PDB Short entry for 1HA0 HEADER VIRAL PROTEIN 08-OCT-98 1HA0 TITLE HEMAGGLUTININ PRECURSOR HA0 CAVEAT 1HA0 NAG A 1440 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (HEMAGGLUTININ PRECURSOR); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HA1, HA2; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 11320; SOURCE 4 STRAIN: CV-1; SOURCE 5 EXPRESSION_SYSTEM: VACCINIA VIRUS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 10245; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: VIRUS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: VACCINIA KEYWDS GLYCOPROTEIN, MEMBRANE-FUSION PRECURSOR, VIRUS/VIRAL PROTEIN, VIRAL KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.CHEN,K.HO LEE,D.A.STEINHAUER,D.J.STEVENS,J.J.SKEHEL,D.C.WILEY REVDAT 7 03-NOV-21 1HA0 1 SEQADV HETSYN REVDAT 6 29-JUL-20 1HA0 1 CAVEAT COMPND REMARK SEQADV REVDAT 6 2 1 HETNAM LINK SITE ATOM REVDAT 5 13-JUL-11 1HA0 1 VERSN REVDAT 4 24-FEB-09 1HA0 1 VERSN REVDAT 3 01-APR-03 1HA0 1 JRNL REVDAT 2 22-DEC-99 1HA0 4 HEADER COMPND REMARK JRNL REVDAT 2 2 4 ATOM SOURCE SEQRES REVDAT 1 12-OCT-98 1HA0 0 JRNL AUTH J.CHEN,K.H.LEE,D.A.STEINHAUER,D.J.STEVENS,J.J.SKEHEL, JRNL AUTH 2 D.C.WILEY JRNL TITL STRUCTURE OF THE HEMAGGLUTININ PRECURSOR CLEAVAGE SITE, A JRNL TITL 2 DETERMINANT OF INFLUENZA PATHOGENICITY AND THE ORIGIN OF THE JRNL TITL 3 LABILE CONFORMATION. JRNL REF CELL(CAMBRIDGE,MASS.) V. 95 409 1998 JRNL REFN ISSN 0092-8674 JRNL PMID 9814710 JRNL DOI 10.1016/S0092-8674(00)81771-7 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2950070.130 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 13933 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.302 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 689 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.012 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.97 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2183 REMARK 3 BIN R VALUE (WORKING SET) : 0.3370 REMARK 3 BIN FREE R VALUE : 0.3810 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 96 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.039 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3888 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 145 REMARK 3 SOLVENT ATOMS : 37 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM SIGMAA (A) : 0.34 REMARK 3 LOW RESOLUTION CUTOFF (A) : 8.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.49 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.42 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.390 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 4.350 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 7.020 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 7.870 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 10.640; 2.500 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HA0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB. REMARK 100 THE DEPOSITION ID IS D_1000008096. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14885 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 15.00 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 76.50000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.50000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 76.50000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.50000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 76.50000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 76.50000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 76.50000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 76.50000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 76.50000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 76.50000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 76.50000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 76.50000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 76.50000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 76.50000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 76.50000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 76.50000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 76.50000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 76.50000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 76.50000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 76.50000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 76.50000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 76.50000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 76.50000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 76.50000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 76.50000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 76.50000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 76.50000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 76.50000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 76.50000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 76.50000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 76.50000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 76.50000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 76.50000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 76.50000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 76.50000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 76.50000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 20070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 60930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 76.50000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 153.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 -76.50000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 153.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 76.50000 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 76.50000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 324 C - N - CA ANGL. DEV. = 15.1 DEGREES REMARK 500 PRO A 324 C - N - CD ANGL. DEV. = -16.0 DEGREES REMARK 500 LYS A 326 N - CA - C ANGL. DEV. = 18.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 10 -163.41 -122.00 REMARK 500 ASN A 38 159.49 179.10 REMARK 500 ASN A 53 27.07 -75.93 REMARK 500 ILE A 62 -110.80 60.36 REMARK 500 ASP A 77 1.65 -59.67 REMARK 500 CYS A 97 -168.43 -172.71 REMARK 500 GLU A 119 98.02 -61.15 REMARK 500 VAL A 130 -52.92 -149.78 REMARK 500 THR A 131 109.08 68.86 REMARK 500 GLN A 132 -176.02 -53.45 REMARK 500 ASN A 133 38.83 80.33 REMARK 500 CYS A 139 57.00 -113.59 REMARK 500 SER A 145 150.11 -43.47 REMARK 500 THR A 155 -132.66 -108.01 REMARK 500 SER A 159 32.36 -165.08 REMARK 500 ASN A 173 42.00 -92.00 REMARK 500 VAL A 196 -65.98 62.05 REMARK 500 SER A 279 124.25 -175.48 REMARK 500 ASN A 290 