PDB Short entry for 1GZD HEADER ISOMERASE 20-MAY-02 1GZD TITLE CRYSTAL STRUCTURE OF PIG PHOSPHOGLUCOSE ISOMERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSE-6-PHOSPHATE ISOMERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PHOSPHOGLUCOSE ISOMERASE, PGI, PHOSPHOHEXOSE ISOMERASE, PHI; COMPND 5 EC: 5.3.1.9 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 3 ORGANISM_COMMON: PIG; SOURCE 4 ORGANISM_TAXID: 9823; SOURCE 5 TISSUE: MUSCLE KEYWDS ISOMERASE, ALDOSE-KETOSE ISOMERASE, GLYCOLYTIC ENZYME, CYTOKINE, KEYWDS 2 MULTIFUNCTIONAL PROTEIN, GLUCONEOGENESIS, GLYCOLYSIS EXPDTA X-RAY DIFFRACTION AUTHOR C.DAVIES,H.MUIRHEAD REVDAT 6 15-MAY-19 1GZD 1 REMARK REVDAT 5 19-FEB-14 1GZD 1 REMARK REVDAT 4 28-DEC-11 1GZD 1 JRNL REMARK VERSN FORMUL REVDAT 3 24-FEB-09 1GZD 1 VERSN REVDAT 2 31-OCT-02 1GZD 1 JRNL REMARK REVDAT 1 10-JUN-02 1GZD 0 JRNL AUTH C.DAVIES,H.MUIRHEAD JRNL TITL CRYSTAL STRUCTURE OF PHOSPHOGLUCOSE ISOMERASE FROM PIG JRNL TITL 2 MUSCLE AND ITS COMPLEX WITH 5-PHOSPHOARABINONATE JRNL REF PROTEINS V. 49 577 2002 JRNL REFN ISSN 0887-3585 JRNL PMID 12402366 JRNL DOI 10.1002/PROT.10255 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.ACHARI,S.E.MARSHALL,H.MUIRHEAD,R.H.PALMIERI,E.A.NOLTMANN REMARK 1 TITL GLUCOSE 6-PHOSPHATE ISOMERASE REMARK 1 REF PHILOS.TRANS.R.SOC.LONDON V. 293 145 1981 REMARK 1 REFN ISSN 0962-8436 REMARK 1 PMID 6115414 REMARK 1 REFERENCE 2 REMARK 1 AUTH P.J.SHAW,H.MUIRHEAD REMARK 1 TITL CRYSTALLOGRAPHIC STRUCTURE ANALYSIS OF GLUCOSE 6-PHOSPHATE REMARK 1 TITL 2 ISOMERASE AT 3.5 A RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 109 475 1977 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 833853 REMARK 1 DOI 10.1016/S0022-2836(77)80025-9 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0.32 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.8 REMARK 3 NUMBER OF REFLECTIONS : 18598 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2075 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1178 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1770 REMARK 3 BIN FREE R VALUE SET COUNT : 116 REMARK 3 BIN FREE R VALUE : 0.2960 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4422 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 141 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.35000 REMARK 3 B22 (A**2) : -0.35000 REMARK 3 B33 (A**2) : 0.70000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.623 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.309 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.211 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.405 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.876 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4537 ; 0.018 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): 6142 ; 1.809 ; 1.933 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 553 ; 4.110 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 832 ;21.519 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 666 ; 0.127 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3441 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2072 ; 0.249 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 302 ; 0.176 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 113 ; 0.182 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.138 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2752 ; 0.768 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4439 ; 1.490 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1785 ; 2.629 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1703 ; 4.315 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NONE REMARK 4 REMARK 4 1GZD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-MAY-02. REMARK 100 THE DEPOSITION ID IS D_1290009860. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 294.0 REMARK 200 PH : 7.00 REMARK 200 NUMBER OF CRYSTALS USED : 7 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : FILM REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28680 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.180 REMARK 200 RESOLUTION RANGE LOW (A) : 31.