PDB Short entry for 1G8I HEADER METAL BINDING PROTEIN 17-NOV-00 1G8I TITLE CRYSTAL STRUCTURE OF HUMAN FREQUENIN (NEURONAL CALCIUM SENSOR 1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEURONAL CALCIUM SENSOR 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: FREQUENIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS CALCIUM BINDING-PROTEIN, EF-HAND, CALCIUM ION, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.BOURNE,J.DANNENBERG,V.POLLMANN,P.MARCHOT,O.PONGS REVDAT 3 09-AUG-23 1G8I 1 REMARK LINK REVDAT 2 24-FEB-09 1G8I 1 VERSN REVDAT 1 09-MAY-01 1G8I 0 JRNL AUTH Y.BOURNE,J.DANNENBERG,V.POLLMANN,P.MARCHOT,O.PONGS JRNL TITL IMMUNOCYTOCHEMICAL LOCALIZATION AND CRYSTAL STRUCTURE OF JRNL TITL 2 HUMAN FREQUENIN (NEURONAL CALCIUM SENSOR 1). JRNL REF J.BIOL.CHEM. V. 276 11949 2001 JRNL REFN ISSN 0021-9258 JRNL PMID 11092894 JRNL DOI 10.1074/JBC.M009373200 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.75 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 847282.850 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 35876 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1081 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5710 REMARK 3 BIN R VALUE (WORKING SET) : 0.2750 REMARK 3 BIN FREE R VALUE : 0.3050 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 199 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.022 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2998 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 77 REMARK 3 SOLVENT ATOMS : 283 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.31000 REMARK 3 B22 (A**2) : -8.65000 REMARK 3 B33 (A**2) : 6.34000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -6.86000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.21 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.28 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.21 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.015 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.040 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.580 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.400 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.320 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.520 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 41.38 REMARK 3 REMARK 3 NCS MODEL : CONSTRAINED REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : LIG.PAR REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : LIG.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1G8I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-NOV-00. REMARK 100 THE DEPOSITION ID IS D_1000012365. