PDB Short entry for 1HMP HEADER TRANSFERASE (GLYCOSYLTRANSFERASE) 03-JUN-94 1HMP TITLE THE CRYSTAL STRUCTURE OF HUMAN HYPOXANTHINE-GUANINE TITLE 2 PHOSPHORIBOSYLTRANSFERASE WITH BOUND GMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOXANTHINE GUANINE PHOSPHORIBOSYL-TRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.4.2.8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS TRANSFERASE (GLYCOSYLTRANSFERASE) EXPDTA X-RAY DIFFRACTION AUTHOR J.C.EADS,G.SCAPIN,Y.XU,C.GRUBMEYER,J.C.SACCHETTINI REVDAT 6 07-FEB-24 1HMP 1 REMARK REVDAT 5 14-AUG-19 1HMP 1 REMARK REVDAT 4 17-JUL-19 1HMP 1 REMARK REVDAT 3 13-JUL-11 1HMP 1 VERSN REVDAT 2 24-FEB-09 1HMP 1 VERSN REVDAT 1 03-JUN-95 1HMP 0 JRNL AUTH J.C.EADS,G.SCAPIN,Y.XU,C.GRUBMEYER,J.C.SACCHETTINI JRNL TITL THE CRYSTAL STRUCTURE OF HUMAN HYPOXANTHINE-GUANINE JRNL TITL 2 PHOSPHORIBOSYLTRANSFERASE WITH BOUND GMP. JRNL REF CELL(CAMBRIDGE,MASS.) V. 78 325 1994 JRNL REFN ISSN 0092-8674 JRNL PMID 8044844 JRNL DOI 10.1016/0092-8674(94)90301-8 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH G.SCAPIN,C.GRUBMEYER,J.C.SACCHETTINI REMARK 1 TITL CRYSTAL STRUCTURE OF OROTATE PHOSPHORIBOSYLTRANSFERASE REMARK 1 REF BIOCHEMISTRY V. 33 1287 1994 REMARK 1 REFN ISSN 0006-2960 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 14328 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3297 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 85 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : NULL ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 A LOOP OF RESIDUES 103 - 121 IN BOTH CHAINS A AND B IS REMARK 3 POORLY ORDERED. COORDINATES GIVEN FOR THIS REGION RESULT REMARK 3 FROM A TENTATIVE FITTING TO POOR ELECTRON DENSITY AND REMARK 3 SHOULD BE TREATED WITH CAUTION. FOR THIS LOOP IN THE REMARK 3 SECOND MONOMER, RESIDUES 105 - 108 AND 121 ARE MISSING. REMARK 3 SOME RESIDUES IN THIS REGION ARE MODELED AS ALANINE REMARK 3 RESIDUES. REMARK 4 REMARK 4 1HMP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000173919. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 64.75000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.22500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 64.75000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.22500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 11460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -66.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 129.50000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 66.45000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 THR A 2 REMARK 465 ARG A 3 REMARK 465 ALA B 1 REMARK 465 THR B 2 REMARK 465 ARG B 3 REMARK 465 CYS B 105 REMARK 465 ASN B 106 REMARK 465 ASP B 107 REMARK 465 GLN B 108 REMARK 465 LEU B 121 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 101 CG CD1 CD2 REMARK 470 ASP A 112 CG OD1 OD2 REMARK 470 VAL A 115 CG1 CG2 REMARK 470 ILE A 116 CG1 CG2 CD1 REMARK 470 ASP A 119 CG OD1 OD2 REMARK 470 ASP A 120 CG OD1 OD2 REMARK 470 LYS B 102 CG CD CE NZ REMARK 470 SER B 103 OG REMARK 470 TYR B 104 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER B 109 OG REMARK 470 THR B 110 OG1 CG2 REMARK 470 ASP B 112 CG OD1 OD2 REMARK 470 ILE B 113 CG1 CG2 CD1 REMARK 470 LYS B 114 CG CD CE NZ REMARK 470 VAL B 115 CG1 CG2 REMARK 470 ILE B 