL ERRATUM. CRYSTAL STRUCTURES OF FRAGMENT D FROM HUMAN REMARK 1 TITL 2 FIBRINOGEN AND ITS CROSSLINKED COUNTERPART FROM FIBRIN REMARK 1 REF NATURE V. 390 315 1997 REMARK 1 REFN ISSN 0028-0836 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.5 REMARK 3 NUMBER OF REFLECTIONS : 81081 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4086 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11092 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 71 REMARK 3 SOLVENT ATOMS : 431 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 X-PLOR WAS ALSO USED IN THE EARLY STAGES OF REFINEMENT. REMARK 3 REMARK 3 RESIDUES ASN B 364 AND ASN E 364 ARE GLYCOSYLATED BY REMARK 3 BIANNTENARY OLIGOSACCHARIDE CHAINS, ONLY THREE RESIDUES OF REMARK 3 WHICH WERE VISIBLE IN THE ELECTRON DENSITY FOR THE B CHAIN REMARK 3 AND TWO FOR THE E CHAIN. REMARK 4 REMARK 4 1FZC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000173466. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : AUG-97 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81010 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: FIBRINOGEN FRAGMENT D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG 3350, 50 MM TRIS PH 7.0, 5 MM REMARK 280 CALCIUM CHLORIDE, 1MM SODIUM AZIDE, 5MM GLY-PRO-ARG-PRO-AMIDE, REMARK 280 5MM GLY-HIS-ARG-PRO-AMIDE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.80000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J, REMARK 350 AND CHAINS: K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 111 REMARK 465 SER A 112 REMARK 465 GLU A 113 REMARK 465 ASP A 114 REMARK 465 LEU A 115 REMARK 465 ARG A 116 REMARK 465 SER A 117 REMARK 465 ARG A 118 REMARK 465 LEU A 193 REMARK 465 LEU A 194 REMARK 465 PRO A 195 REMARK 465 SER A 196 REMARK 465 ARG A 197 REMARK 465 ASP B 134 REMARK 465 ASN B 135 REMARK 465 GLU B 136 REMARK 465 ASN B 137 REMARK 465 VAL B 138 REMARK 465 VAL B 139 REMARK 465 ASN B 140 REMARK 465 GLU B 141 REMARK 465 TYR B 142 REMARK 465 SER B 143 REMARK 465 SER B 144 REMARK 465 GLU B 145 REMARK 465 LEU B 146 REMARK 465 GLU B 147 REMARK 465 LYS B 148 REMARK 465 HIS B 149 REMARK 465 GLN B 150 REMARK 465 PRO B 459 REMARK 465 GLN B 460 REMARK 465 GLN B 461 REMARK 465 LYS C 88 REMARK 465 MET C 89 REMARK 465 LEU C 90 REMARK 465 GLU C 91 REMARK 465 GLU C 92 REMARK 465 ILE C 93 REMARK 465 MET C 94 REMARK 465 LYS C 95 REMARK 465 TYR C 96 REMARK 465 GLN C 398 REMARK 465 GLN C 399 REMARK 465 HIS C 400 REMARK 465 HIS C 401 REMARK 465 LEU C 402 REMARK 465 GLY C 403 REMARK 465 GLY C 404 REMARK 465 ALA C 405 REMARK 465 LYS C 406 REMARK 465 VAL D 111 REMARK 465 SER D 112 REMARK 465 GLU D 113 REMARK 465 ASP D 114 REMARK 465 LEU D 115 REMARK 465 ARG D 116 REMARK 465 SER D 117 REMARK 465 ARG D 118 REMARK 465 LEU D 193 REMARK 465 LEU D 194 REMARK 465 PRO D 195 REMARK 465 SER D 196 REMARK 465 ARG D 197 REMARK 465 ASP E 134 REMARK 465 ASN E 135 REMARK 465 GLU E 136 REMARK 465 ASN E 137 REMARK 465 VAL E 138 REMARK 465 VAL E 139 REMARK 465 ASN E 140 REMARK 465 GLU E 141 REMARK 465 TYR E 142 REMARK 465 SER E 143 REMARK 465 SER E 144 REMARK 465 GLU E 145 REMARK 465 LEU E 146 REMARK 465 GLU E 147 REMARK 465 LYS E 148 REMARK 465 HIS E 149 REMARK 465 GLN E 150 REMARK 465 PRO E 459 REMARK 465 GLN E 460 REMARK 465 GLN E 461 REMARK 465 LYS F 88 REMARK 465 MET F 89 REMARK 465 LEU F 90 REMARK 465 GLU F 91 REMARK 465 GLU F 92 REMARK 465 ILE