PDB Short entry for 1HF0 HEADER TRANSCRIPTION 27-NOV-00 1HF0 TITLE CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF OCT-1 BOUND TO DNA AS A TITLE 2 DIMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: OCTAMER-BINDING TRANSCRIPTION FACTOR 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: DNA-BINDING DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA 5'-D(*CP*AP*CP*AP*TP*TP*TP*GP*AP*AP*AP*GP*GP* COMPND 9 CP*AP*AP*AP*TP*GP*GP*AP*G)-3'; COMPND 10 CHAIN: M; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA 5'-D(*CP*TP*CP*CP*AP*TP*TP*TP*GP*CP*CP*TP*TP* COMPND 14 TP*CP*AP*AP*AP*TP*GP*TP*G)-3'; COMPND 15 CHAIN: N; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 ORGANELLE: NUCLEUS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET24D; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES KEYWDS TRANSCRIPTION, OCT-1, POU DOMAIN, DIMER EXPDTA X-RAY DIFFRACTION AUTHOR A.REMENYI,A.TOMILIN,E.POHL,H.R.SCHOLER,M.WILMANNS REVDAT 4 24-JUL-19 1HF0 1 REMARK REVDAT 3 14-NOV-12 1HF0 1 HEADER KEYWDS REMARK VERSN REVDAT 3 2 1 DBREF SEQADV FORMUL REVDAT 2 24-FEB-09 1HF0 1 VERSN REVDAT 1 10-NOV-01 1HF0 0 JRNL AUTH A.REMENYI,A.TOMILIN,E.POHL,K.LINS,A.PHILIPPSEN,R.REINBOLD, JRNL AUTH 2 H.R.SCHOLER,M.WILMANNS JRNL TITL DIFFERENTIAL DIMER ACTIVITIES OF THE TRANSCRIPTION FACTOR JRNL TITL 2 OCT-1 BY DNA-INDUCED INTERFACE SWAPPING JRNL REF MOL.CELL V. 8 569 2001 JRNL REFN ISSN 1097-2765 JRNL PMID 11583619 JRNL DOI 10.1016/S1097-2765(01)00336-7 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 16742 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.294 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 818 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 16 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.76 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 975 REMARK 3 BIN R VALUE (WORKING SET) : 0.3719 REMARK 3 BIN FREE R VALUE : 0.4312 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 33 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2064 REMARK 3 NUCLEIC ACID ATOMS : 896 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 119 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HF0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-NOV-00. REMARK 100 THE DEPOSITION ID IS D_1290005584. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-00 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.30 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8856, 0.9185, 0.9190, 0.8424 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16742 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : 0.05800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.38900 REMARK 200 R SYM FOR SHELL (I) : 0.38900 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 5.30 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.66667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 38.83333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 77.66667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 38.83333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 