PDB Short entry for 1H16 HEADER TRANSFERASE 03-JUL-02 1H16 TITLE PYRUVATE FORMATE-LYASE (E.COLI) IN COMPLEX WITH PYRUVATE AND COA COMPND MOL_ID: 1; COMPND 2 MOLECULE: FORMATE ACETYLTRANSFERASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PYRUVATE FORMATE-LYASE; COMPND 5 EC: 2.3.1.54; COMPND 6 OTHER_DETAILS: COMPLEX OF PYRUVATE FORMATE-LYASE WITH ITS SUBSTRATES COMPND 7 PYRUVATE AND COA SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562 KEYWDS LYASE, GLYCYL RADICAL ENZYME, TRANSFERASE, ACYLTRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.BECKER,W.KABSCH REVDAT 6 13-DEC-23 1H16 1 REMARK REVDAT 5 15-NOV-23 1H16 1 REMARK LINK ATOM REVDAT 4 24-JUL-19 1H16 1 REMARK REVDAT 3 10-JUN-15 1H16 1 KEYWDS JRNL REMARK VERSN REVDAT 3 2 1 HETNAM FORMUL LINK SCALE3 REVDAT 3 3 1 CONECT MASTER REVDAT 2 24-FEB-09 1H16 1 VERSN REVDAT 1 01-NOV-02 1H16 0 JRNL AUTH A.BECKER,W.KABSCH JRNL TITL X-RAY STRUCTURE OF PYRUVATE FORMATE-LYASE IN COMPLEX WITH JRNL TITL 2 PYRUVATE AND COA.HOW THE ENZYME USES THE CYS-418 THIYL JRNL TITL 3 RADICAL FOR PYRUVATE CLEAVAGE JRNL REF J.BIOL.CHEM. V. 277 40036 2002 JRNL REFN ISSN 0021-9258 JRNL PMID 12163496 JRNL DOI 10.1074/JBC.M205821200 REMARK 2 REMARK 2 RESOLUTION. 1.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 5042753.840 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 128782 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.163 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2576 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.53 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.63 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 19479 REMARK 3 BIN R VALUE (WORKING SET) : 0.2040 REMARK 3 BIN FREE R VALUE : 0.2230 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 2.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 398 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.011 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5988 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 117 REMARK 3 SOLVENT ATOMS : 1267 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.23000 REMARK 3 B22 (A**2) : -0.26000 REMARK 3 B33 (A**2) : 0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.12 REMARK 3 ESD FROM SIGMAA (A) : 0.11 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.14 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.13 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.020 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.930 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.340 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.690 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.480 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 52.68 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP_1.8.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : COAACO.PAR REMARK 3 PARAMETER FILE 4 : PYR_XPLOR+DTR+LTR+PEG1.PAR REMARK 3 PARAMETER FILE 5 : ION.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : COAACO.TOP REMARK 3 TOPOLOGY FILE 4 : PYR_XPLOR+DTR+LTR+PEG1.TOP REMARK 3 TOPOLOGY FILE 5 : ION.