F 93 REMARK 465 MET F 94 REMARK 465 LYS F 95 REMARK 465 TYR F 96 REMARK 465 GLN F 398 REMARK 465 GLN F 399 REMARK 465 HIS F 400 REMARK 465 HIS F 401 REMARK 465 LEU F 402 REMARK 465 GLY F 403 REMARK 465 GLY F 404 REMARK 465 ALA F 405 REMARK 465 LYS F 406 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB THR C 277 CE1 PHE F 303 1.34 REMARK 500 NZ LYS A 123 N LEU B 151 1.48 REMARK 500 CG2 THR C 277 CZ PHE F 303 1.75 REMARK 500 CB THR C 277 CZ PHE F 303 1.80 REMARK 500 CG2 THR C 277 CE2 PHE F 303 1.83 REMARK 500 O4 NAG K 1 O5 NAG K 2 1.83 REMARK 500 OG1 THR C 277 CE1 PHE F 303 1.85 REMARK 500 CG2 THR C 277 CE1 PHE F 303 1.87 REMARK 500 OG1 THR C 277 CD1 PHE F 303 1.91 REMARK 500 N THR E 423 CE MET E 426 1.91 REMARK 500 O ASP B 257 OE2 GLU B 291 1.94 REMARK 500 O CYS B 394 O GLU B 397 1.94 REMARK 500 O PRO E 307 O PRO E 456 2.01 REMARK 500 O CYS E 394 O GLU E 397 2.04 REMARK 500 CG2 THR C 277 CD1 PHE F 303 2.06 REMARK 500 CG2 THR C 277 CD2 PHE F 303 2.07 REMARK 500 OD2 ASP F 152 OH TYR F 244 2.10 REMARK 500 O HOH E 561 O HOH E 581 2.13 REMARK 500 O HIS C 340 N GLY G 1 2.14 REMARK 500 CG GLU B 191 O HOH B 590 2.16 REMARK 500 NE2 GLN F 176 O HOH F 487 2.17 REMARK 500 O HOH B 581 O HOH B 582 2.17 REMARK 500 OG SER B 200 OG1 THR C 142 2.17 REMARK 500 NZ LYS C 212 OE1 GLU C 270 2.17 REMARK 500 O HOH D 199 O HOH E 540 2.17 REMARK 500 O MET B 367 O ASN B 405 2.18 REMARK 500 O HOH F 478 O HOH F 485 2.18 REMARK 500 O GLU E 155 N VAL E 157 2.18 REMARK 500 CD1 LEU A 135 O HOH A 207 2.19 REMARK 500 O PRO C 269 O LYS C 273 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY B 258 N GLY B 258 CA 0.108 REMARK 500 GLY B 295 N GLY B 295 CA 0.183 REMARK 500 GLY B 434 N GLY B 434 CA 0.172 REMARK 500 TYR C 274 N TYR C 274 CA 0.138 REMARK 500 SER E 184 CB SER E 184 OG -0.079 REMARK 500 GLY E 258 N GLY E 258 CA 0.155 REMARK 500 GLY E 295 N GLY E 295 CA 0.165 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 141 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ASP A 146 CB - CG - OD2 ANGL. DEV. = 9.7 DEGREES REMARK 500 ARG A 159 NE - CZ - NH1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG A 159 NE - CZ - NH2 ANGL. DEV. = -5.0 DEGREES REMARK 500 ARG A 167 CD - NE - CZ ANGL. DEV. = 18.8 DEGREES REMARK 500 ARG A 167 NH1 - CZ - NH2 ANGL. DEV. = -6.8 DEGREES REMARK 500 ARG A 167 NE - CZ - NH1 ANGL. DEV. = 9.3 DEGREES REMARK 500 ARG A 171 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG B 194 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG B 194 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 TYR B 225 CB - CG - CD1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ASP B 241 CB - CG - OD1 ANGL. DEV. = 8.4 DEGREES REMARK 500 ILE B 252 CA - CB - CG2 ANGL. DEV. = 19.0 DEGREES REMARK 500 ARG B 255 NE - CZ - NH1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP B 257 CA - C - N ANGL. DEV. = 15.4 DEGREES REMARK 500 ASP B 257 O - C - N ANGL. DEV. = -10.8 DEGREES REMARK 500 GLY B 258 C - N - CA ANGL. DEV. = -15.8 DEGREES REMARK 500 ASP B 261 CB - CG - OD1 ANGL. DEV. = 8.9 DEGREES REMARK 500 ARG B 264 NH1 - CZ - NH2 ANGL. DEV. = 7.7 DEGREES REMARK 500 ARG B 264 NE - CZ - NH1 ANGL. DEV. = -4.8 DEGREES REMARK 500 ASP B 267 CB - CG - OD2 ANGL. DEV. = -7.4 DEGREES REMARK 500 TYR B 269 CB - CG - CD1 ANGL. DEV. = -5.1 DEGREES REMARK 500 LEU B 294 CA - C - N ANGL. DEV. = 16.6 DEGREES REMARK 500 LEU B 