PDB Short entry for 1GO5 HEADER NUCLEAR TRANSPORT 18-OCT-01 1GO5 TITLE STRUCTURE OF THE C-TERMINAL FG-BINDING DOMAIN OF HUMAN TAP COMPND MOL_ID: 1; COMPND 2 MOLECULE: TIP ASSOCIATING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 551-619; COMPND 5 SYNONYM: TAP, NUCLEAR RNA EXPORT FACTOR 1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PMW172 KEYWDS NUCLEAR TRANSPORT, MRNA EXPORT, UBA, NUCLEOPORINS EXPDTA SOLUTION NMR NUMMDL 26 AUTHOR R.P.GRANT,E.HURT,D.NEUHAUS,M.STEWART REVDAT 4 15-JAN-20 1GO5 1 REMARK REVDAT 3 24-FEB-09 1GO5 1 VERSN REVDAT 2 28-MAR-02 1GO5 1 JRNL REVDAT 1 05-FEB-02 1GO5 0 JRNL AUTH R.P.GRANT,E.HURT,D.NEUHAUS,M.STEWART JRNL TITL STRUCTURE OF THE C-TERMINAL FG-NUCLEOPORIN BINDING DOMAIN OF JRNL TITL 2 TAP/NXF1 JRNL REF NAT.STRUCT.BIOL. V. 9 247 2002 JRNL REFN ISSN 1072-8368 JRNL PMID 11875519 JRNL DOI 10.1038/NSB773 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CAN BE FOUND IN THE JRNL CITATION ABOVE REMARK 4 REMARK 4 1GO5 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-OCT-01. REMARK 100 THE DEPOSITION ID IS D_1290008718. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 0.07 REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY; DQF-COSY; TOCSY; DQ-CORR REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX; DMX; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 26 REMARK 210 CONFORMERS, SELECTION CRITERIA : RESTRAINT VIOLATIONS AND RMSD REMARK 210 PROFILE REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING HOMONUCLEAR NMR REMARK 210 SPECTROSCOPY ON SAMPLES AT NATURAL ISOTOPIC ABUNDANCE REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 8 -170.91 69.44 REMARK 500 1 SER A 9 84.17 -155.72 REMARK 500 1 MET A 21 -67.46 -102.67 REMARK 500 1 LEU A 22 -43.93 -24.46 REMARK 500 1 GLU A 34 -34.70 -143.19 REMARK 500 1 ASN A 44 34.04 82.55 REMARK 500 1 TYR A 47 -21.43 86.50 REMARK 500 1 LYS A 60 -53.58 -133.25 REMARK 500 1 GLU A 62 85.19 -156.03 REMARK 500 1 ALA A 67 -73.73 -67.35 REMARK 500 1 MET A 69 114.03 172.49 REMARK 500 2 THR A 13 132.88 179.14 REMARK 500 2 MET A 21 -67.70 -101.38 REMARK 500 2 LEU A 22 -44.50 -25.15 REMARK 500 2 GLN A 28 -91.05 -41.02 REMARK 500 2 MET A 31 -158.86 -69.68 REMARK 500 2 ASN A 44 33.55 83.78 REMARK 500 2 TYR A 47 -27.27 88.49 REMARK 500 2 LYS A 60 -48.80 -139.28 REMARK 500 2 GLU A 62 34.94 -179.12 REMARK 500 2 PHE A 68 47.07 -83.96 REMARK 500 3 ALA A 3 72.21 61.91 REMARK 500 3 THR A 5 142.20 61.52 REMARK 500 3 SER A 7 113.70 174.19 REMARK 500 3 PRO A 12 -156.38 -56.80 REMARK 500 3 THR A 13 -71.29 82.15 REMARK 500 3 MET A 21 -68.45 -102.09 REMARK 500 3 LEU A 22 -45.46 -21.98 REMARK 500 3 GLN A 28 -82.79 -48.10 REMARK 500 3 GLU A 34 -31.47 -134.57 REMARK 500 3 ASN A 44 34.99 82.45 REMARK 500 3 TYR A 47 -21.14 86.59 REMARK 500 3 LYS A 60 -38.41 -178.21 REMARK 500 3 GLU A 62 26.45 -162.16 REMARK 500 3 PHE A 68 47.24 -84.22 REMARK 500 4 ALA A 3 -60.09 175.63 REMARK 500 4 MET A 21 -67.66 -101.63 REMARK 500 4 LEU A 22 -45.31 -22.88 REMARK 500 4 GLN A 28 -93.26 -40.96 REMARK 500 4 ASN A 44 34.06 83.08 REMARK 500 4 TYR A 47 -28.83 89.41 REMARK 500 4 GLU A 62 -166.17 -70.94 REMARK 500 4 ILE A 63 107.46 49.33 REMARK 500 4 PHE A 68 48.96 -86.86 REMARK 500 4 MET A 69 88.89 48.64 REMARK 500 5 ALA A 3 74.26 57.58 REMARK 500 5 SER A 8 145.80 69.92 REMARK 500 5 SER A 9 75.52 54.79 REMARK 500 5 VAL A 11 94.74 72.97 REMARK 500 5 LEU A 14 -159.83 -101.37 REMARK 500 REMARK 500 THIS ENTRY HAS 337 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FO1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE RNA-BINDING DOMAIN OF THE MRNA EXPORT REMARK 900 FACTOR TAP REMARK 900 RELATED ID: 5364 RELATED DB: BMRB DBREF 1GO5 A 2 70 UNP Q9UBU9 Q9UBU9 551 619 SEQRES 1 A 69 PRO ALA PRO THR PRO SER SER SER PRO VAL PRO THR LEU SEQRES 2 A 69 SER PRO GLU GLN GLN GLU MET LEU GLN ALA PHE SER THR SEQRES 3 A 69 GLN SER GLY MET ASN LEU GLU TRP SER GLN LYS CYS LEU SEQRES 4 A 69 GLN ASP ASN ASN TRP ASP TYR THR ARG SER ALA GLN ALA SEQRES 5 A 69 PHE THR HIS LEU LYS ALA LYS GLY GLU ILE PRO GLU VAL SEQRES 6 A 69 ALA PHE MET LYS HELIX 1 1 PRO A 16 GLY A 30 1 15 HELIX 2 2 GLU A 34 ASN A 43 1 10 HELIX 3 3 THR A 48 ALA A 59 1 12 HELIX 4 4 PRO A 64 MET A 69 1 6 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000