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ELECTRON DENSITY NEAR PHOSPHATES OF COA REMARK 3 WAS EXPLAINED AS MG2+ ALTHOUGH NO DIVALENT CATIONS WERE INCLUDED REMARK 3 IN THE CRYSTALLIZATION BUFFER REMARK 4 REMARK 4 1H16 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-JUL-02. REMARK 100 THE DEPOSITION ID IS D_1290011061. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.30 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X13 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8045 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 128878 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.530 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 8.600 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 28.9300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.39 REMARK 200 R MERGE FOR SHELL (I) : 0.18300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 7.520 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 3PFL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.30 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 102.97500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 102.97500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 27.45000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 76.52500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 27.45000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 76.52500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 102.97500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 27.45000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 76.52500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 102.97500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 27.45000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 76.52500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -153.05000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2226 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2502 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2594 LIES ON A SPECIAL POSITION. REMARK 375 HOH A3228 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 GLUCOSE NONOXIDATIVE CONVERSION METABOLISM PATHWAY. REMARK 400 ACETYL-COA + FORMATE = COA + PYRUVATE. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SD MET A 479 O HOH A 2872 2.12 REMARK 500 O HOH A 2140 O HOH A 3254 2.14 REMARK 500 O HOH A 2138 O HOH A 2140 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLN A 757 OE1 GLN A 757 3854 1.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 66 CD ARG A 66 NE 0.209 REMARK 500 ARG A 66 NE ARG A 66 CZ 2.079 REMARK 500 ARG A 66 NE ARG A 66 CZ 2.585 REMARK 500 ARG A 66 CZ ARG A 66 NH2 2.601 REMARK 500 ARG A 66 CZ ARG A 66 NH2 4.234 REMARK 500 ARG A 66 CZ ARG A 66 NH2 1.721 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 66 CD - NE - CZ ANGL. DEV. = -82.1 DEGREES REMARK 500 ARG A 66 CD - NE - CZ ANGL. DEV. = 100.3 DEGREES REMARK 500 ARG A 66 NH1 - CZ - NH2 ANGL. DEV. = -93.8 DEGREES REMARK 500 ARG A 66 NH1 - CZ - NH2 ANGL. DEV. = -48.8 DEGREES REMARK 500 ARG A 66 NH1 - CZ - NH2 ANGL. DEV. = 50.5 DEGREES REMARK 500 ARG A 66 NE - CZ - NH1 ANGL. DEV. = -44.5 DEGREES REMARK 500 ARG A 66 NE - CZ - NH1 ANGL. DEV. = -18.1 DEGREES REMARK 500 ARG A 66 NE - CZ - NH2 ANGL. DEV. = -15.0 DEGREES REMARK 500 ARG A 66 NE - CZ - NH2 ANGL. DEV. = 109.7 DEGREES REMARK 500 ARG A 66 NE - CZ - NH2 ANGL. DEV. = -52.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 2 92.01 164.73 REMARK 500 ASN A 4 -179.19 -65.80 REMARK 500 ASN A 24 81.65 -156.23 REMARK 500 ASN A 90 97.31 -162.73 REMARK 500 THR A 101 -158.98 -116.61 REMARK 500 ALA A 171 20.87 -145.57 REMARK 500 CYS A 418 -109.88 58.54 REMARK 500 VAL A 420 15.71 -140.69 REMARK 500 ALA A 434 -135.51 54.74 REMARK 500 SER A 505 53.23 -148.57 REMARK 500 ALA A 542 -167.71 -125.99 REMARK 500 GLU A 550 -2.56 -58.97 REMARK 500 ILE A 606 -139.05 51.47 REMARK 500 SER A 733 -0.07 -175.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 66 0.27 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2014 DISTANCE = 6.12 ANGSTROMS REMARK 525 HOH A2021 DISTANCE = 6.34 ANGSTROMS REMARK 525 HOH A2091 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A2197 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH A2198 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH A2218 DISTANCE = 6.37 ANGSTROMS REMARK 525 HOH A2276 DISTANCE = 6.16 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A9006 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 62 NZ REMARK 620 2 HOH A2101 O 116.0 REMARK 620 3 HOH A2253 O 77.9 54.6 REMARK 620 4 HOH A2258 O 58.9 81.4 93.0 REMARK 620 5 HOH A3192 O 155.9 74.4 122.8 104.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A9002 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 214 O REMARK 620 2 HOH A2595 O 120.4 REMARK 620 3 HOH A2920 O 103.9 99.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A9005 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 589 O REMARK 620 2 HOH A2558 O 136.0 REMARK 620 3 HOH A3027 O 82.2 141.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A9001 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 652 O REMARK 620 2 LEU A 654 O 92.1 REMARK 620 3 GLU A 700 OE1 157.7 95.9 REMARK 620 4 GLY A 701 O 87.2 143.1 98.6 REMARK 620 5 HOH A3157 O 79.2 90.0 80.0 125.8 REMARK 620 6 HOH A3160 O 117.4 83.7 84.2 64.4 162.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A9008 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 COA A1000 O3A REMARK 620 2 COA A1000 O5A 58.9 REMARK 620 3 COA A1000 O5B 56.5 114.8 REMARK 620 4 HOH A2498 O 128.1 119.6 93.5 REMARK 620 5 HOH A3250 O 109.1 88.0 120.7 122.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A9003 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2138 O REMARK 620 2 HOH A2140 O 46.2 REMARK 620 3 HOH A2327 O 61.4 83.4 REMARK 620 4 HOH A2330 O 97.3 66.8 150.