PDB Short entry for 1HW2 HEADER TRANSCRIPTION/DNA 09-JAN-01 1HW2 TITLE FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN TITLE 2 ECHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*CP*GP*AP*TP*CP*TP*GP*GP*TP*CP*CP*GP*AP*CP*CP*AP*GP*AP COMPND 3 *TP*GP*CP*T)-3'; COMPND 4 CHAIN: D; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: 5'-D(*G*CP*AP*TP*CP*TP*GP*GP*TP*CP*GP*GP*AP*CP*CP*AP*GP*AP* COMPND 8 TP*CP*GP*A)-3'; COMPND 9 CHAIN: E; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: FATTY ACID METABOLISM REGULATOR PROTEIN; COMPND 13 CHAIN: A, B; COMPND 14 SYNONYM: FADR; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES; SOURCE 5 MOL_ID: 3; SOURCE 6 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 7 ORGANISM_TAXID: 562; SOURCE 8 GENE: FADR; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 11 EXPRESSION_SYSTEM_STRAIN: UB1005; SOURCE 12 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: PPJ139 KEYWDS HELIX-TURN-HELIX, HELIX BUNDLE, PROTEIN-DNA COMPLEX, TRANSCRIPTION- KEYWDS 2 DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.XU,R.J.HEATH,Z.LI,C.O.ROCK,S.W.WHITE REVDAT 6 03-APR-24 1HW2 1 REMARK REVDAT 5 07-FEB-24 1HW2 1 REMARK REVDAT 4 24-FEB-09 1HW2 1 VERSN REVDAT 3 01-APR-03 1HW2 1 JRNL REVDAT 2 04-JUN-01 1HW2 1 JRNL REVDAT 1 22-JAN-01 1HW2 0 JRNL AUTH Y.XU,R.J.HEATH,Z.LI,C.O.ROCK,S.W.WHITE JRNL TITL THE FADR.DNA COMPLEX. TRANSCRIPTIONAL CONTROL OF FATTY ACID JRNL TITL 2 METABOLISM IN ESCHERICHIA COLI. JRNL REF J.BIOL.CHEM. V. 276 17373 2001 JRNL REFN ISSN 0021-9258 JRNL PMID 11279025 JRNL DOI 10.1074/JBC.M100195200 REMARK 2 REMARK 2 RESOLUTION. 3.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 17670 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 898 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.37 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3037 REMARK 3 BIN FREE R VALUE : 0.3580 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 74 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3520 REMARK 3 NUCLEIC ACID ATOMS : 773 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.66700 REMARK 3 B22 (A**2) : -8.07700 REMARK 3 B33 (A**2) : 14.74500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.260 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 19.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.700 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : GROUPED-B REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HW2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JAN-01. REMARK 100 THE DEPOSITION ID IS D_1000012620. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-SEP-00 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20310 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.34600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NATIVE FADR DIMER REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ISOPROPANOL, MES, MAGNESIUM CHLORIDE, REMARK 280 PH 6.0, EVAPORATION, TEMPERATURE 290.