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34949 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 6.00000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 34.0000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1BJF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 8K, 0.1 M NACACODYLATE, 0.2 M REMARK 280 NAAC, PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 27.76200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 LYS A 3 REMARK 465 GLY A 133 REMARK 465 ASN A 134 REMARK 465 THR A 135 REMARK 465 VAL A 136 REMARK 465 GLU A 137 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 LEU B 189 REMARK 465 VAL B 190 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 3 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 181 O HOH A 672 2.15 REMARK 500 O HOH A 606 O HOH A 727 2.19 REMARK 500 NH2 ARG A 102 O HOH A 758 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O ALA A 160 OG SER B 6 2655 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 5 -28.57 79.57 REMARK 500 SER A 6 15.80 -55.17 REMARK 500 SER B 4 -16.39 82.47 REMARK 500 ASN B 134 55.39 -115.92 REMARK 500 ALA B 160 50.07 39.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 1PE A 951 REMARK 610 1PE A 952 REMARK 610 1PE B 953 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1597 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 73 OD1 REMARK 620 2 ASN A 75 OD1 86.1 REMARK 620 3 ASP A 77 OD1 82.5 93.3 REMARK 620 4 ARG A 79 O 88.4 170.8 78.6 REMARK 620 5 GLU A 84 OE1 108.6 100.5 162.7 88.2 REMARK 620 6 GLU A 84 OE2 95.5 52.9 146.2 135.2 48.3 REMARK 620 7 HOH A 733 O 158.6 73.5 92.1 110.9 82.0 77.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1598 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 109 OD1 REMARK 620 2 ASP A 111 OD2 82.1 REMARK 620 3 ASP A 113 OD1 89.9 80.9 REMARK 620 4 TYR A 115 O 83.4 158.2 82.9 REMARK 620 5 GLU A 120 OE1 104.4 120.3 155.4 79.1 REMARK 620 6 GLU A 120 OE2 97.5 70.2 148.7 128.0 50.1 REMARK 620 7 HOH A 507 O 163.1 83.6 79.0 107.5 90.6 86.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1599 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 157 OD1 REMARK 620 2 ASN A 159 OD1 84.2 REMARK 620 3 ASP A 161 OD1 84.0 74.0 REMARK 620 4 LYS A 163 O 87.4 152.0 78.5 REMARK 620 5 GLU A 168 OE1 110.7 127.7 153.5 80.2 REMARK 620 6 GLU A 168 OE2 89.7 78.4 152.2 128.3 53.1 REMARK 620 7 HOH A 565 O 158.6 87.4 74.8 90.8 90.0 108.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1596 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 175 O REMARK 620 2 HOH A 501 O 79.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B1595 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 17 O REMARK 620 2 THR B 20 O 84.6 REMARK 620 3 PHE B 22 O 111.0 118.8 REMARK 620 4 HOH B 568 O 86.7 121.2 118.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1600 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 73 OD1 REMARK 620 2 ASN B 75 OD1 86.6 REMARK 620 3 ASP B 77 OD2 83.2 86.9 REMARK 620 4 ARG B 79 O 79.7 158.6 75.2 REMARK 620 5 GLU B 84 OE1 103.4 120.9 151.4 78.6 REMARK 620 6 GLU B 84 OE2 97.3 70.9 157.6 127.0 50.3 REMARK 620 7 HOH B 696 O 165.4 101.5 85.0 88.9 83.1 96.