116 CG1 CG2 CD1 REMARK 470 ASP B 119 CG OD1 OD2 REMARK 470 ASP B 120 CG OD1 OD2 REMARK 470 SER B 122 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 29 CD GLU A 29 OE1 0.067 REMARK 500 GLU A 32 CD GLU A 32 OE2 0.072 REMARK 500 GLU A 55 CD GLU A 55 OE2 0.070 REMARK 500 GLU A 133 CD GLU A 133 OE1 0.070 REMARK 500 GLU A 181 CD GLU A 181 OE2 0.086 REMARK 500 GLU A 196 CD GLU A 196 OE2 0.076 REMARK 500 GLU B 29 CD GLU B 29 OE1 0.088 REMARK 500 GLU B 32 CD GLU B 32 OE2 0.085 REMARK 500 GLU B 196 CD GLU B 196 OE1 0.078 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 12 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP A 17 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ASP A 19 CB - CG - OD1 ANGL. DEV. = -6.1 DEGREES REMARK 500 ASP A 19 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG A 33 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 50 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 TYR A 71 N - CA - CB ANGL. DEV. = -15.3 DEGREES REMARK 500 TYR A 71 CB - CG - CD1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ASP A 76 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ASP A 89 CB - CG - OD1 ANGL. DEV. = -5.9 DEGREES REMARK 500 ASP A 107 CB - CG - OD1 ANGL. DEV. = -6.2 DEGREES REMARK 500 SER A 109 N - CA - CB ANGL. DEV. = 11.5 DEGREES REMARK 500 ASP A 134 CB - CG - OD1 ANGL. DEV. = -6.1 DEGREES REMARK 500 ASP A 137 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG A 150 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 166 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 PRO A 168 C - N - CD ANGL. DEV. = -12.8 DEGREES REMARK 500 ASP A 176 CB - CG - OD1 ANGL. DEV. = -5.8 DEGREES REMARK 500 ASP A 193 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP A 193 CB - CG - OD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ASP A 200 CB - CG - OD1 ANGL. DEV. = -6.5 DEGREES REMARK 500 ASP A 200 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 PRO B 5 C - N - CA ANGL. DEV. = 11.0 DEGREES REMARK 500 ASP B 12 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP B 12 CB - CG - OD2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ASP B 17 CB - CG - OD2 ANGL. DEV. = -7.0 DEGREES REMARK 500 ASP B 19 N - CA - CB ANGL. DEV. = 11.4 DEGREES REMARK 500 ASP B 19 CB - CG - OD1 ANGL. DEV. = -6.0 DEGREES REMARK 500 ASP B 43 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP B 43 CB - CG - OD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 TYR B 71 CB - CG - CD1 ANGL. DEV. = -4.0 DEGREES REMARK 500 ASP B 79 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP B 79 CB - CG - OD2 ANGL. DEV. = -7.7 DEGREES REMARK 500 ARG B 86 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ASP B 89 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ASP B 97 CB - CG - OD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 ARG B 100 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 SER B 103 N - CA - CB ANGL. DEV. = 9.3 DEGREES REMARK 500 ASP B 134 CB - CG - OD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 TYR B 152 CB - CG - CD1 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG B 166 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG B 169 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 SER B 170 N - CA - CB ANGL. DEV. = 9.3 DEGREES