294 O - C - N ANGL. DEV. = -15.6 DEGREES REMARK 500 GLY B 295 C - N - CA ANGL. DEV. = -16.6 DEGREES REMARK 500 ASP B 297 CB - CG - OD1 ANGL. DEV. = 9.5 DEGREES REMARK 500 ASP B 297 CB - CG - OD2 ANGL. DEV. = -7.6 DEGREES REMARK 500 ARG B 304 NE - CZ - NH2 ANGL. DEV. = 4.5 DEGREES REMARK 500 ASP B 316 CB - CG - OD2 ANGL. DEV. = -7.8 DEGREES REMARK 500 ASP B 320 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 TYR B 338 CB - CG - CD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 TYR B 338 CB - CG - CD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG B 346 N - CA - CB ANGL. DEV. = 14.8 DEGREES REMARK 500 ARG B 365 CD - NE - CZ ANGL. DEV. = 11.2 DEGREES REMARK 500 ARG B 365 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG B 380 NE - CZ - NH1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG B 380 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 ASP B 381 CB - CG - OD1 ANGL. DEV. = 7.4 DEGREES REMARK 500 ASP B 383 CB - CG - OD2 ANGL. DEV. = 9.8 DEGREES REMARK 500 ASN B 405 O - C - N ANGL. DEV. = -9.7 DEGREES REMARK 500 ARG B 415 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 TYR B 422 CB - CG - CD2 ANGL. DEV. = -5.3 DEGREES REMARK 500 TYR B 422 CB - CG - CD1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ASP B 432 CB - CG - OD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP B 433 CB - CG - OD1 ANGL. DEV. = 7.4 DEGREES REMARK 500 ASP B 433 CA - C - N ANGL. DEV. = 12.7 DEGREES REMARK 500 ASP B 433 O - C - N ANGL. DEV. = -12.2 DEGREES REMARK 500 GLY B 434 C - N - CA ANGL. DEV. = -20.2 DEGREES REMARK 500 ARG B 448 CD - NE - CZ ANGL. DEV. = 10.7 DEGREES REMARK 500 ARG B 448 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 165 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 121 15.56 -65.78 REMARK 500 LEU A 122 -121.66 -142.66 REMARK 500 LYS A 123 -24.26 -34.86 REMARK 500 LYS A 191 35.17 -75.63 REMARK 500 ASP B 154 34.36 -80.14 REMARK 500 THR B 156 -6.41 -52.10 REMARK 500 SER B 159 -81.40 -111.95 REMARK 500 GLU B 223 176.87 171.92 REMARK 500 GLU B 245 63.61 31.40 REMARK 500 ASN B 246 19.55 57.34 REMARK 500 GLN B 256 -17.42 -163.00 REMARK 500 ASP B 281 101.53 -49.12 REMARK 500 ASP B 398 -19.39 82.90 REMARK 500 ARG B 406 51.60 39.57 REMARK 500 ASN B 413 -2.84 93.08 REMARK 500 ASP B 433 -151.93 -99.33 REMARK 500 TRP B 440 -62.78 -96.08 REMARK 500 PRO B 456 -13.27 -46.15 REMARK 500 PHE B 457 -89.69 89.09 REMARK 500 ALA C 98 36.84 -85.18 REMARK 500 SER C 99 -46.16 -135.01 REMARK 500 LEU C 101 39.42 -62.13 REMARK 500 LEU C 198 -21.55 -152.96 REMARK 500 SER C 240 63.10 -1.90 REMARK 500 TRP C 253 18.45 -68.23 REMARK 500 LYS C 273 -143.46 58.82 REMARK 500 ASN C 317 84.15 -162.50 REMARK 500 ASN C 337 -87.83 -121.43 REMARK 500 LYS C 338 65.59 -156.24 REMARK 500 HIS C 343 71.75 -156.57 REMARK 500 ARG C 391 -146.33 -79.39 REMARK 500 LEU C 392 -139.43 -57.76 REMARK 500 THR C 393 70.31 49.53 REMARK 500 GLU C 396 -120.20 -77.45 REMARK 500 VAL D 121 -9.13 -54.00 REMARK 500 LEU D 122 -105.19 -116.31 REMARK 500 GLN D 187 -73.05 -46.91 REMARK 500 LYS D 191 40.75 -61.94 REMARK 500 ASP E 154 13.56 -62.06 REMARK 500 THR E 156 -9.94 -37.59 REMARK 500 SER E 159 -89.97 -107.35 REMARK 500 ILE E 161 -60.29 -25.56 REMARK 500 GLU E 223 -177.75 -173.40 REMARK 500 PRO E 235 150.81 -49.31 REMARK 500 GLU E 245 55.99 35.21 REMARK 500 GLN E 256 -24.70 -163.84 REMARK 500 ASP E 281 109.49 -43.10 REMARK 500 ASP E 398 -33.59 83.01 REMARK 500 ASN E 413 -2.33 77.40 REMARK 500 ASP E 433 -156.67 -87.20 REMARK 500 REMARK 500 THIS ENTRY HAS 67 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 TYR C 274 10.