PDB Short entry for 1HPL HEADER HYDROLASE(CARBOXYLIC ESTERASE) 27-JAN-93 1HPL TITLE HORSE PANCREATIC LIPASE. THE CRYSTAL STRUCTURE AT 2.3 ANGSTROMS TITLE 2 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIPASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.1.3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EQUUS CABALLUS; SOURCE 3 ORGANISM_COMMON: HORSE; SOURCE 4 ORGANISM_TAXID: 9796 KEYWDS HYDROLASE(CARBOXYLIC ESTERASE) EXPDTA X-RAY DIFFRACTION AUTHOR Y.BOURNE,C.CAMBILLAU REVDAT 3 29-NOV-17 1HPL 1 HELIX REVDAT 2 24-FEB-09 1HPL 1 VERSN REVDAT 1 31-MAY-94 1HPL 0 JRNL AUTH Y.BOURNE,C.MARTINEZ,B.KERFELEC,D.LOMBARDO,C.CHAPUS, JRNL AUTH 2 C.CAMBILLAU JRNL TITL HORSE PANCREATIC LIPASE. THE CRYSTAL STRUCTURE REFINED AT JRNL TITL 2 2.3 A RESOLUTION. JRNL REF J.MOL.BIOL. V. 238 709 1994 JRNL REFN ISSN 0022-2836 JRNL PMID 8182745 JRNL DOI 10.1006/JMBI.1994.1331 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.LOMBARDO,C.CHAPUS,Y.BOURNE,C.CAMBILLAU REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY STUDY OF HORSE REMARK 1 TITL 2 PANCREATIC LIPASE REMARK 1 REF J.MOL.BIOL. V. 205 259 1989 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7002 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 705 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.015 REMARK 3 BOND ANGLES (DEGREES) : 3.100 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HPL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000173957. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.90000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.65000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.60000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.65000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.90000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.60000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER B 333 N ASN B 334 1.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASN B 1 O HOH A 1307 2565 1.68 REMARK 500 OE2 GLU A 302 O HOH B 1043 2564 1.97 REMARK 500 NH2 ARG B 256 OE2 GLU B 396 3655 2.12 REMARK 500 CD GLU A 302 O HOH B 1043 2564 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 75 NE2 HIS A 75 CD2 -0.075 REMARK 500 HIS A 147 NE2 HIS A 147 CD2 -0.074 REMARK 500 HIS A 223 NE2 HIS A 223 CD2 -0.066 REMARK 500 HIS B 147 NE2 HIS B 147 CD2 -0.089 REMARK 500 HIS B 151 NE2 HIS B 151 CD2 -0.070 REMARK 500 HIS B 203 NE2 HIS B 203 CD2 -0.067 REMARK 500 HIS B 223 NE2 HIS B 223 CD2 -0.079 REMARK 500 HIS B 263 NE2 HIS B 263 CD2 -0.073 REMARK 500 HIS B 354 NE2 HIS B 354 CD2 -0.068 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 5 CB - CG - CD1 ANGL. DEV. = -4.9 DEGREES REMARK 500 ARG A 7 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 TRP A 17 CD1 - CG - CD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 TRP A 17 CB - CG - CD1 