REMARK 500 ASP B 176 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP B 176 CB - CG - OD2 ANGL. DEV. = -8.0 DEGREES REMARK 500 ASP B 184 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG B 199 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 28 22.76 -79.54 REMARK 500 GLU A 29 -13.79 -145.15 REMARK 500 LYS A 68 -102.57 -65.62 REMARK 500 LYS A 102 84.48 -45.39 REMARK 500 SER A 103 -136.66 -76.44 REMARK 500 TYR A 104 -84.58 -96.92 REMARK 500 CYS A 105 -94.77 -97.66 REMARK 500 ASN A 106 -57.82 -149.36 REMARK 500 ASP A 107 48.36 31.56 REMARK 500 GLN A 108 176.35 49.39 REMARK 500 SER A 109 152.28 132.24 REMARK 500 ASP A 112 -70.91 -41.83 REMARK 500 LYS A 114 -88.16 -178.45 REMARK 500 THR A 125 118.33 161.14 REMARK 500 ASP A 137 -89.06 -109.62 REMARK 500 TYR A 152 8.33 -47.13 REMARK 500 ASN A 153 78.45 48.86 REMARK 500 MET A 156 130.12 -174.07 REMARK 500 VAL A 171 2.95 -67.32 REMARK 500 PRO A 175 -178.52 -53.36 REMARK 500 ASP A 184 59.55 -58.23 REMARK 500 TYR A 190 -81.45 75.27 REMARK 500 LYS B 68 -45.60 -27.94 REMARK 500 LEU B 101 142.70 111.55 REMARK 500 LYS B 102 62.64 -169.87 REMARK 500 SER B 103 40.54 104.61 REMARK 500 THR B 110 -115.83 80.11 REMARK 500 VAL B 115 -79.52 -142.26 REMARK 500 ASP B 137 -90.52 -112.63 REMARK 500 MET B 156 146.24 -178.95 REMARK 500 TYR B 190 -96.60 60.03 REMARK 500 GLU B 196 3.11 81.36 REMARK 500 LYS B 216 -116.24 -168.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 THE HET GROUP HAS A CHARGE OF 1- AT PH 5.6. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 5GP A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 5GP B 800 DBREF 1HMP A 1 217 UNP P00492 HPRT_HUMAN 1 217 DBREF 1HMP B 1 217 UNP P00492 HPRT_HUMAN 1 217 SEQRES 1 A 217 ALA THR ARG SER PRO GLY VAL VAL ILE SER ASP ASP GLU SEQRES 2 A 217 PRO GLY TYR ASP LEU ASP LEU PHE CYS ILE PRO ASN HIS SEQRES 3 A 217 TYR ALA GLU ASP LEU GLU ARG VAL PHE ILE PRO HIS GLY SEQRES 4 A 217 LEU ILE MET ASP ARG THR GLU ARG LEU ALA ARG ASP VAL SEQRES 5 A 217 MET LYS GLU MET GLY GLY HIS HIS ILE VAL ALA LEU CYS SEQRES 6 A 217 VAL LEU LYS GLY GLY TYR LYS PHE PHE ALA ASP LEU LEU SEQRES 7 A 217 ASP TYR ILE LYS ALA LEU ASN ARG ASN SER ASP ARG SER SEQRES 8 A 217 ILE PRO MET THR VAL ASP PHE ILE ARG LEU LYS SER TYR SEQRES 9 A 217 CYS ASN ASP GLN SER THR GLY ASP ILE LYS VAL ILE GLY SEQRES 10 A 217 GLY ASP ASP LEU SER THR LEU THR GLY LYS ASN VAL LEU SEQRES 11 A 217 ILE VAL GLU ASP ILE ILE ASP THR GLY LYS THR MET GLN SEQRES 12 A 217 THR LEU LEU SER LEU VAL ARG GLN TYR ASN PRO LYS MET SEQRES 13 A 217 VAL LYS VAL ALA SER LEU LEU VAL LYS ARG THR PRO ARG SEQRES 14 A 217 SER VAL GLY TYR LYS PRO ASP PHE VAL GLY PHE GLU ILE SEQRES 15 A 217 PRO ASP LYS PHE VAL VAL GLY TYR ALA LEU ASP TYR ASN SEQRES 16 A 217 GLU TYR PHE ARG ASP LEU ASN HIS VAL CYS VAL ILE SER SEQRES 17 A 217 GLU THR GLY LYS ALA LYS TYR LYS ALA SEQRES 1 B 217 ALA THR ARG SER PRO GLY VAL VAL ILE SER ASP ASP GLU SEQRES 2 B 217 PRO GLY TYR ASP LEU ASP LEU PHE CYS ILE PRO ASN HIS SEQRES 3 B 217 TYR ALA GLU ASP LEU GLU ARG VAL PHE ILE PRO HIS GLY SEQRES 4 B 217 LEU ILE MET ASP ARG THR GLU ARG LEU ALA ARG ASP VAL SEQRES 5 B 217 MET LYS GLU MET GLY GLY HIS HIS ILE VAL ALA LEU CYS SEQRES 6 B 217 VAL LEU LYS GLY GLY TYR LYS PHE PHE ALA ASP LEU LEU SEQRES 7 B 217 ASP TYR ILE LYS