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 MAN B 472 REMARK 610 NAG J 471 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 2 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 381 OD2 REMARK 620 2 ASP B 381 OD1 46.7 REMARK 620 3 ASP B 383 OD1 115.3 73.0 REMARK 620 4 TRP B 385 O 158.2 152.7 80.0 REMARK 620 5 HOH B 570 O 104.0 88.1 93.3 89.7 REMARK 620 6 HOH B 595 O 70.5 86.5 87.4 96.2 174.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 1 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 318 OD2 REMARK 620 2 ASP C 318 OD1 52.9 REMARK 620 3 ASP C 320 OD1 111.6 69.6 REMARK 620 4 PHE C 322 O 156.1 149.4 82.6 REMARK 620 5 GLY C 324 O 83.6 115.6 91.9 76.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA E 2 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP E 381 OD2 REMARK 620 2 ASP E 381 OD1 46.7 REMARK 620 3 ASP E 383 OD1 115.2 68.7 REMARK 620 4 TRP E 385 O 160.7 146.5 78.9 REMARK 620 5 HOH E 475 O 89.5 85.8 79.5 79.9 REMARK 620 6 HOH E 517 O 93.4 108.0 113.7 92.4 163.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA F 1 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 318 OD1 REMARK 620 2 ASP F 318 OD2 46.7 REMARK 620 3 ASP F 320 OD1 78.1 113.3 REMARK 620 4 ASP F 320 OD2 70.9 82.5 40.1 REMARK 620 5 PHE F 322 O 138.3 169.1 77.4 108.1 REMARK 620 6 GLY F 324 O 127.7 86.2 110.1 83.5 92.4 REMARK 620 7 HOH F 475 O 98.3 83.1 149.0 165.6 86.3 96.5 REMARK 620 N 1 2 3 4 5 6 REMARK 999 REMARK 999 SEQUENCE REMARK 999 G1-G4: THIS PEPTIDE MIMICS A17-A20 OF THE FIBRIN SEQUENCE REMARK 999 WITH PRO G 4 REPLACING VAL A 20 OF THE FIBRIN SEQUENCE. REMARK 999 REMARK 999 H1-H4: THIS PEPTIDE MIMICS D17-D20 OF THE FIBRIN SEQUENCE REMARK 999 WITH PRO H 4 REPLACING VAL D 20 OF THE FIBRIN SEQUENCE. REMARK 999 REMARK 999 I1-I4: THIS PEPTIDE MIMICS B15-B18 OF THE FIBRIN SEQUENCE. REMARK 999 REMARK 999 J1-J4: THIS PEPTIDE MIMICS E15-E18 OF THE FIBRIN SEQUENCE. DBREF 1FZC A 111 197 UNP P02671 FIBA_HUMAN 130 216 DBREF 1FZC B 134 461 UNP P02675 FIBB_HUMAN 164 491 DBREF 1FZC C 88 406 UNP P02679 FIBG_HUMAN 111 432 DBREF 1FZC D 111 197 UNP P02671 FIBA_HUMAN 130 216 DBREF 1FZC E 134 461 UNP P02675 FIBB_HUMAN 164 491 DBREF 1FZC F 88 406 UNP P02679 FIBG_HUMAN 111 432 DBREF 1FZC G 1 4 PDB 1FZC 1FZC 1 4 DBREF 1FZC H 1 4 PDB 1FZC 1FZC 1 4 DBREF 1FZC I 1 4 PDB 1FZC 1FZC 1 4 DBREF 1FZC J 1 4 PDB 1FZC 1FZC 1 4 SEQADV 1FZC LYS C 88 UNP P02679 ILE 114 CONFLICT SEQADV 1FZC LYS F 88 UNP P02679 ILE 114 CONFLICT SEQRES 1 A 87 VAL SER GLU ASP LEU ARG SER ARG ILE GLU VAL LEU LYS SEQRES 2 A 87 ARG LYS VAL ILE GLU LYS VAL GLN HIS ILE GLN LEU LEU SEQRES 3 A 87 GLN LYS ASN VAL ARG ALA GLN LEU VAL ASP MET LYS ARG SEQRES 4 A 87 LEU GLU VAL ASP ILE ASP ILE LYS ILE ARG SER CYS ARG SEQRES 5 A 87 GLY SER CYS SER ARG ALA LEU ALA ARG GLU VAL ASP LEU SEQRES 6 A 87 LYS ASP TYR GLU ASP GLN GLN LYS GLN LEU GLU GLN VAL SEQRES 7 A 87 ILE ALA LYS ASP LEU LEU PRO SER ARG SEQRES 1 B 328 ASP ASN GLU ASN VAL VAL ASN GLU TYR SER SER GLU LEU SEQRES 2 B 328 GLU LYS HIS GLN LEU TYR ILE ASP GLU THR VAL ASN SER SEQRES 3 B 328 ASN ILE PRO THR ASN LEU ARG VAL LEU ARG SER ILE LEU SEQRES 4 B 328 GLU ASN LEU ARG SER LYS ILE GLN LYS