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A9007 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2138 O REMARK 620 2 HOH A2689 O 77.9 REMARK 620 3 HOH A2933 O 99.3 36.1 REMARK 620 4 HOH A3256 O 138.5 115.1 79.8 REMARK 620 5 HOH A3257 O 63.6 84.0 68.3 78.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A9004 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2624 O REMARK 620 2 HOH A3136 O 86.9 REMARK 620 3 PG4 A9013 O4 100.9 171.3 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 9001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 9002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 9003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 9004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 9005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 9006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 9007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 9008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA A 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTL A 9009 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTL A 9010 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 9011 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 9012 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 9013 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1CM5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF C418A,C419A MUTANT OF PFL FROM E.COLI REMARK 900 RELATED ID: 1H17 RELATED DB: PDB REMARK 900 PYRUVATE FORMATE-LYASE (E.COLI) IN COMPLEX WITH COA AND THE REMARK 900 SUBSTRATE ANALOG OXAMATE REMARK 900 RELATED ID: 1H18 RELATED DB: PDB REMARK 900 PYRUVATE FORMATE-LYASE (E.COLI) IN COMPLEX WITH PYRUVATE REMARK 900 RELATED ID: 1QHM RELATED DB: PDB REMARK 900 ESCHERICHIA COLI PYRUVATE FORMATE LYASE LARGE DOMAIN REMARK 900 RELATED ID: 2PFL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PFL FROM E.COLI REMARK 900 RELATED ID: 3PFL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PFL FROM E.COLI IN COMPLEX WITH SUBSTRATE REMARK 900 ANALOGUE OXAMATE DBREF 1H16 A 1 759 UNP P09373 PFLB_ECOLI 1 759 SEQRES 1 A 759 SER GLU LEU ASN GLU LYS LEU ALA THR ALA TRP GLU GLY SEQRES 2 A 759 PHE THR LYS GLY ASP TRP GLN ASN GLU VAL ASN VAL ARG SEQRES 3 A 759 ASP PHE ILE GLN LYS ASN TYR THR PRO TYR GLU GLY ASP SEQRES 4 A 759 GLU SER PHE LEU ALA GLY ALA THR GLU ALA THR THR THR SEQRES 5 A 759 LEU TRP ASP LYS VAL MET GLU GLY VAL LYS LEU GLU ASN SEQRES 6 A 759 ARG THR HIS ALA PRO VAL ASP PHE ASP THR ALA VAL ALA SEQRES 7 A 759 SER THR ILE THR SER HIS ASP ALA GLY TYR ILE ASN LYS SEQRES 8 A 759 GLN LEU GLU LYS ILE VAL GLY LEU GLN THR GLU ALA PRO SEQRES 9 A 759 LEU LYS ARG ALA LEU ILE PRO PHE GLY GLY ILE LYS MET SEQRES 10 A 759 ILE GLU GLY SER CYS LYS ALA TYR ASN ARG GLU LEU ASP SEQRES 11 A 759 PRO MET ILE LYS LYS ILE PHE THR GLU TYR ARG LYS THR SEQRES 12 A 759 HIS ASN GLN GLY VAL PHE ASP VAL TYR THR PRO ASP ILE SEQRES 13 A 759 LEU ARG CYS ARG LYS SER GLY VAL LEU THR GLY LEU PRO SEQRES 14 A 759 ASP ALA TYR GLY ARG GLY ARG ILE ILE GLY ASP TYR ARG SEQRES 15 A 759 ARG VAL ALA LEU TYR GLY ILE ASP