PDB Short entry for 1HRF HEADER GROWTH FACTOR 21-JUL-94 1HRF TITLE SOLUTION STRUCTURE OF THE EPIDERMAL GROWTH FACTOR-LIKE DOMAIN OF TITLE 2 HEREGULIN-ALPHA, A LIGAND FOR P180ERB4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEREGULIN ALPHA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS GROWTH FACTOR EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR K.NAGATA,D.KOHDA,H.HATANAKA,S.ICHIKAWA,F.INAGAKI REVDAT 3 29-NOV-17 1HRF 1 REMARK HELIX REVDAT 2 24-FEB-09 1HRF 1 VERSN REVDAT 1 15-OCT-94 1HRF 0 JRNL AUTH K.NAGATA,D.KOHDA,H.HATANAKA,S.ICHIKAWA,S.MATSUDA,T.YAMAMOTO, JRNL AUTH 2 A.SUZUKI,F.INAGAKI JRNL TITL SOLUTION STRUCTURE OF THE EPIDERMAL GROWTH FACTOR-LIKE JRNL TITL 2 DOMAIN OF HEREGULIN-ALPHA, A LIGAND FOR P180ERBB-4. JRNL REF EMBO J. V. 13 3517 1994 JRNL REFN ISSN 0261-4189 JRNL PMID 8062828 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HRF COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000173974. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS A 187 O CYS A 190 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 1 HIS A 178 CG HIS A 178 ND1 -0.100 REMARK 500 2 HIS A 178 CG HIS A 178 ND1 -0.101 REMARK 500 3 HIS A 178 CG HIS A 178 ND1 -0.101 REMARK 500 4 HIS A 178 CG HIS A 178 ND1 -0.104 REMARK 500 5 HIS A 178 CG HIS A 178 ND1 -0.103 REMARK 500 6 HIS A 178 CG HIS A 178 ND1 -0.102 REMARK 500 7 HIS A 178 CG HIS A 178 ND1 -0.104 REMARK 500 8 HIS A 178 CG HIS A 178 ND1 -0.100 REMARK 500 9 HIS A 178 CG HIS A 178 ND1 -0.100 REMARK 500 10 HIS A 178 CG HIS A 178 ND1 -0.103 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 177 32.77 -177.65 REMARK 500 1 HIS A 178 44.58 -100.35 REMARK 500 1 LEU A 179 -177.26 -66.46 REMARK 500 1 VAL A 180 -26.35 -147.46 REMARK 500 1 LYS A 181 146.70 51.68 REMARK 500 1 CYS A 182 -155.04 -78.46 REMARK 500 1 GLU A 186 11.60 -142.95 REMARK 500 1 LYS A 187 48.88 -74.18 REMARK 500 1 VAL A 191 -88.14 -55.43 REMARK 500 1 ASN A 192 -154.03 -81.36 REMARK 500 1 LYS A 200 51.45 -116.72 REMARK 500 1 LEU A 202 172.81 60.79 REMARK 500 1 PRO A 205 -166.38 -72.70 REMARK 500 1 LEU A 209 -168.50 -123.69 REMARK 500 1 CYS A 210 99.44 -163.19 REMARK 500 1 PRO A 214 91.27 -45.20 REMARK 500 1 THR A 217 -164.40 -163.46 REMARK 500 1 ALA A 219 -94.49 -158.09 REMARK 500 1 ASN A 224 83.61 -59.38 REMARK 500 1 VAL A 225 126.61 -32.26 REMARK 500 1 PRO A 226 34.94 -73.26 REMARK 500 1 LYS A 228 130.76 -171.75 REMARK 500 1 ASN A 231 -111.97 -50.10 REMARK 500 1 GLU A 233 -141.34 -175.30 REMARK 500 1 LYS A 234 -5.79 -175.21 REMARK 