LEU GLU SER ASP SEQRES 5 B 328 VAL SER ALA GLN MET GLU TYR CYS ARG THR PRO CYS THR SEQRES 6 B 328 VAL SER CYS ASN ILE PRO VAL VAL SER GLY LYS GLU CYS SEQRES 7 B 328 GLU GLU ILE ILE ARG LYS GLY GLY GLU THR SER GLU MET SEQRES 8 B 328 TYR LEU ILE GLN PRO ASP SER SER VAL LYS PRO TYR ARG SEQRES 9 B 328 VAL TYR CYS ASP MET ASN THR GLU ASN GLY GLY TRP THR SEQRES 10 B 328 VAL ILE GLN ASN ARG GLN ASP GLY SER VAL ASP PHE GLY SEQRES 11 B 328 ARG LYS TRP ASP PRO TYR LYS GLN GLY PHE GLY ASN VAL SEQRES 12 B 328 ALA THR ASN THR ASP GLY LYS ASN TYR CYS GLY LEU PRO SEQRES 13 B 328 GLY GLU TYR TRP LEU GLY ASN ASP LYS ILE SER GLN LEU SEQRES 14 B 328 THR ARG MET GLY PRO THR GLU LEU LEU ILE GLU MET GLU SEQRES 15 B 328 ASP TRP LYS GLY ASP LYS VAL LYS ALA HIS TYR GLY GLY SEQRES 16 B 328 PHE THR VAL GLN ASN GLU ALA ASN LYS TYR GLN ILE SER SEQRES 17 B 328 VAL ASN LYS TYR ARG GLY THR ALA GLY ASN ALA LEU MET SEQRES 18 B 328 ASP GLY ALA SER GLN LEU MET GLY GLU ASN ARG THR MET SEQRES 19 B 328 THR ILE HIS ASN GLY MET PHE PHE SER THR TYR ASP ARG SEQRES 20 B 328 ASP ASN ASP GLY TRP LEU THR SER ASP PRO ARG LYS GLN SEQRES 21 B 328 CYS SER LYS GLU ASP GLY GLY GLY TRP TRP TYR ASN ARG SEQRES 22 B 328 CYS HIS ALA ALA ASN PRO ASN GLY ARG TYR TYR TRP GLY SEQRES 23 B 328 GLY GLN TYR THR TRP ASP MET ALA LYS HIS GLY THR ASP SEQRES 24 B 328 ASP GLY VAL VAL TRP MET ASN TRP LYS GLY SER TRP TYR SEQRES 25 B 328 SER MET ARG LYS MET SER MET LYS ILE ARG PRO PHE PHE SEQRES 26 B 328 PRO GLN GLN SEQRES 1 C 319 LYS MET LEU GLU GLU ILE MET LYS TYR GLU ALA SER ILE SEQRES 2 C 319 LEU THR HIS ASP SER SER ILE ARG TYR LEU GLN GLU ILE SEQRES 3 C 319 TYR ASN SER ASN ASN GLN LYS ILE VAL ASN LEU LYS GLU SEQRES 4 C 319 LYS VAL ALA GLN LEU GLU ALA GLN CYS GLN GLU PRO CYS SEQRES 5 C 319 LYS ASP THR VAL GLN ILE HIS ASP ILE THR GLY LYS ASP SEQRES 6 C 319 CYS GLN ASP ILE ALA ASN LYS GLY ALA LYS GLN SER GLY SEQRES 7 C 319 LEU TYR PHE ILE LYS PRO LEU LYS ALA ASN GLN GLN PHE SEQRES 8 C 319 LEU VAL TYR CYS GLU ILE ASP GLY SER GLY ASN GLY TRP SEQRES 9 C 319 THR VAL PHE GLN LYS ARG LEU ASP GLY SER VAL ASP PHE SEQRES 10 C 319 LYS LYS ASN TRP ILE GLN TYR LYS GLU GLY PHE GLY HIS SEQRES 11 C 319 LEU SER PRO THR GLY THR THR GLU PHE TRP LEU GLY ASN SEQRES 12 C 319 GLU LYS ILE HIS LEU ILE SER THR GLN SER ALA ILE PRO SEQRES 13 C 319 TYR ALA LEU ARG VAL GLU LEU GLU ASP TRP ASN GLY ARG SEQRES 14 C 319 THR SER THR ALA ASP TYR ALA MET PHE LYS VAL GLY PRO SEQRES 15 C 319 GLU ALA ASP LYS TYR ARG LEU THR TYR ALA TYR PHE ALA SEQRES 16 C 319 GLY GLY ASP ALA GLY ASP ALA PHE ASP GLY PHE ASP PHE SEQRES 17 C 319 GLY ASP ASP PRO SER ASP LYS PHE PHE THR SER HIS ASN SEQRES 18 C 319 GLY MET GLN PHE SER THR TRP ASP ASN ASP ASN ASP LYS SEQRES 19 C 319 PHE GLU GLY ASN CYS ALA GLU GLN ASP GLY SER GLY TRP SEQRES 20 C 319 TRP MET ASN LYS CYS HIS ALA GLY HIS LEU ASN GLY VAL SEQRES 21 C 319 TYR TYR GLN GLY GLY THR TYR SER LYS ALA SER THR PRO SEQRES 22 C 319 ASN GLY TYR ASP ASN GLY ILE ILE TRP ALA THR TRP LYS SEQRES 23 C 319 THR ARG TRP TYR SER MET LYS LYS THR THR MET LYS ILE SEQRES 24 C 319 ILE PRO PHE ASN ARG LEU THR ILE GLY GLU GLY GLN GLN SEQRES 25 C 319 HIS HIS LEU GLY GLY ALA LYS SEQRES 1 D 87 VAL SER GLU ASP LEU ARG SER ARG ILE GLU VAL LEU LYS SEQRES 2 D 87 ARG LYS VAL ILE GLU LYS VAL GLN HIS ILE GLN LEU LEU SEQRES 3 D 87 GLN LYS ASN VAL ARG ALA GLN LEU VAL ASP MET LYS ARG SEQRES 4 D 87 LEU GLU VAL ASP ILE