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 75.7 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: THE PROTEIN WAS CONCENTRATED TO REMARK 280 10MG/ML AND CRYSTALLIZED AT 4 DEGRESS CELSIUS FROM 10MM SODIUM REMARK 280 PHOSPHATE, PH 7.5 AND 57% SATURATED AMMONIUM SULPHATE., PH 7.00, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.15000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 47.60000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 47.60000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 103.72500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 47.60000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 47.60000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 34.57500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 47.60000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.60000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 103.72500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 47.60000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.60000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 34.57500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 69.15000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -101.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 95.20000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 95.20000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 69.15000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 555 REMARK 465 SER A 556 REMARK 465 GLN A 557 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2011 O HOH A 2131 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 94 CB - CG - OD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG A 103 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ASP A 290 CB - CG - OD2 ANGL. DEV. = 7.5 DEGREES REMARK 500 ASP A 371 CB - CG - OD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 2 -82.52 3.81 REMARK 500 LYS A 56 40.43 -87.48 REMARK 500 LEU A 58 69.87 -66.90 REMARK 500 ASP A 160 -60.82 -131.15 REMARK 500 ALA A 196 0.21 -69.62 REMARK 500 LYS A 233 -6.11 58.90 REMARK 500 THR A 374 -138.89 -116.83 REMARK 500 ALA A 389 -66.01 -129.51 REMARK 500 LYS A 439 115.87 -167.06 REMARK 500 GLN A 511 78.35 -157.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1555 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GZV RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF PHOSPHOGLUCOSE ISOMERASE FROM PIG MUSCLE REMARK 900 COMPLEXED WITH 5-PHOSPHOARABINONATE DBREF 1GZD A 1 557 UNP P08059 G6PI_PIG 1 557 SEQRES 1 A 557 ALA ALA LEU THR GLN ASN PRO GLN PHE LYS LYS LEU GLN SEQRES 2 A 557 THR TRP TYR HIS GLU HIS ARG SER ASP LEU ASN LEU ARG SEQRES 3 A 557 ARG LEU PHE GLU GLY ASP LYS ASP ARG PHE ASN HIS PHE SEQRES 4 A 557 SER LEU ASN LEU ASN THR ASN HIS GLY ARG ILE LEU LEU SEQRES 5 A 557 ASP TYR SER LYS ASN LEU VAL THR GLU ALA VAL MET GLN SEQRES 6 A 557 MET LEU VAL ASP LEU ALA LYS SER ARG GLY VAL GLU ALA SEQRES 7 A 557 ALA ARG GLU ARG MET PHE ASN GLY GLU LYS ILE ASN PHE SEQRES 8 A 557 THR GLU ASP ARG ALA VAL LEU HIS VAL ALA LEU ARG ASN SEQRES 9 A 557 ARG SER ASN THR PRO ILE LEU VAL ASP GLY LYS ASP VAL SEQRES 10 A 557 MET PRO GLU VAL ASN ARG VAL LEU GLU LYS MET LYS SER SEQRES 11 A 557 PHE CYS LYS ARG VAL ARG SER GLY GLU TRP LYS GLY TYR SEQRES 12 A 557 SER GLY LYS SER ILE THR ASP VAL ILE ASN ILE GLY ILE SEQRES 13 A 557 GLY GLY SER ASP LEU GLY PRO LEU MET VAL THR GLU ALA SEQRES 14 A 557 LEU LYS PRO TYR SER ALA GLU GLY PRO ARG VAL TRP PHE SEQRES 15 A 557 VAL SER ASN ILE ASP GLY THR HIS ILE ALA LYS THR LEU SEQRES 16 A 557 ALA THR LEU ASN PRO GLU SER SER LEU PHE ILE ILE ALA SEQRES 17 A 557 SER LYS THR PHE THR THR GLN GLU THR ILE THR ASN ALA SEQRES 18 A 557 GLU THR ALA LYS GLU TRP PHE LEU GLN SER ALA LYS ASP SEQRES 19 A 557 PRO SER ALA VAL ALA LYS HIS PHE VAL ALA LEU SER THR SEQRES 20 A 557 ASN THR THR LYS