ANGL. DEV. = -8.6 DEGREES REMARK 500 TRP A 17 CE2 - CD2 - CG ANGL. DEV. = -6.1 DEGREES REMARK 500 TRP A 17 CG - CD2 - CE3 ANGL. DEV. = 6.8 DEGREES REMARK 500 TRP A 30 CD1 - CG - CD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP A 30 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 TRP A 85 CD1 - CG - CD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP A 85 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 TRP A 106 CE2 - CD2 - CG ANGL. DEV. = -4.9 DEGREES REMARK 500 ARG A 122 NE - CZ - NH1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG A 122 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 HIS A 156 CE1 - NE2 - CD2 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG A 163 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 164 NE - CZ - NH1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG A 164 NE - CZ - NH2 ANGL. DEV. = -7.1 DEGREES REMARK 500 ARG A 171 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG A 171 NE - CZ - NH2 ANGL. DEV. = -5.2 DEGREES REMARK 500 ARG A 190 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 TRP A 252 CD1 - CG - CD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 TRP A 252 CE2 - CD2 - CG ANGL. DEV. = -5.5 DEGREES REMARK 500 SER A 300 N - CA - CB ANGL. DEV. = -9.4 DEGREES REMARK 500 ARG A 313 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 PRO A 315 CA - C - N ANGL. DEV. = 12.2 DEGREES REMARK 500 ARG A 317 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 SER A 333 CA - C - N ANGL. DEV. = 20.2 DEGREES REMARK 500 SER A 333 O - C - N ANGL. DEV. = -31.5 DEGREES REMARK 500 ARG A 337 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 337 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 TRP A 338 CD1 - CG - CD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 TRP A 338 CE2 - CD2 - CG ANGL. DEV. = -5.0 DEGREES REMARK 500 ARG A 339 NE - CZ - NH1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG A 339 NE - CZ - NH2 ANGL. DEV. = -8.9 DEGREES REMARK 500 ARG A 341 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 TRP A 402 CD1 - CG - CD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 TRP A 402 CE2 - CD2 - CG ANGL. DEV. = -4.8 DEGREES REMARK 500 ARG A 439 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 VAL B 3 CB - CA - C ANGL. DEV. = -13.2 DEGREES REMARK 500 ARG B 7 NE - CZ - NH1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG B 7 NE - CZ - NH2 ANGL. DEV. = -7.3 DEGREES REMARK 500 LEU B 8 CA - C - N ANGL. DEV. = 12.5 DEGREES REMARK 500 LEU B 8 O - C - N ANGL. DEV. = -10.4 DEGREES REMARK 500 TRP B 17 CD1 - CG - CD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 TRP B 17 CB - CG - CD1 ANGL. DEV. = -8.1 DEGREES REMARK 500 TRP B 17 CE2 - CD2 - CG ANGL. DEV. = -6.4 DEGREES REMARK 500 TRP B 17 CG - CD2 - CE3 ANGL. DEV. = 5.5 DEGREES REMARK 500 TRP B 30 CD1 - CG - CD2 