500 1 ALA A 235 68.37 -158.43 REMARK 500 1 GLU A 236 -17.99 -170.23 REMARK 500 1 GLU A 237 -155.84 -67.60 REMARK 500 1 TYR A 239 105.45 33.04 REMARK 500 1 GLN A 240 -82.56 41.62 REMARK 500 2 LYS A 181 138.16 53.95 REMARK 500 2 CYS A 182 -156.70 -65.72 REMARK 500 2 ALA A 183 -137.74 -142.33 REMARK 500 2 VAL A 191 -101.56 -112.18 REMARK 500 2 ASN A 192 -146.28 -75.08 REMARK 500 2 LYS A 200 75.96 -59.56 REMARK 500 2 ASP A 201 85.58 -40.81 REMARK 500 2 SER A 203 -87.89 -138.95 REMARK 500 2 ASN A 204 44.65 -167.70 REMARK 500 2 PRO A 205 -80.93 -68.24 REMARK 500 2 SER A 206 100.08 55.64 REMARK 500 2 PRO A 214 104.17 -49.53 REMARK 500 2 ALA A 219 -71.12 -170.51 REMARK 500 2 CYS A 221 52.66 72.67 REMARK 500 2 ASN A 224 94.19 34.63 REMARK 500 2 VAL A 225 137.93 -30.30 REMARK 500 2 PRO A 226 75.69 -46.12 REMARK 500 2 LYS A 228 109.40 11.78 REMARK 500 2 ASN A 231 179.29 59.38 REMARK 500 2 ALA A 235 -10.60 -140.91 REMARK 500 REMARK 500 THIS ENTRY HAS 249 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 207 0.24 SIDE CHAIN REMARK 500 1 ARG A 220 0.30 SIDE CHAIN REMARK 500 2 ARG A 207 0.15 SIDE CHAIN REMARK 500 2 ARG A 220 0.17 SIDE CHAIN REMARK 500 3 ARG A 207 0.32 SIDE CHAIN REMARK 500 3 ARG A 220 0.32 SIDE CHAIN REMARK 500 4 ARG A 220 0.16 SIDE CHAIN REMARK 500 5 ARG A 207 0.13 SIDE CHAIN REMARK 500 6 ARG A 220 0.22 SIDE CHAIN REMARK 500 7 ARG A 207 0.29 SIDE CHAIN REMARK 500 7 ARG A 220 0.32 SIDE CHAIN REMARK 500 8 ARG A 220 0.10 SIDE CHAIN REMARK 500 9 ARG A 207 0.31 SIDE CHAIN REMARK 500 9 ARG A 220 0.23 SIDE CHAIN REMARK 500 10 ARG A 207 0.32 SIDE CHAIN REMARK 500 10 ARG A 220 0.32 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1HRE RELATED DB: PDB DBREF 1HRF A 175 241 UNP Q02297 NRG1_HUMAN 174 240 SEQRES 1 A 67 GLY THR SER HIS LEU VAL LYS CYS ALA GLU LYS GLU LYS SEQRES 2 A 67 THR PHE CYS VAL ASN GLY GLY GLU CYS PHE MET VAL LYS SEQRES 3 A 67 ASP LEU SER ASN PRO SER ARG TYR LEU CYS LYS CYS GLN SEQRES 4 A 67 PRO GLY PHE THR GLY ALA ARG CYS THR GLU ASN VAL PRO SEQRES 5 A 67 MET LYS VAL GLN ASN GLN GLU LYS ALA GLU GLU LEU TYR SEQRES 6 A 67 GLN LYS SHEET 1 B1 3 LEU A 179 CYS A 182 0 SHEET 2 B1 3 GLY A 194 VAL A 199 -1 O MET A 198 N VAL A 180 SHEET 3 B1 3 ARG A 207 GLN A 213 -1 O LYS A 211 N GLU A 195 SHEET 1 B2 2 PHE A 216 THR A 217 0 SHEET 2 B2 2 GLU A 223 ASN A 224 -1 O GLU A 223 N THR A 217 SSBOND 1 CYS A 182 CYS A 196 1555 1555 2.02 SSBOND 2 CYS A 190 CYS A 210 1555 1555 2.02 SSBOND 3 CYS A 212 CYS A 221 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000