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 109 OD1 REMARK 620 2 ASP B 111 OD1 77.9 REMARK 620 3 ASP B 113 OD1 78.3 75.6 REMARK 620 4 TYR B 115 O 81.3 147.0 75.3 REMARK 620 5 GLU B 120 OE2 100.7 75.8 151.0 133.6 REMARK 620 6 GLU B 120 OE1 109.0 129.7 154.2 81.3 53.9 REMARK 620 7 HOH B 583 O 155.9 80.9 85.4 111.7 85.1 93.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 157 OD1 REMARK 620 2 ASN B 159 OD1 87.4 REMARK 620 3 ASP B 161 OD1 81.4 84.6 REMARK 620 4 LYS B 163 O 89.6 165.8 81.1 REMARK 620 5 GLU B 168 OE1 119.9 107.2 155.3 86.4 REMARK 620 6 GLU B 168 OE2 85.5 68.2 150.3 125.4 51.5 REMARK 620 7 HOH B 701 O 164.1 83.5 84.7 96.1 75.5 103.1 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 1595 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1596 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1597 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1598 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1599 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 951 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 952 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 953 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P6G A 954 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 902 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1REC RELATED DB: PDB REMARK 900 RELATED ID: 1BJF RELATED DB: PDB DBREF 1G8I A 1 190 UNP P62166 NCS1_HUMAN 1 190 DBREF 1G8I B 1 190 UNP P62166 NCS1_HUMAN 1 190 SEQRES 1 A 190 MET GLY LYS SER ASN SER LYS LEU LYS PRO GLU VAL VAL SEQRES 2 A 190 GLU GLU LEU THR ARG LYS THR TYR PHE THR GLU LYS GLU SEQRES 3 A 190 VAL GLN GLN TRP TYR LYS GLY PHE ILE LYS ASP CYS PRO SEQRES 4 A 190 SER GLY GLN LEU ASP ALA ALA GLY PHE GLN LYS ILE TYR SEQRES 5 A 190 LYS GLN PHE PHE PRO PHE GLY ASP PRO THR LYS PHE ALA SEQRES 6 A 190 THR PHE VAL PHE ASN VAL PHE ASP GLU ASN LYS ASP GLY SEQRES 7 A 190 ARG ILE GLU PHE SER GLU PHE ILE GLN ALA LEU SER VAL SEQRES 8 A 190 THR SER ARG GLY THR LEU ASP GLU LYS LEU ARG TRP ALA SEQRES 9 A 190 PHE LYS LEU TYR ASP LEU ASP ASN ASP GLY TYR ILE THR SEQRES 10 A 190 ARG ASN GLU MET LEU ASP ILE VAL ASP ALA ILE TYR GLN SEQRES 11 A 190 MET VAL GLY ASN THR VAL GLU LEU PRO GLU GLU GLU ASN SEQRES 12 A 190 THR PRO GLU LYS ARG VAL ASP ARG ILE PHE ALA MET MET SEQRES 13 A 190 ASP LYS ASN ALA ASP GLY LYS LEU THR LEU GLN GLU PHE SEQRES 14 A 190 GLN GLU GLY SER LYS ALA ASP PRO SER ILE VAL GLN ALA SEQRES 15 A 190 LEU SER LEU TYR ASP GLY LEU VAL SEQRES 1 B 190 MET GLY LYS SER ASN SER LYS LEU LYS PRO GLU VAL VAL SEQRES 2 B 190 GLU GLU LEU THR ARG LYS THR TYR PHE THR GLU LYS GLU SEQRES 3 B 190 VAL GLN GLN TRP TYR LYS GLY PHE ILE LYS ASP CYS PRO SEQRES 4 B 190 SER GLY GLN LEU ASP ALA ALA GLY PHE GLN LYS ILE TYR SEQRES 5 B 190 LYS GLN PHE PHE PRO PHE GLY ASP PRO THR LYS PHE ALA SEQRES 6 B 190 THR PHE VAL PHE ASN VAL PHE ASP GLU ASN LYS ASP GLY SEQRES 7 B 190 ARG ILE GLU PHE