ANGL. DEV. = 7.6 DEGREES REMARK 500 TRP B 30 CG - CD1 - NE1 ANGL. DEV. = -6.4 DEGREES REMARK 500 TRP B 30 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 92 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 7 -52.96 69.19 REMARK 500 ARG A 23 82.60 -155.53 REMARK 500 SER A 152 -132.86 59.14 REMARK 500 PHE A 182 -44.90 -132.79 REMARK 500 ASP A 205 52.38 -149.20 REMARK 500 PHE A 280 51.53 -140.83 REMARK 500 PRO A 298 -164.35 -79.69 REMARK 500 ASP A 379 -31.37 66.75 REMARK 500 ASN A 406 40.20 -95.12 REMARK 500 LEU A 410 20.14 -77.87 REMARK 500 LEU A 412 67.31 67.19 REMARK 500 ARG B 7 -56.77 69.87 REMARK 500 ARG B 23 79.12 -153.74 REMARK 500 SER B 152 -123.76 60.13 REMARK 500 ASP B 176 68.36 38.71 REMARK 500 PHE B 182 -34.34 -139.06 REMARK 500 ASP B 205 53.66 -147.49 REMARK 500 ASN B 229 19.26 56.39 REMARK 500 ASN B 334 119.86 -35.73 REMARK 500 ARG B 367 -176.46 -66.06 REMARK 500 ASP B 379 -41.14 76.74 REMARK 500 ASN B 409 -155.08 -145.99 REMARK 500 LEU B 410 -40.99 116.46 REMARK 500 THR B 411 99.34 65.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 333 ASN A 334 -33.89 REMARK 500 SER B 333 ASN B 334 -61.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 71 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 SER A 333 -15.88 REMARK 500 SER B 333 -12.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 960 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 190 O REMARK 620 2 ASP A 192 OD2 100.7 REMARK 620 3 ASP A 195 OD1 137.7 80.5 REMARK 620 4 ASP A 195 OD2 89.8 83.0 48.2 REMARK 620 5 HOH A1261 O 151.7 82.2 70.5 118.4 REMARK 620 6 GLU A 187 O 77.3 87.6 144.4 162.3 74.7 REMARK 620 7 HOH A1074 O 83.1 176.2 96.7 97.2 94.5 93.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 970 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 192 OD2 REMARK 620 2 ASP B 195 OD1 84.2 REMARK 620 3 ASP B 195 OD2 81.7 48.6 REMARK 620 4 HOH B1162 O 89.4 72.7 121.1 REMARK 620 5 ARG B 190 O 93.1 129.5 81.1 157.8 REMARK 620 6 GLU B 187 O 82.0 147.3 154.9 77.6 80.9 REMARK 620 7 HOH B1079 O 173.4 95.7 93.2 96.9 81.9 101.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: ACT REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ACTIVE SITE IN CHAIN A REMARK 800 REMARK 800 SITE_IDENTIFIER: BCT REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ACTIVE SITE IN CHAIN B REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 960 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 970 DBREF 1HPL A 1 449 UNP P29183 LIPP_HORSE 13 461 DBREF 1HPL B 1 449 UNP P29183 LIPP_HORSE 13 461 SEQRES 1 A 449 ASN GLU VAL CYS TYR GLU ARG LEU GLY CYS PHE SER ASP SEQRES 2 A 449 ASP SER PRO TRP ALA GLY ILE VAL GLU ARG PRO LEU LYS SEQRES 3 A 449 ILE LEU PRO TRP SER PRO GLU LYS VAL ASN THR ARG PHE SEQRES 4 A 449 LEU LEU TYR THR ASN GLU ASN PRO ASP ASN PHE GLN GLU SEQRES 5 A 449 ILE VAL ALA ASP PRO SER