34.86 -95.09 REMARK 500 LEU A 314 103.14 -163.47 REMARK 500 VAL A 323 80.75 21.35 REMARK 500 PRO A 324 123.19 -4.83 REMARK 500 GLU A 325 -48.02 75.58 REMARK 500 LYS A 326 162.96 103.59 REMARK 500 GLN A 327 -83.96 118.01 REMARK 500 THR A 328 -87.47 -124.91 REMARK 500 LEU A 331 -107.88 100.26 REMARK 500 PHE A 332 -171.82 143.21 REMARK 500 ILE A 335 102.74 80.27 REMARK 500 PHE A 338 2.28 -66.81 REMARK 500 ILE A 339 -105.98 -56.56 REMARK 500 GLU A 340 36.99 -89.51 REMARK 500 ASN A 357 -155.57 -145.33 REMARK 500 THR A 388 -60.96 -121.62 REMARK 500 ASN A 389 87.40 65.11 REMARK 500 PHE A 392 -99.49 -109.25 REMARK 500 GLN A 394 -153.83 -126.52 REMARK 500 ARG A 405 -54.98 -27.91 REMARK 500 ARG A 456 -136.01 47.68 REMARK 500 TYR A 470 45.10 -72.76 REMARK 500 ASN A 483 44.17 -100.99 REMARK 500 ARG A 499 -73.52 -70.58 REMARK 500 PHE A 500 19.14 -67.05 REMARK 500 GLN A 501 109.18 141.11 REMARK 500 REMARK 500 REMARK: NULL DBREF 1HA0 A 9 502 UNP P03437 HEMA_IAAIC 25 518 SEQADV 1HA0 GLN A 329 UNP P03437 ARG 345 ENGINEERED MUTATION SEQADV 1HA0 ASN A 493 UNP P03437 ASP 509 CONFLICT SEQRES 1 A 494 SER THR ALA THR LEU CYS LEU GLY HIS HIS ALA VAL PRO SEQRES 2 A 494 ASN GLY THR LEU VAL LYS THR ILE THR ASP ASP GLN ILE SEQRES 3 A 494 GLU VAL THR ASN ALA THR GLU LEU VAL GLN SER SER SER SEQRES 4 A 494 THR GLY LYS ILE CYS ASN ASN PRO HIS ARG ILE LEU ASP SEQRES 5 A 494 GLY ILE ASP CYS THR LEU ILE ASP ALA LEU LEU GLY ASP SEQRES 6 A 494 PRO HIS CYS ASP VAL PHE GLN ASN GLU THR TRP ASP LEU SEQRES 7 A 494 PHE VAL GLU ARG SER LYS ALA PHE SER ASN CYS TYR PRO SEQRES 8 A 494 TYR ASP VAL PRO ASP TYR ALA SER LEU ARG SER LEU VAL SEQRES 9 A 494 ALA SER SER GLY THR LEU GLU PHE ILE THR GLU GLY PHE SEQRES 10 A 494 THR TRP THR GLY VAL THR GLN ASN GLY GLY SER ASN ALA SEQRES 11 A 494 CYS LYS ARG GLY PRO GLY SER GLY PHE PHE SER ARG LEU SEQRES 12 A 494 ASN TRP LEU THR LYS SER GLY SER THR TYR PRO VAL LEU SEQRES 13 A 494 ASN VAL THR MET PRO ASN ASN ASP ASN PHE ASP LYS LEU SEQRES 14 A 494 TYR ILE TRP GLY ILE HIS HIS PRO SER THR ASN GLN GLU SEQRES 15 A 494 GLN THR SER LEU TYR VAL GLN ALA SER GLY ARG VAL THR SEQRES 16 A 494 VAL SER THR ARG ARG SER GLN GLN THR ILE ILE PRO ASN SEQRES 17 A 494 ILE GLY SER ARG PRO TRP VAL ARG GLY LEU SER SER ARG SEQRES 18 A 494 ILE SER ILE TYR TRP THR ILE VAL LYS PRO GLY ASP VAL SEQRES 19 A 494 LEU VAL ILE ASN SER ASN GLY ASN LEU ILE ALA PRO ARG SEQRES 20 A 494 GLY TYR PHE LYS MET ARG THR GLY LYS SER SER ILE MET SEQRES 21 A 494 ARG SER ASP ALA PRO ILE ASP THR CYS ILE SER GLU CYS SEQRES 22 A 494 ILE THR PRO ASN GLY SER ILE PRO ASN ASP LYS PRO PHE SEQRES 23 A 494 GLN ASN VAL ASN LYS ILE THR TYR GLY ALA CYS PRO LYS SEQRES 24 A 494 TYR VAL LYS GLN ASN THR LEU LYS LEU ALA THR GLY MET SEQRES 25 A 494 ARG ASN VAL PRO GLU LYS GLN THR GLN GLY LEU PHE GLY SEQRES 26 A 494 ALA ILE ALA GLY PHE ILE GLU ASN GLY TRP GLU GLY MET SEQRES 27 A 494 ILE ASP GLY TRP TYR GLY PHE ARG HIS GLN ASN SER GLU SEQRES 28 A 494 GLY THR GLY GLN ALA ALA ASP LEU LYS SER THR GLN ALA SEQRES 29 A 494 ALA ILE ASP GLN ILE ASN GLY LYS LEU ASN ARG VAL ILE SEQRES 30 A 494 GLU LYS THR ASN GLU LYS PHE HIS GLN ILE GLU LYS GLU SEQRES 31 A 494 PHE SER GLU VAL GLU GLY ARG ILE GLN ASP LEU GLU LYS SEQRES 32 A 494 TYR VAL GLU ASP THR LYS ILE ASP LEU TRP SER TYR ASN SEQRES 33 A 494 ALA GLU LEU LEU VAL ALA LEU GLU ASN GLN HIS THR ILE SEQRES 