77.66667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 38.83333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 77.66667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 38.83333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, M, N REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 1 REMARK 465 GLU A 2 REMARK 465 PRO A 3 REMARK 465 SER A 4 REMARK 465 ASP A 5 REMARK 465 ASN A 76 REMARK 465 LEU A 77 REMARK 465 SER A 78 REMARK 465 SER A 79 REMARK 465 ASP A 80 REMARK 465 SER A 81 REMARK 465 SER A 82 REMARK 465 LEU A 83 REMARK 465 SER A 84 REMARK 465 SER A 85 REMARK 465 PRO A 86 REMARK 465 SER A 87 REMARK 465 ALA A 88 REMARK 465 LEU A 89 REMARK 465 ASN A 90 REMARK 465 SER A 91 REMARK 465 PRO A 92 REMARK 465 GLY A 93 REMARK 465 ILE A 94 REMARK 465 GLU A 95 REMARK 465 GLY A 96 REMARK 465 LEU A 97 REMARK 465 SER A 98 REMARK 465 ARG A 99 REMARK 465 ARG A 100 REMARK 465 ASN A 160 REMARK 465 GLU B 1 REMARK 465 GLU B 2 REMARK 465 PRO B 3 REMARK 465 SER B 4 REMARK 465 ASP B 5 REMARK 465 ASN B 76 REMARK 465 LEU B 77 REMARK 465 SER B 78 REMARK 465 SER B 79 REMARK 465 ASP B 80 REMARK 465 SER B 81 REMARK 465 SER B 82 REMARK 465 LEU B 83 REMARK 465 SER B 84 REMARK 465 SER B 85 REMARK 465 PRO B 86 REMARK 465 SER B 87 REMARK 465 ALA B 88 REMARK 465 LEU B 89 REMARK 465 ASN B 90 REMARK 465 SER B 91 REMARK 465 PRO B 92 REMARK 465 GLY B 93 REMARK 465 ILE B 94 REMARK 465 GLU B 95 REMARK 465 GLY B 96 REMARK 465 LEU B 97 REMARK 465 SER B 98 REMARK 465 ARG B 99 REMARK 465 ARG B 100 REMARK 465 ASN B 160 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 7 CG CD OE1 OE2 REMARK 470 GLU A 8 CG CD OE1 OE2 REMARK 470 LEU A 37 CG CD1 CD2 REMARK 470 TYR A 38 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN A 40 CG OD1 ND2 REMARK 470 LYS A 69 CG CD CE NZ REMARK 470 GLU B 7 CG CD OE1 OE2 REMARK 470 GLU B 8 CG CD OE1 OE2 REMARK 470 LEU B 37 CG CD1 CD2 REMARK 470 TYR B 38 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN B 40 CG OD1 ND2 REMARK 470 ASP B 41 CG OD1 OD2 REMARK 470 LEU B 63 CG CD1 CD2 REMARK 470 LYS B 64 CG CD CE NZ REMARK 470 LYS B 69 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA N 16 C3' - C2' - C1' ANGL. DEV. = -5.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 8 -11.63 -46.71 REMARK 500 ASN A 40 -140.70 -58.53 REMARK 500 ASP A 41 117.50 172.65 REMARK 500 THR A 110 -63.80 -20.87 REMARK 500 ALA B 13 -71.13 -63.89 REMARK 500 GLN B 18 -74.67 -46.77 REMARK 500 LYS B 36 -73.77 -101.68 REMARK 500 LEU B 37 -92.93 -38.70 REMARK 500 TYR B 38 6.21 -57.49 REMARK 500 ASN B 40 -156.90 -93.76 REMARK 500 PHE B 57 -76.72 -24.22 REMARK 500 LYS B 64 -62.62 -19.85 REMARK 500 ASN B 139 55.38 77.