THR ILE GLN SER SER ASN PHE SEQRES 6 A 449 ASN THR GLY ARG LYS THR ARG PHE ILE ILE HIS GLY PHE SEQRES 7 A 449 ILE ASP LYS GLY GLU GLU SER TRP LEU SER THR MET CYS SEQRES 8 A 449 GLN ASN MET PHE LYS VAL GLU SER VAL ASN CYS ILE CYS SEQRES 9 A 449 VAL ASP TRP LYS SER GLY SER ARG THR ALA TYR SER GLN SEQRES 10 A 449 ALA SER GLN ASN VAL ARG ILE VAL GLY ALA GLU VAL ALA SEQRES 11 A 449 TYR LEU VAL GLY VAL LEU GLN SER SER PHE ASP TYR SER SEQRES 12 A 449 PRO SER ASN VAL HIS ILE ILE GLY HIS SER LEU GLY SER SEQRES 13 A 449 HIS ALA ALA GLY GLU ALA GLY ARG ARG THR ASN GLY ALA SEQRES 14 A 449 VAL GLY ARG ILE THR GLY LEU ASP PRO ALA GLU PRO CYS SEQRES 15 A 449 PHE GLN GLY THR PRO GLU LEU VAL ARG LEU ASP PRO SER SEQRES 16 A 449 ASP ALA GLN PHE VAL ASP VAL ILE HIS THR ASP ILE ALA SEQRES 17 A 449 PRO PHE ILE PRO ASN LEU GLY PHE GLY MET SER GLN THR SEQRES 18 A 449 ALA GLY HIS LEU ASP PHE PHE PRO ASN GLY GLY LYS GLU SEQRES 19 A 449 MET PRO GLY CYS GLN LYS ASN VAL LEU SER GLN ILE VAL SEQRES 20 A 449 ASP ILE ASP GLY ILE TRP GLN GLY THR ARG ASP PHE ALA SEQRES 21 A 449 ALA CYS ASN HIS LEU ARG SER TYR LYS TYR TYR THR ASP SEQRES 22 A 449 SER ILE LEU ASN PRO ASP GLY PHE ALA GLY PHE SER CYS SEQRES 23 A 449 ALA SER TYR SER ASP PHE THR ALA ASN LYS CYS PHE PRO SEQRES 24 A 449 CYS SER SER GLU GLY CYS PRO GLN MET GLY HIS TYR ALA SEQRES 25 A 449 ASP ARG PHE PRO GLY ARG THR LYS GLY VAL GLY GLN LEU SEQRES 26 A 449 PHE TYR LEU ASN THR GLY ASP ALA SER ASN PHE ALA ARG SEQRES 27 A 449 TRP ARG TYR ARG VAL ASP VAL THR LEU SER GLY LYS LYS SEQRES 28 A 449 VAL THR GLY HIS VAL LEU VAL SER LEU PHE GLY ASN LYS SEQRES 29 A 449 GLY ASN SER ARG GLN TYR GLU ILE PHE GLN GLY THR LEU SEQRES 30 A 449 LYS PRO ASP ASN THR TYR SER ASN GLU PHE ASP SER ASP SEQRES 31 A 449 VAL GLU VAL GLY ASP LEU GLU LYS VAL LYS PHE ILE TRP SEQRES 32 A 449 TYR ASN ASN VAL ILE ASN LEU THR LEU PRO LYS VAL GLY SEQRES 33 A 449 ALA SER LYS ILE THR VAL GLU ARG ASN ASP GLY SER VAL SEQRES 34 A 449 PHE ASN PHE CYS SER GLU GLU THR VAL ARG GLU ASP VAL SEQRES 35 A 449 LEU LEU THR LEU THR ALA CYS SEQRES 1 B 449 ASN GLU VAL CYS TYR GLU ARG LEU GLY CYS PHE SER ASP SEQRES 2 B 449 ASP SER PRO TRP ALA GLY ILE VAL GLU ARG PRO LEU LYS SEQRES 3 B 449 ILE LEU PRO TRP SER PRO GLU LYS VAL ASN THR ARG PHE SEQRES 4 B 449 LEU LEU TYR THR ASN GLU ASN PRO ASP ASN PHE GLN GLU SEQRES 5 B 449 ILE VAL ALA ASP PRO SER THR ILE GLN SER SER ASN PHE SEQRES 6 B 449 ASN THR GLY ARG LYS THR ARG PHE ILE ILE HIS GLY PHE SEQRES 7 B 449 ILE ASP LYS GLY GLU GLU SER TRP LEU SER THR MET CYS SEQRES 8 B 449 GLN ASN MET PHE LYS VAL GLU SER VAL ASN CYS ILE CYS SEQRES 9 B 449 VAL ASP TRP LYS SER GLY SER ARG THR ALA TYR SER GLN SEQRES 10 B 449 ALA SER GLN ASN VAL ARG ILE VAL GLY ALA GLU VAL ALA SEQRES 11 B 449 TYR LEU VAL GLY VAL LEU GLN SER SER PHE ASP TYR SER SEQRES 12 B 449 PRO SER ASN VAL HIS ILE ILE GLY