ASP ILE LYS ILE ARG SER CYS ARG SEQRES 5 D 87 GLY SER CYS SER ARG ALA LEU ALA ARG GLU VAL ASP LEU SEQRES 6 D 87 LYS ASP TYR GLU ASP GLN GLN LYS GLN LEU GLU GLN VAL SEQRES 7 D 87 ILE ALA LYS ASP LEU LEU PRO SER ARG SEQRES 1 E 328 ASP ASN GLU ASN VAL VAL ASN GLU TYR SER SER GLU LEU SEQRES 2 E 328 GLU LYS HIS GLN LEU TYR ILE ASP GLU THR VAL ASN SER SEQRES 3 E 328 ASN ILE PRO THR ASN LEU ARG VAL LEU ARG SER ILE LEU SEQRES 4 E 328 GLU ASN LEU ARG SER LYS ILE GLN LYS LEU GLU SER ASP SEQRES 5 E 328 VAL SER ALA GLN MET GLU TYR CYS ARG THR PRO CYS THR SEQRES 6 E 328 VAL SER CYS ASN ILE PRO VAL VAL SER GLY LYS GLU CYS SEQRES 7 E 328 GLU GLU ILE ILE ARG LYS GLY GLY GLU THR SER GLU MET SEQRES 8 E 328 TYR LEU ILE GLN PRO ASP SER SER VAL LYS PRO TYR ARG SEQRES 9 E 328 VAL TYR CYS ASP MET ASN THR GLU ASN GLY GLY TRP THR SEQRES 10 E 328 VAL ILE GLN ASN ARG GLN ASP GLY SER VAL ASP PHE GLY SEQRES 11 E 328 ARG LYS TRP ASP PRO TYR LYS GLN GLY PHE GLY ASN VAL SEQRES 12 E 328 ALA THR ASN THR ASP GLY LYS ASN TYR CYS GLY LEU PRO SEQRES 13 E 328 GLY GLU TYR TRP LEU GLY ASN ASP LYS ILE SER GLN LEU SEQRES 14 E 328 THR ARG MET GLY PRO THR GLU LEU LEU ILE GLU MET GLU SEQRES 15 E 328 ASP TRP LYS GLY ASP LYS VAL LYS ALA HIS TYR GLY GLY SEQRES 16 E 328 PHE THR VAL GLN ASN GLU ALA ASN LYS TYR GLN ILE SER SEQRES 17 E 328 VAL ASN LYS TYR ARG GLY THR ALA GLY ASN ALA LEU MET SEQRES 18 E 328 ASP GLY ALA SER GLN LEU MET GLY GLU ASN ARG THR MET SEQRES 19 E 328 THR ILE HIS ASN GLY MET PHE PHE SER THR TYR ASP ARG SEQRES 20 E 328 ASP ASN ASP GLY TRP LEU THR SER ASP PRO ARG LYS GLN SEQRES 21 E 328 CYS SER LYS GLU ASP GLY GLY GLY TRP TRP TYR ASN ARG SEQRES 22 E 328 CYS HIS ALA ALA ASN PRO ASN GLY ARG TYR TYR TRP GLY SEQRES 23 E 328 GLY GLN TYR THR TRP ASP MET ALA LYS HIS GLY THR ASP SEQRES 24 E 328 ASP GLY VAL VAL TRP MET ASN TRP LYS GLY SER TRP TYR SEQRES 25 E 328 SER MET ARG LYS MET SER MET LYS ILE ARG PRO PHE PHE SEQRES 26 E 328 PRO GLN GLN SEQRES 1 F 319 LYS MET LEU GLU GLU ILE MET LYS TYR GLU ALA SER ILE SEQRES 2 F 319 LEU THR HIS ASP SER SER ILE ARG TYR LEU GLN GLU ILE SEQRES 3 F 319 TYR ASN SER ASN ASN GLN LYS ILE VAL ASN LEU LYS GLU SEQRES 4 F 319 LYS VAL ALA GLN LEU GLU ALA GLN CYS GLN GLU PRO CYS SEQRES 5 F 319 LYS ASP THR VAL GLN ILE HIS ASP ILE THR GLY LYS ASP SEQRES 6 F 319 CYS GLN ASP ILE ALA ASN LYS GLY ALA LYS GLN SER GLY SEQRES 7 F 319 LEU TYR PHE ILE LYS PRO LEU LYS ALA ASN GLN GLN PHE SEQRES 8 F 319 LEU VAL TYR CYS GLU ILE ASP GLY SER GLY ASN GLY TRP SEQRES 9 F 319 THR VAL PHE GLN LYS ARG LEU ASP GLY SER VAL ASP PHE SEQRES 10 F 319 LYS LYS ASN TRP ILE GLN TYR LYS GLU GLY PHE GLY HIS SEQRES 11 F 319 LEU SER PRO THR GLY THR THR GLU PHE TRP LEU GLY ASN SEQRES 12 F 319 GLU LYS ILE HIS LEU ILE SER THR GLN SER ALA ILE PRO SEQRES 13 F 319 TYR ALA LEU ARG VAL GLU LEU GLU ASP TRP ASN GLY ARG SEQRES 14 F 319 THR SER THR ALA ASP TYR ALA MET PHE LYS VAL GLY PRO SEQRES 15 F 319 GLU ALA ASP LYS TYR ARG LEU THR TYR ALA TYR PHE ALA SEQRES 16 F 319 GLY GLY ASP ALA GLY ASP ALA PHE ASP GLY PHE ASP PHE SEQRES 17 F 319 GLY ASP ASP PRO SER ASP LYS PHE PHE THR SER HIS ASN SEQRES 18 F 319 GLY MET GLN PHE SER THR TRP ASP ASN ASP ASN ASP LYS SEQRES 19 F 319 PHE GLU GLY ASN CYS ALA GLU GLN ASP GLY SER GLY TRP SEQRES 20 F 319 TRP MET ASN LYS CYS HIS ALA GLY HIS LEU ASN GLY VAL SEQRES 21 F 319 TYR TYR GLN GLY GLY THR TYR SER LYS ALA SER THR PRO SEQRES 22 