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DG M 8 0.05 SIDE CHAIN REMARK 500 DC N 1 0.06 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1CQT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A TERNARY COMPLEX CONTAINING AN OCA-B PEPTIDE, REMARK 900 THE OCT-1 POU DOMAIN, AND AN OCTAMER ELEMENT REMARK 900 RELATED ID: 1E3O RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF OCT-1 POU DIMER BOUND TO MORE DBREF 1HF0 A 1 160 UNP P14859 OCT1_HUMAN 280 438 DBREF 1HF0 B 1 160 UNP P14859 OCT1_HUMAN 280 438 DBREF 1HF0 M 1 22 PDB 1HF0 1HF0 1 22 DBREF 1HF0 N 1 22 PDB 1HF0 1HF0 1 22 SEQADV 1HF0 SER A 61 UNP P14859 CYS 340 ENGINEERED MUTATION SEQADV 1HF0 SER A 150 UNP P14859 CYS 428 ENGINEERED MUTATION SEQADV 1HF0 SER B 61 UNP P14859 CYS 340 ENGINEERED MUTATION SEQADV 1HF0 SER B 150 UNP P14859 CYS 428 ENGINEERED MUTATION SEQRES 1 A 159 GLU GLU PRO SER ASP LEU GLU GLU LEU GLU GLN PHE ALA SEQRES 2 A 159 LYS THR PHE LYS GLN ARG ARG ILE LYS LEU GLY PHE THR SEQRES 3 A 159 GLN GLY ASP VAL GLY LEU ALA MET GLY LYS LEU TYR GLY SEQRES 4 A 159 ASN ASP PHE SER GLN THR THR ILE SER ARG PHE GLU ALA SEQRES 5 A 159 LEU ASN LEU SER PHE LYS ASN MET SER LYS LEU LYS PRO SEQRES 6 A 159 LEU LEU GLU LYS TRP LEU ASN ASP ALA GLU ASN LEU SER SEQRES 7 A 159 SER ASP SER SER LEU SER SER PRO SER ALA LEU ASN SER SEQRES 8 A 159 PRO GLY ILE GLU GLY LEU SER ARG ARG ARG LYS LYS ARG SEQRES 9 A 159 THR SER ILE GLU THR ASN ILE ARG VAL ALA LEU GLU LYS SEQRES 10 A 159 SER PHE LEU GLU ASN GLN LYS PRO THR SER GLU GLU ILE SEQRES 11 A 159 THR MET ILE ALA ASP GLN LEU ASN MET GLU LYS GLU VAL SEQRES 12 A 159 ILE ARG VAL TRP PHE SER ASN ARG ARG GLN LYS GLU LYS SEQRES 13 A 159 ARG ILE ASN SEQRES 1 B 159 GLU GLU PRO SER ASP LEU GLU GLU LEU GLU GLN PHE ALA SEQRES 2 B 159 LYS THR PHE LYS GLN ARG ARG ILE LYS LEU GLY PHE THR SEQRES 3 B 159 GLN GLY ASP VAL GLY LEU ALA MET GLY LYS LEU TYR GLY SEQRES 4 B 159 ASN ASP PHE SER GLN THR THR ILE SER ARG PHE GLU ALA SEQRES 5 B 159 LEU ASN LEU SER PHE LYS ASN MET SER LYS LEU LYS PRO SEQRES 6 B 159 LEU LEU GLU LYS TRP LEU ASN ASP ALA GLU ASN LEU SER SEQRES 7 B 159 SER ASP SER SER LEU SER SER PRO SER ALA LEU ASN SER SEQRES 8 B 159 PRO GLY ILE GLU GLY LEU SER ARG ARG ARG LYS LYS ARG SEQRES 9 B 159 THR SER ILE GLU THR ASN ILE ARG VAL ALA LEU GLU LYS SEQRES 10 B 159 SER PHE LEU GLU ASN GLN LYS PRO THR SER GLU GLU ILE SEQRES 11 B 159 THR MET ILE ALA ASP GLN LEU ASN MET GLU LYS GLU VAL SEQRES 12 B 159 ILE ARG VAL TRP PHE SER ASN ARG ARG GLN LYS GLU LYS SEQRES 13 B 159 ARG ILE ASN SEQRES 1 M 22 DC DA DC DA DT DT DT DG DA DA DA DG DG SEQRES 2 M 22 DC DA DA DA DT DG DG DA DG SEQRES 1 N 22 DC DT DC DC DA DT DT DT DG DC DC DT DT SEQRES 2 N 22 DT DC DA DA DA DT DG DT DG FORMUL 5 HOH *119(H2 O) HELIX 1 1 LEU A 6 LEU A 23 1 18 HELIX 2 2 THR A 26 TYR A 38 1 13 HELIX 3 3 SER A 43 ALA A 52 1 10 HELIX 4 4 SER A 56 GLU A 75 1 20 HELIX 5 5 GLU A 109 ASN A 123 1 15 HELIX 6 6 THR A 127 ASN A 139 1 13 HELIX 7 7 GLU A 141 LYS A 157 1 17 HELIX 8 8 LEU B 6 GLY B 24 1 19 HELIX 9 9 THR B 26 LEU B 37 1 12 HELIX 10 10 SER B 43 ALA B 52 1 10 HELIX 11 11 SER B 56 GLU B 75 1 20 HELIX 12 12 GLU B 109 ASN B 123 1 15 HELIX 13 13 THR B 127 ASN B 139 1 13 HELIX 14 14 GLU B 141 LYS B 157 1 17 CRYST1 131.250 131.250 116.500 90.00 90.00 120.00 P 62 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007619 0.004399 0.000000 0.00000 SCALE2 0.000000 0.008798 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008584 0.00000