HIS SER LEU GLY SER SEQRES 13 B 449 HIS ALA ALA GLY GLU ALA GLY ARG ARG THR ASN GLY ALA SEQRES 14 B 449 VAL GLY ARG ILE THR GLY LEU ASP PRO ALA GLU PRO CYS SEQRES 15 B 449 PHE GLN GLY THR PRO GLU LEU VAL ARG LEU ASP PRO SER SEQRES 16 B 449 ASP ALA GLN PHE VAL ASP VAL ILE HIS THR ASP ILE ALA SEQRES 17 B 449 PRO PHE ILE PRO ASN LEU GLY PHE GLY MET SER GLN THR SEQRES 18 B 449 ALA GLY HIS LEU ASP PHE PHE PRO ASN GLY GLY LYS GLU SEQRES 19 B 449 MET PRO GLY CYS GLN LYS ASN VAL LEU SER GLN ILE VAL SEQRES 20 B 449 ASP ILE ASP GLY ILE TRP GLN GLY THR ARG ASP PHE ALA SEQRES 21 B 449 ALA CYS ASN HIS LEU ARG SER TYR LYS TYR TYR THR ASP SEQRES 22 B 449 SER ILE LEU ASN PRO ASP GLY PHE ALA GLY PHE SER CYS SEQRES 23 B 449 ALA SER TYR SER ASP PHE THR ALA ASN LYS CYS PHE PRO SEQRES 24 B 449 CYS SER SER GLU GLY CYS PRO GLN MET GLY HIS TYR ALA SEQRES 25 B 449 ASP ARG PHE PRO GLY ARG THR LYS GLY VAL GLY GLN LEU SEQRES 26 B 449 PHE TYR LEU ASN THR GLY ASP ALA SER ASN PHE ALA ARG SEQRES 27 B 449 TRP ARG TYR ARG VAL ASP VAL THR LEU SER GLY LYS LYS SEQRES 28 B 449 VAL THR GLY HIS VAL LEU VAL SER LEU PHE GLY ASN LYS SEQRES 29 B 449 GLY ASN SER ARG GLN TYR GLU ILE PHE GLN GLY THR LEU SEQRES 30 B 449 LYS PRO ASP ASN THR TYR SER ASN GLU PHE ASP SER ASP SEQRES 31 B 449 VAL GLU VAL GLY ASP LEU GLU LYS VAL LYS PHE ILE TRP SEQRES 32 B 449 TYR ASN ASN VAL ILE ASN LEU THR LEU PRO LYS VAL GLY SEQRES 33 B 449 ALA SER LYS ILE THR VAL GLU ARG ASN ASP GLY SER VAL SEQRES 34 B 449 PHE ASN PHE CYS SER GLU GLU THR VAL ARG GLU ASP VAL SEQRES 35 B 449 LEU LEU THR LEU THR ALA CYS HET CA A 960 1 HET CA B 970 1 HETNAM CA CALCIUM ION FORMUL 3 CA 2(CA 2+) FORMUL 5 HOH *705(H2 O) HELIX 1 AA PRO A 31 VAL A 34 1 4 HELIX 2 BA PRO A 56 SER A 61 1 6 HELIX 3 CA TRP A 85 MET A 93 1 9 HELIX 4 DA LYS A 107 SER A 110 1 4 HELIX 5 EA TYR A 114 PHE A 139 1 26 HELIX 6 FA SER A 155 THR A 165 1 11 HELIX 7 GA ILE A 248 TRP A 252 1ONE-TURN HELIX AT ACTIVE SITE 5 HELIX 8 HA CYS A 261 SER A 273 1 13 HELIX 9 IA TYR A 288 THR A 292 1 5 HELIX 10 AB PRO B 31 VAL B 34 1 4 HELIX 11 BB PRO B 56 SER B 61 1 6 HELIX 12 CB TRP B 85 MET B 93 1 9 HELIX 13 DB LYS B 107 SER B 110 1 4 HELIX 14 EB TYR B 114 PHE B 139 1 26 HELIX 15 FB SER B 155 THR B 165 1 11 HELIX 16 GB ILE B 248 TRP B 252 1ONE-TURN HELIX AT ACTIVE SITE 5 HELIX 17 HB CYS B 261 SER B 273 1 13 HELIX 18 IB TYR B 288 THR B 292 1 5 SHEET 1 AA 2 VAL A 3 TYR A 5 0 SHEET 2 AA 2 GLY A 9 PHE A 11 -1 SHEET 1 BA 9 ARG A 37 THR A 42 0 SHEET 2 BA 9 ASN A 45 GLU A 51 -1 SHEET 3 BA 9 THR A 70 ILE A 74 -1 SHEET 4 BA 9 ASN A 100 ASP A 105 1 SHEET 5 BA 9 VAL A 146 HIS A 151 1 SHEET 6 BA 9 ARG A 171 LEU A 175 1 SHEET 7 BA 9 VAL A 199 ILE A 202 1 SHEET 8 BA 9 LEU A 224 PHE A 226 1 SHEET 9 BA 9 GLN A 323 PHE A 325 1 SHEET 1 CA 4 TRP A 338 GLY A 348 0 SHEET 2 CA 4 THR A 381 SER A 388 -1 SHEET 3 CA 4 VAL A 415 GLU A 423 -1 