F 319 ASN GLY TYR ASP ASN GLY ILE ILE TRP ALA THR TRP LYS SEQRES 23 F 319 THR ARG TRP TYR SER MET LYS LYS THR THR MET LYS ILE SEQRES 24 F 319 ILE PRO PHE ASN ARG LEU THR ILE GLY GLU GLY GLN GLN SEQRES 25 F 319 HIS HIS LEU GLY GLY ALA LYS SEQRES 1 G 4 GLY PRO ARG PRO SEQRES 1 H 4 GLY PRO ARG PRO SEQRES 1 I 4 GLY HIS ARG PRO SEQRES 1 J 4 GLY HIS ARG PRO MODRES 1FZC ASN B 364 ASN GLYCOSYLATION SITE MODRES 1FZC ASN E 364 ASN GLYCOSYLATION SITE HET NAG K 1 14 HET NAG K 2 14 HET MAN B 472 11 HET CA B 2 1 HET CA C 1 1 HET NAG E 470 14 HET CA E 2 1 HET CA F 1 1 HET NAG J 471 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM CA CALCIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 11 NAG 4(C8 H15 N O6) FORMUL 12 MAN C6 H12 O6 FORMUL 13 CA 4(CA 2+) FORMUL 19 HOH *431(H2 O) HELIX 1 1 LYS A 123 CYS A 161 1 39 HELIX 2 2 LYS A 176 ALA A 190 1 15 HELIX 3 3 ASN B 160 ARG B 194 1 35 HELIX 4 4 CYS B 211 ARG B 216 1 6 HELIX 5 5 THR B 244 ASN B 246 5 3 HELIX 6 6 TRP B 266 GLN B 271 1 6 HELIX 7 7 ASN B 296 MET B 305 1 10 HELIX 8 8 GLU B 334 ASN B 336 5 3 HELIX 9 9 ALA B 352 ASP B 355 1 4 HELIX 10 10 GLY B 362 THR B 368 1 7 HELIX 11 11 MET B 438 LYS B 441 1 4 HELIX 12 12 HIS C 103 GLN C 134 1 32 HELIX 13 13 CYS C 153 ALA C 157 1 5 HELIX 14 14 TRP C 208 GLU C 213 1 6 HELIX 15 15 ASN C 230 SER C 237 1 8 HELIX 16 16 GLU C 270 ASP C 272 5 3 HELIX 17 17 ALA C 289 ASP C 291 5 3 HELIX 18 18 ASP C 301 PHE C 304 1 4 HELIX 19 19 CYS C 326 ASP C 330 1 5 HELIX 20 20 LYS C 356 SER C 358 5 3 HELIX 21 21 LYS D 123 CYS D 161 1 39 HELIX 22 22 LYS D 176 ALA D 190 1 15 HELIX 23 23 TYR E 152 GLU E 155 5 4 HELIX 24 24 ASN E 160 ARG E 194 1 35 HELIX 25 25 CYS E 211 ARG E 216 1 6 HELIX 26 26 THR E 244 ASN E 246 5 3 HELIX 27 27 TRP E 266 GLN E 271 1 6 HELIX 28 28 ASN E 296 MET E 305 1 10 HELIX 29 29 GLU E 334 ASN E 336 5 3 HELIX 30 30 ALA E 352 ASP E 355 1 4 HELIX 31 31 GLY E 362 THR E 368 5 7 HELIX 32 32 MET E 438 LYS E 441 1 4 HELIX 33 33 HIS F 103 GLN F 134 1 32 HELIX 34 34 CYS F 153 ASN F 158 1 6 HELIX 35 35 TRP F 208 GLU F 213 1 6 HELIX 36 36 ASN F 230 SER F 237 1 8 HELIX 37 37 ALA F 289 ASP F 291 5 3 HELIX 38 38 CYS F 326 ASP F 330 1 5 HELIX 39 39 LYS F 356 SER F 358 5 3 SHEET 1 A 2 GLU B 223 ILE B 227 0 SHEET 2 A 2 TYR B 236 CYS B 240 -1 N CYS B 240 O GLU B 223 SHEET 1 B 2 GLY B 272 GLY B 274 0 SHEET 2 B 2 TYR B 292 LEU B 294 -1 N TRP B 293 O PHE B 273 SHEET 1 C 5 TYR B 345 GLY B 347 0 SHEET 2 C 5 LYS B 321 TYR B 326 -1 N HIS B 325 O ARG B 346 SHEET 3 C 5 GLU B 309 GLU B 315 -1 N MET B 314 O VAL B 322 SHEET 4 C 5 LYS B 449 ARG B 455 -1 N ARG B 455 O GLU B 309 SHEET 5 C 5 THR B 250 ARG B 255 -1 N ARG B 255 O MET B 450 SHEET 1 D 2 GLY B 328 VAL B 331 0 SHEET 2 D 2 ILE B 340 ASN B 343 -1 N ASN B 343 O GLY B 328 SHEET 1 E 6 GLY C 165 ILE C 169 0 SHEET 2 E 6 PHE C 178 ILE C 184 -1 N CYS C 182 O GLY C 165 SHEET 3 E 6 GLY C 190 ARG C 197 -1 N TRP C 191 O GLU C 183 SHEET 4 E 6 LYS C 381 PRO C 388 -1 N ILE C 386 O THR C 192 SHEET 5 E 6 TYR C 244 GLU C 251 -1 N GLU C 251 O LYS C 381 SHEET 6 E 6 THR C 257 ALA C 263 -1 N TYR C 262 O LEU C 246 SHEET 1 F 2 GLU E 223 ILE E 227 0 SHEET 2 F 2 TYR E 236 CYS E 240 -1 N CYS E 240 O GLU E 223 SHEET 1 G 2 GLY E 272 GLY E 274 0 SHEET 2 G 2 TYR E 292 LEU E 294 -1 N TRP E 293 O PHE E 273 SHEET 1 H 5 TYR E 345 GLY E 347 0 SHEET 2 H 5 LYS E 321 TYR E 326 -1 N HIS E 325 O ARG E 346 SHEET 3 H 5 GLU E 309 GLU