TYR LEU MET LYS ASP SEQRES 16 A 759 LYS LEU ALA GLN PHE THR SER LEU GLN ALA ASP LEU GLU SEQRES 17 A 759 ASN GLY VAL ASN LEU GLU GLN THR ILE ARG LEU ARG GLU SEQRES 18 A 759 GLU ILE ALA GLU GLN HIS ARG ALA LEU GLY GLN MET LYS SEQRES 19 A 759 GLU MET ALA ALA LYS TYR GLY TYR ASP ILE SER GLY PRO SEQRES 20 A 759 ALA THR ASN ALA GLN GLU ALA ILE GLN TRP THR TYR PHE SEQRES 21 A 759 GLY TYR LEU ALA ALA VAL LYS SER GLN ASN GLY ALA ALA SEQRES 22 A 759 MET SER PHE GLY ARG THR SER THR PHE LEU ASP VAL TYR SEQRES 23 A 759 ILE GLU ARG ASP LEU LYS ALA GLY LYS ILE THR GLU GLN SEQRES 24 A 759 GLU ALA GLN GLU MET VAL ASP HIS LEU VAL MET LYS LEU SEQRES 25 A 759 ARG MET VAL ARG PHE LEU ARG THR PRO GLU TYR ASP GLU SEQRES 26 A 759 LEU PHE SER GLY ASP PRO ILE TRP ALA THR GLU SER ILE SEQRES 27 A 759 GLY GLY MET GLY LEU ASP GLY ARG THR LEU VAL THR LYS SEQRES 28 A 759 ASN SER PHE ARG PHE LEU ASN THR LEU TYR THR MET GLY SEQRES 29 A 759 PRO SER PRO GLU PRO ASN MET THR ILE LEU TRP SER GLU SEQRES 30 A 759 LYS LEU PRO LEU ASN PHE LYS LYS PHE ALA ALA LYS VAL SEQRES 31 A 759 SER ILE ASP THR SER SER LEU GLN TYR GLU ASN ASP ASP SEQRES 32 A 759 LEU MET ARG PRO ASP PHE ASN ASN ASP ASP TYR ALA ILE SEQRES 33 A 759 ALA CYS CYS VAL SER PRO MET ILE VAL GLY LYS GLN MET SEQRES 34 A 759 GLN PHE PHE GLY ALA ARG ALA ASN LEU ALA LYS THR MET SEQRES 35 A 759 LEU TYR ALA ILE ASN GLY GLY VAL ASP GLU LYS LEU LYS SEQRES 36 A 759 MET GLN VAL GLY PRO LYS SER GLU PRO ILE LYS GLY ASP SEQRES 37 A 759 VAL LEU ASN TYR ASP GLU VAL MET GLU ARG MET ASP HIS SEQRES 38 A 759 PHE MET ASP TRP LEU ALA LYS GLN TYR ILE THR ALA LEU SEQRES 39 A 759 ASN ILE ILE HIS TYR MET HIS ASP LYS TYR SER TYR GLU SEQRES 40 A 759 ALA SER LEU MET ALA LEU HIS ASP ARG ASP VAL ILE ARG SEQRES 41 A 759 THR MET ALA CYS GLY ILE ALA GLY LEU SER VAL ALA ALA SEQRES 42 A 759 ASP SER LEU SER ALA ILE LYS TYR ALA LYS VAL LYS PRO SEQRES 43 A 759 ILE ARG ASP GLU ASP GLY LEU ALA ILE ASP PHE GLU ILE SEQRES 44 A 759 GLU GLY GLU TYR PRO GLN PHE GLY ASN ASN ASP PRO ARG SEQRES 45 A 759 VAL ASP ASP LEU ALA VAL ASP LEU VAL GLU ARG PHE MET SEQRES 46 A 759 LYS LYS ILE GLN LYS LEU HIS THR TYR ARG ASP ALA ILE SEQRES 47 A 759 PRO THR GLN SER VAL LEU THR ILE THR SER ASN VAL VAL SEQRES 48 A 759 TYR GLY LYS LYS THR GLY ASN THR PRO ASP GLY ARG ARG SEQRES 49 A 759 ALA GLY ALA PRO PHE GLY PRO GLY ALA ASN PRO MET HIS SEQRES 50 A 759 GLY ARG ASP GLN LYS GLY ALA VAL ALA SER LEU THR SER SEQRES 51 A 759 VAL ALA LYS LEU PRO PHE ALA TYR ALA LYS ASP GLY ILE SEQRES 52 A 759 SER TYR THR PHE SER ILE VAL PRO ASN ALA LEU GLY LYS SEQRES 53 A 759 ASP ASP GLU VAL ARG LYS THR ASN LEU ALA GLY LEU MET SEQRES 54 A 759 ASP GLY TYR PHE HIS HIS GLU ALA SER ILE GLU GLY GLY SEQRES 55 A 759 GLN HIS LEU ASN VAL ASN VAL MET ASN ARG GLU MET LEU SEQRES 56 A 759 LEU ASP ALA MET GLU ASN PRO GLU LYS TYR PRO GLN LEU SEQRES 57 A 759 THR ILE ARG VAL SER GLY TYR ALA VAL ARG PHE ASN SER SEQRES 58 A 759 LEU THR LYS GLU GLN GLN GLN ASP VAL ILE THR ARG THR SEQRES 59 A 759 PHE THR GLN SER MET HET COA A1000 48 