ALA LEU ASN ARG ASN SER ASP ARG SER SEQRES 8 B 217 ILE PRO MET THR VAL ASP PHE ILE ARG LEU LYS SER TYR SEQRES 9 B 217 CYS ASN ASP GLN SER THR GLY ASP ILE LYS VAL ILE GLY SEQRES 10 B 217 GLY ASP ASP LEU SER THR LEU THR GLY LYS ASN VAL LEU SEQRES 11 B 217 ILE VAL GLU ASP ILE ILE ASP THR GLY LYS THR MET GLN SEQRES 12 B 217 THR LEU LEU SER LEU VAL ARG GLN TYR ASN PRO LYS MET SEQRES 13 B 217 VAL LYS VAL ALA SER LEU LEU VAL LYS ARG THR PRO ARG SEQRES 14 B 217 SER VAL GLY TYR LYS PRO ASP PHE VAL GLY PHE GLU ILE SEQRES 15 B 217 PRO ASP LYS PHE VAL VAL GLY TYR ALA LEU ASP TYR ASN SEQRES 16 B 217 GLU TYR PHE ARG ASP LEU ASN HIS VAL CYS VAL ILE SER SEQRES 17 B 217 GLU THR GLY LYS ALA LYS TYR LYS ALA HET 5GP A 300 24 HET 5GP B 800 24 HETNAM 5GP GUANOSINE-5'-MONOPHOSPHATE FORMUL 3 5GP 2(C10 H14 N5 O8 P) FORMUL 5 HOH *85(H2 O) HELIX 1 A1 ASN A 25 GLU A 29 1 5 HELIX 2 A2 HIS A 38 LYS A 54 1 17 HELIX 3 A3 LYS A 72 ARG A 86 1 15 HELIX 4 A4 GLY A 118 THR A 123 1 6 HELIX 5 A5 LYS A 140 GLN A 151 1 12 HELIX 6 A6 GLU A 209 LYS A 214 1 6 HELIX 7 B1 ASN B 25 GLU B 29 1 5 HELIX 8 B2 HIS B 38 LYS B 54 1 17 HELIX 9 B3 LYS B 72 ARG B 86 1 15 HELIX 10 B4 GLY B 118 THR B 123 1 5 HELIX 11 B5 LYS B 140 GLN B 151 1 12 HELIX 12 B6 GLU B 209 LYS B 214 1 6 SHEET 1 AA 4 SER A 10 ASP A 17 0 SHEET 2 AA 4 PHE A 180 PRO A 183 -1 O GLU A 181 N ASP A 17 SHEET 3 AA 4 LEU A 163 THR A 167 1 O VAL A 164 N ILE A 182 SHEET 4 AA 4 ILE A 135 ILE A 136 1 O ILE A 136 N LYS A 165 SHEET 1 AB 4 ARG A 33 ILE A 36 0 SHEET 2 AB 4 HIS A 203 SER A 208 -1 O VAL A 204 N PHE A 35 SHEET 3 AB 4 PHE A 186 GLY A 189 -1 O VAL A 188 N CYS A 205 SHEET 4 AB 4 LEU A 192 TYR A 194 -1 O LEU A 192 N GLY A 189 SHEET 1 AC 5 SER A 91 LYS A 102 0 SHEET 2 AC 5 HIS A 60 LEU A 67 1 O CYS A 65 N ILE A 99 SHEET 3 AC 5 LYS A 127 GLU A 133 1 O VAL A 132 N VAL A 66 SHEET 4 AC 5 MET A 156 SER A 161 1 O ALA A 160 N GLU A 133 SHEET 5 AC 5 PHE A 177 VAL A 178 1 O PHE A 177 N SER A 161 SHEET 1 BA 4 SER B 10 ASP B 17 0 SHEET 2 BA 4 PHE B 180 PRO B 183 1 O GLU B 181 N ASP B 17 SHEET 3 BA 4 LEU B 163 THR B 167 1 O VAL B 164 N ILE B 182 SHEET 4 BA 4 ILE B 135 ILE B 136 1 O ILE B 136 N LYS B 165 SHEET 1 BB 4 ARG B 33 ILE B 36 0 SHEET 2 BB 4 HIS B 203 SER B 208 -1 O VAL B 204 N PHE B 35 SHEET 3 BB 4 PHE B 186 GLY B 189 -1 O VAL B 188 N CYS B 205 SHEET 4 BB 4 LEU B 192 TYR B 194 -1 O LEU B 192 N GLY B 189 SHEET 1 BC 5 SER B 91 LYS B 102 0 SHEET 2 BC 5 HIS B 60 LEU B 67 1 O CYS B 65 N ILE B 99 SHEET 3 BC 5 LYS B 127 GLU B 133 1 O VAL B 132 N VAL B 66 SHEET 4 BC 5 MET B 156 SER B 161 1 O ALA B 160 N GLU B 133 SHEET 5 BC 5 PHE B 177 VAL B 178 1 O PHE B 177 N SER B 161 SITE 1 AC1 17 LYS A 68 GLU A 133 ASP A 134 ILE A 135 SITE 2 AC1 17 ASP A 137 THR A 138 GLY A 139 LYS A 140 SITE 3 AC1 17 THR A 141 LYS A 165 LYS A 185 PHE A 186 SITE 4 AC1 17 VAL A 187 LEU A 192 ASP A 193 HOH A 843 SITE 5 AC1 17 HOH A 893 SITE 1 AC2 14 LYS B 68 GLU B 133 ILE B 135 ASP B 137 SITE 2 AC2 14 THR B 138 GLY B 139 THR B 141 LYS B 165 SITE 3 AC2 14 LYS B 185 PHE B 186 VAL B 187 ASP B 193 SITE 4 AC2 14 HOH B 851 HOH B 876 CRYST1 129.500 66.450 52.900 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007722 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015049 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018904 0.00000