SHEET 4 CA 4 VAL A 429 CYS A 433 -1 SHEET 1 DA 4 VAL A 351 GLY A 361 0 SHEET 2 DA 4 TYR A 369 LEU A 376 -1 SHEET 3 DA 4 LEU A 395 ASN A 406 -1 SHEET 4 DA 4 LEU A 444 LEU A 446 -1 SHEET 1 AB 2 VAL B 3 TYR B 5 0 SHEET 2 AB 2 GLY B 9 PHE B 11 -1 SHEET 1 BB 9 ARG B 37 THR B 42 0 SHEET 2 BB 9 ASN B 45 GLU B 51 -1 SHEET 3 BB 9 THR B 70 ILE B 74 -1 SHEET 4 BB 9 ASN B 100 ASP B 105 1 SHEET 5 BB 9 VAL B 146 HIS B 151 1 SHEET 6 BB 9 ARG B 171 LEU B 175 1 SHEET 7 BB 9 VAL B 199 ILE B 202 1 SHEET 8 BB 9 LEU B 224 PHE B 226 1 SHEET 9 BB 9 GLN B 323 PHE B 325 1 SHEET 1 CB 4 TRP B 338 GLY B 348 0 SHEET 2 CB 4 THR B 381 SER B 388 -1 SHEET 3 CB 4 VAL B 415 GLU B 423 -1 SHEET 4 CB 4 VAL B 429 CYS B 433 -1 SHEET 1 DB 4 VAL B 351 GLY B 361 0 SHEET 2 DB 4 TYR B 369 LEU B 376 -1 SHEET 3 DB 4 LEU B 395 ASN B 406 -1 SHEET 4 DB 4 LEU B 444 LEU B 446 -1 SSBOND 1 CYS A 4 CYS A 10 1555 1555 2.03 SSBOND 2 CYS A 90 CYS A 101 1555 1555 2.03 SSBOND 3 CYS A 237 CYS A 261 1555 1555 2.02 SSBOND 4 CYS A 285 CYS A 296 1555 1555 2.02 SSBOND 5 CYS A 299 CYS A 304 1555 1555 2.02 SSBOND 6 CYS A 433 CYS A 449 1555 1555 2.02 SSBOND 7 CYS B 4 CYS B 10 1555 1555 2.03 SSBOND 8 CYS B 90 CYS B 101 1555 1555 2.04 SSBOND 9 CYS B 237 CYS B 261 1555 1555 2.03 SSBOND 10 CYS B 285 CYS B 296 1555 1555 2.02 SSBOND 11 CYS B 299 CYS B 304 1555 1555 2.03 SSBOND 12 CYS B 433 CYS B 449 1555 1555 2.01 LINK CA CA A 960 O ARG A 190 1555 1555 2.18 LINK CA CA A 960 OD2 ASP A 192 1555 1555 2.36 LINK CA CA A 960 OD1 ASP A 195 1555 1555 2.66 LINK CA CA A 960 OD2 ASP A 195 1555 1555 2.57 LINK CA CA A 960 O HOH A1261 1555 1555 2.19 LINK CA CA A 960 O GLU A 187 1555 1555 2.23 LINK CA CA A 960 O HOH A1074 1555 1555 2.42 LINK CA CA B 970 OD2 ASP B 192 1555 1555 2.55 LINK CA CA B 970 OD1 ASP B 195 1555 1555 2.62 LINK CA CA B 970 OD2 ASP B 195 1555 1555 2.70 LINK CA CA B 970 O HOH B1162 1555 1555 2.29 LINK CA CA B 970 O ARG B 190 1555 1555 2.17 LINK CA CA B 970 O GLU B 187 1555 1555 2.21 LINK CA CA B 970 O HOH B1079 1555 1555 2.20 CISPEP 1 SER A 15 PRO A 16 0 4.49 CISPEP 2 ILE A 210 PRO A 211 0 -1.09 CISPEP 3 PHE A 297 PRO A 298 0 -7.68 CISPEP 4 SER B 15 PRO B 16 0 9.12 CISPEP 5 ILE B 210 PRO B 211 0 3.08 CISPEP 6 PHE B 297 PRO B 298 0 -4.73 SITE 1 ACT 3 SER A 152 ASP A 176 HIS A 263 SITE 1 BCT 3 SER B 152 ASP B 176 HIS B 263 SITE 1 AC1 6 GLU A 187 ARG A 190 ASP A 192 ASP A 195 SITE 2 AC1 6 HOH A1074 HOH A1261 SITE 1 AC2 6 GLU B 187 ARG B 190 ASP B 192 ASP B 195 SITE 2 AC2 6 HOH B1079 HOH B1162 CRYST1 79.800 97.200 145.300 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012531 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010288 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006882 0.00000 MTRIX1 1 -0.999900 -0.001100 0.002900 79.35000 1 MTRIX2 1 -0.001100 0.998660 -0.050000 2.02820 1 MTRIX3 1 -0.002300 -0.050200 -0.998000 61.23560 1