E 315 -1 N MET E 314 O VAL E 322 SHEET 4 H 5 LYS E 449 ARG E 455 -1 N ARG E 455 O GLU E 309 SHEET 5 H 5 THR E 250 ARG E 255 -1 N ARG E 255 O MET E 450 SHEET 1 I 2 GLY E 328 VAL E 331 0 SHEET 2 I 2 ILE E 340 ASN E 343 -1 N ASN E 343 O GLY E 328 SHEET 1 J 7 GLY F 165 ILE F 169 0 SHEET 2 J 7 PHE F 178 ILE F 184 -1 N CYS F 182 O GLY F 165 SHEET 3 J 7 GLY F 190 ARG F 197 -1 N VAL F 193 O TYR F 181 SHEET 4 J 7 LYS F 381 PRO F 388 -1 N ILE F 386 O THR F 192 SHEET 5 J 7 TYR F 244 GLU F 251 -1 N GLU F 251 O LYS F 381 SHEET 6 J 7 THR F 257 ALA F 263 -1 N TYR F 262 O LEU F 246 SHEET 7 J 7 TYR F 280 GLY F 283 -1 N GLY F 283 O ASP F 261 SSBOND 1 CYS A 161 CYS C 135 1555 1555 2.07 SSBOND 2 CYS A 165 CYS B 193 1555 1555 2.11 SSBOND 3 CYS B 197 CYS C 139 1555 1555 2.08 SSBOND 4 CYS B 201 CYS B 286 1555 1555 2.09 SSBOND 5 CYS B 211 CYS B 240 1555 1555 1.98 SSBOND 6 CYS B 394 CYS B 407 1555 1555 2.06 SSBOND 7 CYS C 153 CYS C 182 1555 1555 2.07 SSBOND 8 CYS C 326 CYS C 339 1555 1555 2.11 SSBOND 9 CYS D 161 CYS F 135 1555 1555 2.05 SSBOND 10 CYS D 165 CYS E 193 1555 1555 2.15 SSBOND 11 CYS E 197 CYS F 139 1555 1555 2.08 SSBOND 12 CYS E 201 CYS E 286 1555 1555 2.09 SSBOND 13 CYS E 211 CYS E 240 1555 1555 2.07 SSBOND 14 CYS E 394 CYS E 407 1555 1555 2.17 SSBOND 15 CYS F 153 CYS F 182 1555 1555 2.06 SSBOND 16 CYS F 326 CYS F 339 1555 1555 2.09 LINK ND2 ASN B 364 C1 NAG K 1 1555 1555 1.40 LINK ND2 ASN B 364 O5 NAG K 1 1555 1555 1.98 LINK ND2 ASN E 364 C1 NAG E 470 1555 1555 1.52 LINK O4 NAG K 1 C1 NAG K 2 1555 1555 1.85 LINK CA CA B 2 OD2 ASP B 381 1555 1555 2.39 LINK CA CA B 2 OD1 ASP B 381 1555 1555 2.78 LINK CA CA B 2 OD1 ASP B 383 1555 1555 2.56 LINK CA CA B 2 O TRP B 385 1555 1555 2.35 LINK CA CA B 2 O HOH B 570 1555 1555 2.57 LINK CA CA B 2 O HOH B 595 1555 1555 2.33 LINK CA CA C 1 OD2 ASP C 318 1555 1555 2.35 LINK CA CA C 1 OD1 ASP C 318 1555 1555 2.58 LINK CA CA C 1 OD1 ASP C 320 1555 1555 2.31 LINK CA CA C 1 O PHE C 322 1555 1555 2.60 LINK CA CA C 1 O GLY C 324 1555 1555 2.35 LINK CA CA E 2 OD2 ASP E 381 1555 1555 2.52 LINK CA CA E 2 OD1 ASP E 381 1555 1555 3.12 LINK CA CA E 2 OD1 ASP E 383 1555 1555 2.74 LINK CA CA E 2 O TRP E 385 1555 1555 2.53 LINK CA CA E 2 O HOH E 475 1555 1555 2.57 LINK CA CA E 2 O HOH E 517 1555 1555 3.05 LINK CA CA F 1 OD1 ASP F 318 1555 1555 2.93 LINK CA CA F 1 OD2 ASP F 318 1555 1555 2.41 LINK CA CA F 1 OD1 ASP F 320 1555 1555 2.48 LINK CA CA F 1 OD2 ASP F 320 1555 1555 3.38 LINK CA CA F 1 O PHE F 322 1555 1555 2.70 LINK CA CA F 1 O GLY F 324 1555 1555 2.25 LINK CA CA F 1 O HOH F 475 1555 1555 2.72 CISPEP 1 ARG B 406 CYS B 407 0 -15.45 CISPEP 2 LYS C 338 CYS C 339 0 0.91 CISPEP 3 ARG E 406 CYS E 407 0 -14.46 CISPEP 4 LYS F 338 CYS F 339 0 0.80 CRYST1 83.443 95.600 113.641 90.00 90.19 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011984 0.000000 0.000040 0.00000 SCALE2 0.000000 0.010460 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008800 0.00000 MTRIX1 1 0.621384 0.170154 0.764807 -86.14362 1 MTRIX2 1 0.131338 -0.984942 0.112422 -10.04091 1 MTRIX3 1 0.772420 0.030591 -0.634375 211.45219 1 MTRIX1 2 0.619412 0.219806 0.753667 -86.07249 1 MTRIX2 2 0.199076 -0.972604 0.120044 -10.43946 1 MTRIX3 2 0.759406 0.075681 -0.646200 211.43710 1 MTRIX1 3 0.560098 0.299287 0.772475 -87.71590 1 MTRIX2 3 0.264385 -0.948277 0.175702 -14.05416 1 MTRIX3 3 0.785106 0.105820 -0.610255 209.45503 1