34 A 494 ASP LEU THR ASP SER GLU MET ASN LYS LEU PHE GLU LYS SEQRES 35 A 494 THR ARG ARG GLN LEU ARG GLU ASN ALA GLU GLU MET GLY SEQRES 36 A 494 ASN GLY CYS PHE LYS ILE TYR HIS LYS CYS ASP ASN ALA SEQRES 37 A 494 CYS ILE GLU SER ILE ARG ASN GLY THR TYR ASP HIS ASP SEQRES 38 A 494 VAL TYR ARG ASN GLU ALA LEU ASN ASN ARG PHE GLN ILE MODRES 1HA0 ASN A 22 ASN GLYCOSYLATION SITE MODRES 1HA0 ASN A 38 ASN GLYCOSYLATION SITE MODRES 1HA0 ASN A 81 ASN GLYCOSYLATION SITE MODRES 1HA0 ASN A 165 ASN GLYCOSYLATION SITE MODRES 1HA0 ASN A 285 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET NAG D 1 14 HET NAG D 2 14 HET MAN D 3 11 HET NAG A1420 14 HET NAG A1440 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 8(C8 H15 N O6) FORMUL 2 BMA 2(C6 H12 O6) FORMUL 4 MAN C6 H12 O6 FORMUL 7 HOH *37(H2 O) HELIX 1 1 LEU A 66 LEU A 71 1 6 HELIX 2 2 ASP A 77 PHE A 79 5 3 HELIX 3 3 TYR A 105 SER A 115 1 11 HELIX 4 4 ASN A 137 CYS A 139 5 3 HELIX 5 5 ASN A 188 TYR A 195 1 8 HELIX 6 6 LEU A 367 ILE A 385 1 19 HELIX 7 7 ARG A 405 ASN A 458 1 54 HELIX 8 8 ASN A 475 ARG A 482 1 8 HELIX 9 9 ASP A 489 ARG A 499 1 11 SHEET 1 A 2 ALA A 39 GLU A 41 0 SHEET 2 A 2 LYS A 315 ALA A 317 -1 N LEU A 316 O THR A 40 SHEET 1 C 2 LYS A 50 CYS A 52 0 SHEET 2 C 2 PRO A 273 ASP A 275 1 N PRO A 273 O ILE A 51 SHEET 1 D 3 ILE A 58 ASP A 60 0 SHEET 2 D 3 LEU A 86 GLU A 89 1 N LEU A 86 O LEU A 59 SHEET 3 D 3 SER A 266 ARG A 269 1 N SER A 266 O PHE A 87 SHEET 1 E 3 TYR A 100 VAL A 102 0 SHEET 2 E 3 ARG A 229 VAL A 237 1 N ILE A 230 O ASP A 101 SHEET 3 E 3 LYS A 176 HIS A 184 -1 N HIS A 184 O ARG A 229 SHEET 1 F 2 PHE A 120 THR A 122 0 SHEET 2 F 2 GLY A 256 PHE A 258 -1 N TYR A 257 O ILE A 121 SHEET 1 G 2 LEU A 151 TRP A 153 0 SHEET 2 G 2 ILE A 252 PRO A 254 -1 N ALA A 253 O ASN A 152 SHEET 1 H 4 LEU A 164 PRO A 169 0 SHEET 2 H 4 VAL A 242 SER A 247 -1 N SER A 247 O LEU A 164 SHEET 3 H 4 VAL A 202 SER A 205 -1 N SER A 205 O VAL A 244 SHEET 4 H 4 GLN A 210 ILE A 213 -1 N ILE A 213 O VAL A 202 SHEET 1 I 2 SER A 136 ARG A 141 0 SHEET 2 I 2 GLY A 144 GLY A 146 -1 N GLY A 146 O SER A 136 SHEET 1 J 2 GLY A 352 ASN A 357 0 SHEET 2 J 2 GLY A 360 ALA A 365 -1 N ALA A 364 O PHE A 353 SHEET 1 K 2 ALA A 459 GLU A 461 0 SHEET 2 K 2 PHE A 467 ILE A 469 -1 N LYS A 468 O GLU A 460 SSBOND 1 CYS A 14 CYS A 466 1555 1555 2.03 SSBOND 2 CYS A 52 CYS A 277 1555 1555 2.03 SSBOND 3 CYS A 64 CYS A 76 1555 1555 2.03 SSBOND 4 CYS A 97 CYS A 139 1555 1555 2.03 SSBOND 5 CYS A 281 CYS A 305 1555 1555 2.04 SSBOND 6 CYS A 473 CYS A 477 1555 1555 2.04 LINK ND2 ASN A 22 C1 NAG A1420 1555 1555 1.46 LINK ND2 ASN A 38 C1 NAG B 1 1555 1555 1.45 LINK ND2 ASN A 81 C1 NAG A1440 1555 1555 1.45 LINK ND2 ASN A 165 C1 NAG C 1 1555 1555 1.46 LINK ND2 ASN A 285 C1 NAG D 1 1555 1555 1.46 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.39 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.39 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.38 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.39 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.40 LINK O4 NAG D 2 C1 MAN D 3 1555 1555 1.40 CISPEP 1 ASN A 54 PRO A 55 0 0.59 CRYST1 153.000 153.000 153.000 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006536 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006536 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006536 0.00000