HET PYR A1001 6 HET NA A9001 1 HET NA A9002 1 HET NA A9003 1 HET NA A9004 1 HET NA A9005 1 HET NA A9006 1 HET NA A9007 1 HET MG A9008 1 HET DTL A9009 8 HET DTL A9010 8 HET PG4 A9011 13 HET PG4 A9012 13 HET PG4 A9013 13 HETNAM COA COENZYME A HETNAM PYR PYRUVIC ACID HETNAM NA SODIUM ION HETNAM MG MAGNESIUM ION HETNAM DTL L-TREITOL HETNAM PG4 TETRAETHYLENE GLYCOL FORMUL 2 COA C21 H36 N7 O16 P3 S FORMUL 3 PYR C3 H4 O3 FORMUL 4 NA 7(NA 1+) FORMUL 11 MG MG 2+ FORMUL 12 DTL 2(C4 H10 O4) FORMUL 14 PG4 3(C8 H18 O5) FORMUL 17 HOH *1267(H2 O) HELIX 1 1 ASN A 4 TRP A 11 1 8 HELIX 2 2 GLY A 17 ASN A 21 5 5 HELIX 3 3 ASN A 24 TYR A 33 1 10 HELIX 4 4 ASP A 39 LEU A 43 5 5 HELIX 5 5 THR A 47 HIS A 68 1 22 HELIX 6 6 ILE A 110 GLY A 114 5 5 HELIX 7 7 ILE A 115 TYR A 125 1 11 HELIX 8 8 ASP A 130 TYR A 140 1 11 HELIX 9 9 THR A 143 TYR A 152 1 10 HELIX 10 10 THR A 153 SER A 162 1 10 HELIX 11 11 TYR A 181 GLY A 188 1 8 HELIX 12 12 GLY A 188 SER A 202 1 15 HELIX 13 13 LEU A 203 GLY A 210 1 8 HELIX 14 14 ASN A 212 TYR A 240 1 29 HELIX 15 15 ASN A 250 GLN A 269 1 20 HELIX 16 16 THR A 279 ALA A 293 1 15 HELIX 17 17 THR A 297 ARG A 313 1 17 HELIX 18 18 THR A 320 PHE A 327 1 8 HELIX 19 19 THR A 350 MET A 363 1 14 HELIX 20 20 PRO A 380 SER A 395 1 16 HELIX 21 21 ASP A 402 ASN A 410 1 9 HELIX 22 22 LEU A 438 ASN A 447 1 10 HELIX 23 23 ASN A 471 SER A 505 1 35 HELIX 24 24 GLU A 507 ALA A 512 1 6 HELIX 25 25 GLY A 528 ALA A 542 1 15 HELIX 26 26 ASP A 570 LYS A 590 1 21 HELIX 27 27 THR A 593 ALA A 597 5 5 HELIX 28 28 THR A 607 LYS A 615 1 9 HELIX 29 29 GLY A 643 LYS A 653 1 11 HELIX 30 30 PRO A 655 ALA A 659 5 5 HELIX 31 31 VAL A 670 GLY A 675 1 6 HELIX 32 32 ASP A 677 HIS A 694 1 18 HELIX 33 33 ASN A 711 ASN A 721 1 11 HELIX 34 34 PRO A 722 TYR A 725 5 4 HELIX 35 35 ASN A 740 LEU A 742 5 3 HELIX 36 36 THR A 743 THR A 752 1 10 SHEET 1 AA 2 ASP A 72 ALA A 78 0 SHEET 2 AA 2 LYS A 106 LEU A 109 1 O ARG A 107 N ASP A 74 SHEET 1 AB 5 THR A 335 GLY A 339 0 SHEET 2 AB 5 ASN A 370 TRP A 375 1 O ASN A 370 N GLU A 336 SHEET 3 AB 5 GLN A 398 ASN A 401 1 O GLN A 398 N ILE A 373 SHEET 4 AB 5 HIS A 704 VAL A 709 -1 O LEU A 705 N TYR A 399 SHEET 5 AB 5 THR A 666 ILE A 669 1 O PHE A 667 N ASN A 708 SHEET 1 AC 2 TYR A 414 ALA A 417 0 SHEET 2 AC 2 SER A 421 ILE A 424 -1 O SER A 421 N ALA A 417 SHEET 1 AD 4 GLN A 428 ASN A 437 0 SHEET 2 AD 4 ILE A 519 ALA A 527 1 O ILE A 519 N MET A 429 SHEET 3 AD 4 ILE A 598 VAL A 603 1 O ILE A 598 N MET A 522 SHEET 4 AD 4 GLY A 662 ILE A 663 1 O GLY A 662 N VAL A 603 SHEET 1 AE 2 LYS A 543 ARG A 548 0 SHEET 2 AE 2 ALA A 554 GLU A 560 -1 N ILE A 555 O ILE A 547 SHEET 1 AF 2 THR A 729 ARG A 731 0 SHEET 2 AF 2 ALA A 736 ARG A 738 -1 O VAL A 737 N ILE A 730 LINK NZ LYS A 62 NA NA A9006 1555 1555 3.04 LINK O GLU A 214 NA NA A9002 4545 1555 2.81 LINK O GLN A 589 NA NA A9005 1555 1555 2.61 LINK O ALA A 652 NA NA A9001 1555 1555 2.41 LINK O LEU A 654 NA NA A9001 1555 1555 2.37 LINK OE1 GLU A 700 NA NA A9001 1555 1555 2.32 LINK O GLY A 701 NA NA A9001 1555 1555 2.88 