SER GLU PHE ILE GLN ALA LEU SER VAL SEQRES 8 B 190 THR SER ARG GLY THR LEU ASP GLU LYS LEU ARG TRP ALA SEQRES 9 B 190 PHE LYS LEU TYR ASP LEU ASP ASN ASP GLY TYR ILE THR SEQRES 10 B 190 ARG ASN GLU MET LEU ASP ILE VAL ASP ALA ILE TYR GLN SEQRES 11 B 190 MET VAL GLY ASN THR VAL GLU LEU PRO GLU GLU GLU ASN SEQRES 12 B 190 THR PRO GLU LYS ARG VAL ASP ARG ILE PHE ALA MET MET SEQRES 13 B 190 ASP LYS ASN ALA ASP GLY LYS LEU THR LEU GLN GLU PHE SEQRES 14 B 190 GLN GLU GLY SER LYS ALA ASP PRO SER ILE VAL GLN ALA SEQRES 15 B 190 LEU SER LEU TYR ASP GLY LEU VAL HET NA A1596 1 HET CA A1597 1 HET CA A1598 1 HET CA A1599 1 HET 1PE A 951 14 HET 1PE A 952 14 HET P6G A 954 19 HET EDO A 901 4 HET NA B1595 1 HET CA B1600 1 HET CA B1601 1 HET CA B1602 1 HET 1PE B 953 14 HET EDO B 902 4 HETNAM NA SODIUM ION HETNAM CA CALCIUM ION HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM P6G HEXAETHYLENE GLYCOL HETNAM EDO 1,2-ETHANEDIOL HETSYN 1PE PEG400 HETSYN P6G POLYETHYLENE GLYCOL PEG400 HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NA 2(NA 1+) FORMUL 4 CA 6(CA 2+) FORMUL 7 1PE 3(C10 H22 O6) FORMUL 9 P6G C12 H26 O7 FORMUL 10 EDO 2(C2 H6 O2) FORMUL 17 HOH *283(H2 O) HELIX 1 1 LYS A 9 LYS A 19 1 11 HELIX 2 2 THR A 23 CYS A 38 1 16 HELIX 3 3 ALA A 45 PHE A 56 1 12 HELIX 4 4 PRO A 61 ASP A 73 1 13 HELIX 5 5 PHE A 82 GLY A 95 1 14 HELIX 6 6 THR A 96 ASP A 109 1 14 HELIX 7 7 ARG A 118 VAL A 132 1 15 HELIX 8 8 PRO A 139 ASN A 143 5 5 HELIX 9 9 THR A 144 ASP A 157 1 14 HELIX 10 10 LEU A 166 ASP A 176 1 11 HELIX 11 11 ASP A 176 SER A 184 1 9 HELIX 12 12 LYS B 9 LYS B 19 1 11 HELIX 13 13 THR B 23 CYS B 38 1 16 HELIX 14 14 ASP B 44 PHE B 56 1 13 HELIX 15 15 PRO B 61 ASP B 73 1 13 HELIX 16 16 PHE B 82 GLY B 95 1 14 HELIX 17 17 THR B 96 ASP B 109 1 14 HELIX 18 18 ARG B 118 GLY B 133 1 16 HELIX 19 19 PRO B 139 ASN B 143 5 5 HELIX 20 20 THR B 144 ASP B 157 1 14 HELIX 21 21 THR B 165 ASP B 176 1 12 HELIX 22 22 ASP B 176 SER B 184 1 9 SHEET 1 A 2 GLN A 42 ASP A 44 0 SHEET 2 A 2 ARG A 79 GLU A 81 -1 N ILE A 80 O LEU A 43 SHEET 1 B 2 TYR A 115 THR A 117 0 SHEET 2 B 2 LYS A 163 THR A 165 -1 O LEU A 164 N ILE A 116 SHEET 1 C 2 GLN B 42 LEU B 43 0 SHEET 2 C 2 ILE B 80 GLU B 81 -1 N ILE B 80 O LEU B 43 SHEET 1 D 2 ILE B 116 THR B 117 0 SHEET 2 D 2 LYS B 163 LEU B 164 -1 O LEU B 164 N ILE B 116 LINK OD1 ASP A 73 CA CA A1597 1555 1555 2.17 LINK OD1 ASN A 75 CA CA A1597 1555 1555 1.84 LINK OD1 ASP A 77 CA CA A1597 1555 1555 2.43 LINK O ARG A 79 CA CA A1597 1555 1555 2.03 LINK OE1 GLU A 84 CA CA A1597 1555 1555 2.49 LINK OE2 GLU A 84 CA CA A1597 1555 1555 2.82 LINK OD1 ASP A 109 CA CA A1598 1555 1555 2.24 LINK OD2 ASP A 111 CA CA A1598 1555 1555 2.41 LINK OD1 ASP A 113 CA CA A1598 1555 1555 2.20 LINK O TYR A 115 CA CA A1598 1555 1555 2.32 LINK OE1 GLU A 120 CA CA A1598 1555 1555 2.49 LINK OE2 GLU A 120 CA CA A1598 1555 1555 2.64 LINK OD1 ASP A 157 CA CA A1599 1555 1555 