VAL LYS GLU PHE GLY ILE ASP PRO GLN SEQRES 21 A 557 ASN MET PHE GLU PHE TRP ASP TRP VAL GLY GLY ARG TYR SEQRES 22 A 557 SER LEU TRP SER ALA ILE GLY LEU SER ILE ALA LEU HIS SEQRES 23 A 557 VAL GLY PHE ASP ASN PHE GLU GLN LEU LEU SER GLY ALA SEQRES 24 A 557 HIS TRP MET ASP GLN HIS PHE ARG THR THR PRO LEU GLU SEQRES 25 A 557 LYS ASN ALA PRO VAL LEU LEU ALA LEU LEU GLY ILE TRP SEQRES 26 A 557 TYR ILE ASN PHE PHE GLY CYS GLU THR HIS ALA MET LEU SEQRES 27 A 557 PRO TYR ASP GLN TYR LEU HIS ARG PHE ALA ALA TYR PHE SEQRES 28 A 557 GLN GLN GLY ASP MET GLU SER ASN GLY LYS TYR ILE THR SEQRES 29 A 557 LYS SER GLY THR ARG VAL ASP HIS GLN THR GLY PRO ILE SEQRES 30 A 557 VAL TRP GLY GLU PRO GLY THR ASN GLY GLN HIS ALA PHE SEQRES 31 A 557 TYR GLN LEU ILE HIS GLN GLY THR LYS MET ILE PRO CYS SEQRES 32 A 557 ASP PHE LEU ILE PRO VAL GLN THR GLN HIS PRO ILE ARG SEQRES 33 A 557 LYS GLY LEU HIS HIS LYS ILE LEU LEU ALA ASN PHE LEU SEQRES 34 A 557 ALA GLN THR GLU ALA LEU MET LYS GLY LYS SER THR GLU SEQRES 35 A 557 GLU ALA ARG LYS GLU LEU GLN ALA ALA GLY LYS SER PRO SEQRES 36 A 557 GLU ASP PHE GLU LYS LEU LEU PRO HIS LYS VAL PHE GLU SEQRES 37 A 557 GLY ASN ARG PRO THR ASN SER ILE VAL PHE THR LYS LEU SEQRES 38 A 557 THR PRO PHE ILE LEU GLY ALA LEU ILE ALA MET TYR GLU SEQRES 39 A 557 HIS LYS ILE PHE VAL GLN GLY VAL ILE TRP ASP ILE ASN SEQRES 40 A 557 SER PHE ASP GLN TRP GLY VAL GLU LEU GLY LYS GLN LEU SEQRES 41 A 557 ALA LYS LYS ILE GLU PRO GLU LEU ASP GLY SER SER PRO SEQRES 42 A 557 VAL THR SER HIS ASP SER SER THR ASN GLY LEU ILE ASN SEQRES 43 A 557 PHE ILE LYS GLN GLU ARG GLU ALA ARG SER GLN HET SO4 A1555 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 O4 S 2- FORMUL 3 HOH *141(H2 O) HELIX 1 1 ALA A 1 GLN A 5 5 5 HELIX 2 2 ASN A 6 ARG A 20 1 15 HELIX 3 3 SER A 21 LEU A 23 5 3 HELIX 4 4 ASN A 24 ASP A 32 1 9 HELIX 5 5 ASP A 34 PHE A 39 1 6 HELIX 6 6 THR A 60 ARG A 74 1 15 HELIX 7 7 GLY A 75 GLY A 86 1 12 HELIX 8 8 LEU A 98 ARG A 103 1 6 HELIX 9 9 VAL A 117 GLY A 138 1 22 HELIX 10 10 GLY A 157 LEU A 170 1 14 HELIX 11 11 LYS A 171 ALA A 175 5 5 HELIX 12 12 ASP A 187 ALA A 196 1 10 HELIX 13 13 ASN A 199 GLU A 201 5 3 HELIX 14 14 THR A 214 LYS A 233 1 20 HELIX 15 15 ASP A 234 LYS A 240 5 7 HELIX 16 16 ASN A 248 PHE A 255 1 8 HELIX 17 17 ASP A 258 GLN A 260 5 3 HELIX 18 18 GLY A 270 SER A 274 5 5 HELIX 19 19 SER A 277 ILE A 279 5 3 HELIX 20 20 GLY A 280 GLY A 288 1 9 HELIX 21 21 GLY A 288 THR A 309 1 22 HELIX 22 22 PRO A 310 LYS A 313 5 4 HELIX 23 23 ASN A 314 PHE A 329 1 16 HELIX 24 24 ASP A 341 HIS A 345 5 5 HELIX 25 25 ARG A 346 GLY A 360 1 15 HELIX 26 26 THR A 384 ALA A 389 5 6 HELIX 27 27 PHE A 390 GLY A 397 1 8 HELIX 28 28 PRO A 414 GLY A 438 1 25 HELIX 29 29 SER A 440 ALA A 451 1 12 HELIX 30 30 SER A 454 GLU A 459 1 6 HELIX 31 31 LEU A 461 VAL A 466 5 6 HELIX 32 32 THR A 482 ASP A 505 1 24 HELIX 33 33 GLN A 511 GLY A 513 5 3 HELIX 34 34 VAL A 514 LEU A 528 1 15 HELIX 35 35 ASP A 538 ALA A 554 1 17 SHEET 1 AA 6 SER A 40 ASN A 44 0 SHEET 2 AA 6 ARG A 49 ASP A 53 -1 O ILE A 50 N LEU A 43 SHEET 3 AA 6 THR A 473 LYS A 480 -1 O SER A 475 N ASP A 53 SHEET 4 AA 6 CYS A 403 GLN A 410 1 O CYS A 403 N ASN A 474 SHEET 5 AA 6 THR A 334 PRO A 339 1 O ALA A 336 N ASP A 404 SHEET 6 AA 6 ILE A 377 TRP A 379 1 O ILE A 377 N HIS A 335 SHEET 1 AB 2 LEU A 111 VAL A 112 0 SHEET 2 AB 2 LYS A 115 ASP A 116 -1 O LYS A 115 N VAL A 112 SHEET 1 AC 5 ARG A 179 VAL A 183 0 SHEET 2 AC 5 ASP A 150 ILE A 154 1 O VAL A 151 N TRP A 181 SHEET 3 AC 5 SER A 203 ALA A 208 1 O LEU A 204 N ILE A 152 SHEET 4 AC 5 PHE A 242 SER A 246 1 O VAL A 243 N ILE A 207 SHEET 5 AC 5 MET A 262 GLU A 264 1 O PHE A 263 N SER A 246 CISPEP 1 GLY A 383 THR A 384 0 2.25 SITE 1 AC1 6 SER A 159 SER A 209 LYS A 210 THR A 211 SITE 2 AC1 6 THR A 214 HOH A2056 CRYST1 95.200 95.200 138.300 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010504 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010504 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007231 0.00000