LINK O3A COA A1000 MG MG A9008 1555 1555 2.98 LINK O5A COA A1000 MG MG A9008 1555 1555 2.07 LINK O5B COA A1000 MG MG A9008 1555 1555 2.05 LINK O HOH A2101 NA NA A9006 1555 1555 2.27 LINK O HOH A2138 NA NA A9003 1555 1555 2.05 LINK O HOH A2138 NA NA A9007 4545 1555 2.16 LINK O HOH A2140 NA NA A9003 1555 1555 3.01 LINK O HOH A2253 NA NA A9006 1555 1555 3.18 LINK O HOH A2258 NA NA A9006 1555 1555 2.46 LINK O HOH A2327 NA NA A9003 1555 1555 2.88 LINK O HOH A2330 NA NA A9003 1555 1555 1.96 LINK O HOH A2498 MG MG A9008 1555 1555 2.77 LINK O HOH A2558 NA NA A9005 1555 1555 2.20 LINK O HOH A2595 NA NA A9002 1555 1555 2.09 LINK O HOH A2624 NA NA A9004 1555 1555 2.34 LINK O HOH A2689 NA NA A9007 4545 1555 1.95 LINK O HOH A2920 NA NA A9002 1555 1555 2.09 LINK O HOH A2933 NA NA A9007 4545 1555 2.35 LINK O HOH A3027 NA NA A9005 1555 1555 2.51 LINK O HOH A3136 NA NA A9004 1555 1555 2.36 LINK O HOH A3157 NA NA A9001 1555 1555 2.43 LINK O HOH A3160 NA NA A9001 1555 1555 2.35 LINK O HOH A3192 NA NA A9006 1555 1555 2.31 LINK O HOH A3250 MG MG A9008 1555 1555 2.85 LINK O HOH A3256 NA NA A9007 4545 1555 1.97 LINK O HOH A3257 NA NA A9007 4545 1555 2.20 LINK NA NA A9004 O4 PG4 A9013 1555 1555 2.47 CISPEP 1 GLU A 368 PRO A 369 0 -0.82 SITE 1 AC1 6 ALA A 652 LEU A 654 GLU A 700 GLY A 701 SITE 2 AC1 6 HOH A3157 HOH A3160 SITE 1 AC2 5 GLU A 214 GLN A 215 ARG A 218 HOH A2595 SITE 2 AC2 5 HOH A2920 SITE 1 AC3 7 THR A 80 ILE A 81 SER A 268 HOH A2138 SITE 2 AC3 7 HOH A2140 HOH A2327 HOH A2330 SITE 1 AC4 3 HOH A2624 HOH A3136 PG4 A9013 SITE 1 AC5 4 GLN A 589 PRO A 599 HOH A2558 HOH A3027 SITE 1 AC6 4 LYS A 62 HOH A2101 HOH A2258 HOH A3192 SITE 1 AC7 6 PHE A 112 HOH A2138 HOH A2689 HOH A2933 SITE 2 AC7 6 HOH A3256 HOH A3257 SITE 1 AC8 3 COA A1000 HOH A2498 HOH A3250 SITE 1 AC9 27 LYS A 116 MET A 117 ASN A 145 GLN A 146 SITE 2 AC9 27 PHE A 149 ASP A 150 TYR A 152 ARG A 160 SITE 3 AC9 27 LYS A 161 PHE A 200 HIS A 227 HOH A2498 SITE 4 AC9 27 HOH A2744 HOH A3237 HOH A3238 HOH A3239 SITE 5 AC9 27 HOH A3240 HOH A3241 HOH A3242 HOH A3244 SITE 6 AC9 27 HOH A3245 HOH A3246 HOH A3247 HOH A3248 SITE 7 AC9 27 HOH A3249 HOH A3251 MG A9008 SITE 1 BC1 8 ARG A 176 ALA A 273 CYS A 418 PHE A 432 SITE 2 BC1 8 ARG A 435 LEU A 604 ILE A 606 HOH A3252 SITE 1 BC2 13 THR A 138 GLU A 139 LYS A 142 GLU A 225 SITE 2 BC2 13 ARG A 228 GLN A 232 HOH A2454 HOH A2455 SITE 3 BC2 13 HOH A3253 HOH A3254 HOH A3255 HOH A3256 SITE 4 BC2 13 HOH A3257 SITE 1 BC3 11 HIS A 68 PRO A 70 TYR A 125 ASP A 324 SITE 2 BC3 11 ASP A 330 SER A 741 HOH A2297 HOH A3259 SITE 3 BC3 11 HOH A3260 HOH A3261 HOH A3262 SITE 1 BC4 1 GLU A 40 SITE 1 BC5 6 ALA A 198 GLN A 199 SER A 202 ARG A 516 SITE 2 BC5 6 ASP A 517 HOH A3266 SITE 1 BC6 7 LEU A 648 THR A 649 LEU A 688 GLY A 691 SITE 2 BC6 7 TYR A 692 HOH A3267 NA A9004 CRYST1 54.900 153.050 205.950 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018215 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006534 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004856 0.00000