2.24 LINK OD1 ASN A 159 CA CA A1599 1555 1555 2.39 LINK OD1 ASP A 161 CA CA A1599 1555 1555 2.45 LINK O LYS A 163 CA CA A1599 1555 1555 2.30 LINK OE1 GLU A 168 CA CA A1599 1555 1555 2.33 LINK OE2 GLU A 168 CA CA A1599 1555 1555 2.53 LINK O ALA A 175 NA NA A1596 1555 1555 2.53 LINK O HOH A 501 NA NA A1596 1555 1555 2.44 LINK O HOH A 507 CA CA A1598 1555 1555 2.31 LINK O HOH A 565 CA CA A1599 1555 1555 2.44 LINK O HOH A 733 CA CA A1597 1555 1555 2.34 LINK O THR B 17 NA NA B1595 1555 1555 2.28 LINK O THR B 20 NA NA B1595 1555 1555 2.33 LINK O PHE B 22 NA NA B1595 1555 1555 2.29 LINK OD1 ASP B 73 CA CA B1600 1555 1555 2.18 LINK OD1 ASN B 75 CA CA B1600 1555 1555 2.17 LINK OD2 ASP B 77 CA CA B1600 1555 1555 2.52 LINK O ARG B 79 CA CA B1600 1555 1555 2.06 LINK OE1 GLU B 84 CA CA B1600 1555 1555 2.60 LINK OE2 GLU B 84 CA CA B1600 1555 1555 2.55 LINK OD1 ASP B 109 CA CA B1601 1555 1555 2.45 LINK OD1 ASP B 111 CA CA B1601 1555 1555 2.42 LINK OD1 ASP B 113 CA CA B1601 1555 1555 2.03 LINK O TYR B 115 CA CA B1601 1555 1555 2.41 LINK OE2 GLU B 120 CA CA B1601 1555 1555 2.37 LINK OE1 GLU B 120 CA CA B1601 1555 1555 2.47 LINK OD1 ASP B 157 CA CA B1602 1555 1555 2.34 LINK OD1 ASN B 159 CA CA B1602 1555 1555 2.34 LINK OD1 ASP B 161 CA CA B1602 1555 1555 2.40 LINK O LYS B 163 CA CA B1602 1555 1555 2.31 LINK OE1 GLU B 168 CA CA B1602 1555 1555 2.44 LINK OE2 GLU B 168 CA CA B1602 1555 1555 2.61 LINK O HOH B 568 NA NA B1595 1555 1555 2.31 LINK O HOH B 583 CA CA B1601 1555 1555 2.41 LINK O HOH B 696 CA CA B1600 1555 1555 2.52 LINK O HOH B 701 CA CA B1602 1555 1555 2.48 SITE 1 AC1 4 THR B 17 THR B 20 PHE B 22 HOH B 568 SITE 1 AC2 2 ALA A 175 HOH A 501 SITE 1 AC3 6 ASP A 73 ASN A 75 ASP A 77 ARG A 79 SITE 2 AC3 6 GLU A 84 HOH A 733 SITE 1 AC4 6 ASP A 109 ASP A 111 ASP A 113 TYR A 115 SITE 2 AC4 6 GLU A 120 HOH A 507 SITE 1 AC5 6 ASP A 157 ASN A 159 ASP A 161 LYS A 163 SITE 2 AC5 6 GLU A 168 HOH A 565 SITE 1 AC6 6 ASP B 73 ASN B 75 ASP B 77 ARG B 79 SITE 2 AC6 6 GLU B 84 HOH B 696 SITE 1 AC7 6 ASP B 109 ASP B 111 ASP B 113 TYR B 115 SITE 2 AC7 6 GLU B 120 HOH B 583 SITE 1 AC8 6 ASP B 157 ASN B 159 ASP B 161 LYS B 163 SITE 2 AC8 6 GLU B 168 HOH B 701 SITE 1 AC9 10 TYR A 108 VAL A 125 ARG A 148 PHE A 169 SITE 2 AC9 10 SER A 173 ILE A 179 LEU A 183 HOH A 676 SITE 3 AC9 10 HOH A 735 1PE A 952 SITE 1 BC1 5 THR A 92 TRP A 103 HOH A 676 HOH A 710 SITE 2 BC1 5 1PE A 951 SITE 1 BC2 8 TYR B 108 ARG B 148 PHE B 169 SER B 173 SITE 2 BC2 8 ILE B 179 LEU B 183 HOH B 627 HOH B 737 SITE 1 BC3 7 TRP A 30 PHE A 85 LEU A 89 SER A 93 SITE 2 BC3 7 ARG A 94 ASP A 187 HOH A 755 SITE 1 BC4 3 GLU A 26 TYR A 186 HOH A 541 SITE 1 BC5 4 PHE B 22 TRP B 30 SER B 93 ASP B 187 CRYST1 53.811 55.524 77.705 90.00 94.25 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018584 0.000000 0.001382 0.00000 SCALE2 0.000000 0.018010 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012905 0.00000