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 41.86650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.14050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.07400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.14050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.86650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.07400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DC D 21 REMARK 465 DT D 22 REMARK 465 DG E 1 REMARK 465 DC E 20 REMARK 465 DG E 21 REMARK 465 DA E 22 REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 ILE A 3 REMARK 465 LYS A 4 REMARK 465 ALA A 5 REMARK 465 GLN A 6 REMARK 465 ASN A 229 REMARK 465 LEU A 230 REMARK 465 PRO A 231 REMARK 465 GLY A 232 REMARK 465 ASP A 233 REMARK 465 LEU A 234 REMARK 465 ALA A 235 REMARK 465 ILE A 236 REMARK 465 GLN A 237 REMARK 465 GLY A 238 REMARK 465 ARG A 239 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 ILE B 3 REMARK 465 LYS B 4 REMARK 465 ALA B 5 REMARK 465 GLN B 6 REMARK 465 ASN B 229 REMARK 465 LEU B 230 REMARK 465 PRO B 231 REMARK 465 GLY B 232 REMARK 465 ASP B 233 REMARK 465 LEU B 234 REMARK 465 ALA B 235 REMARK 465 ILE B 236 REMARK 465 GLN B 237 REMARK 465 GLY B 238 REMARK 465 ARG B 239 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DC E 2 P OP1 OP2 REMARK 470 GLN A 64 CG CD OE1 NE2 REMARK 470 LYS A 67 CG CD CE NZ REMARK 470 HIS A 205 CG ND1 CD2 CE1 NE2 REMARK 470 ASP A 206 CG OD1 OD2 REMARK 470 LYS A 228 CG CD CE NZ REMARK 470 GLN B 64 CG CD OE1 NE2 REMARK 470 LYS B 67 CG CD CE NZ REMARK 470 HIS B 205 CG ND1 CD2 CE1 NE2 REMARK 470 ASP B 206 CG OD1 OD2 REMARK 470 LYS B 228 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OP2 DG D 8 NH2 ARG B 49 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA E 3 O3' DA E 3 C3' -0.038 REMARK 500 DG E 12 O3' DG E 12 C3' -0.043 REMARK 500 DG E 12 C2 DG E 12 N2 -0.090 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG D 8 O5' - P - OP2 ANGL. DEV. = -8.8 DEGREES REMARK 500 DG D 8 C5' - C4' - O4' ANGL. DEV. = 16.2 DEGREES REMARK 500 DG D 8 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DC E 2 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DA E 3 O3' - P - OP1 ANGL. DEV. = 7.9 DEGREES REMARK 500 DG E 11 C3' - C2' - C1' ANGL. DEV. = -5.9 DEGREES REMARK 500 DG E 12 O5' - P - OP2 ANGL. DEV. = -5.7 DEGREES REMARK 500 DG E 12 C1' - O4' - C4' ANGL. DEV. = -6.0 DEGREES REMARK 500 DG E 12 C3' - C2' - C1' ANGL. DEV. = -5.7 DEGREES REMARK 500 DG E 12 O4' - C1' - C2' ANGL. DEV. = 6.5 DEGREES REMARK 500 DG E 12 N9 - C1' - C2' ANGL. DEV. = 18.6 DEGREES REMARK 500 DG E 12 O4' - C1' - N9 ANGL. DEV. = 4.5 DEGREES REMARK 500 DG E 12 N3 - C2 - N2 ANGL. DEV. = -4.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 8 -71.19 -47.28 REMARK 500 ASN A 23 45.42 13.72 REMARK 500 ALA A 33 145.42 -39.46 REMARK 500 HIS A 65 118.79 -35.95 REMARK 500 VAL A 94 -61.27 -22.09 REMARK 500 THR A 106 -77.88 -46.66 REMARK 500 GLU A 133 74.07 38.29 REMARK 500 ASP A 136 31.83 -98.89 REMARK 500 ALA A 138 -70.45 -43.35 REMARK 500 ALA A 142 -60.50 -26.57 REMARK 500 ALA A 155 4.29 -64.12 REMARK 500 LYS A 169 -71.50 -39.96 REMARK 500 ALA A 204 31.25 -79.62 REMARK 500 HIS A 205 -29.92 -33.68 REMARK 500 THR A 211 -70.60 -66.56 REMARK 500 ASN B 23 40.57 24.64 REMARK 500 HIS B 65 122.65 -38.10 REMARK 500 LEU B 80 -8.92 -48.61 REMARK 500 LEU B 86 -6.83 -58.31 REMARK 500 VAL B 94 -65.17 -26.60 REMARK 500 THR B 106 -70.52 -46.66 REMARK 500 HIS B 120 59.51 -143.01 REMARK 500 GLU B 133 74.75 38.05 REMARK 500 ASP B 136 32.63 -96.41 REMARK 500 ALA B 138 -71.59 -45.90 REMARK 500 ALA B 140 -74.86 -55.43 REMARK 500 ALA B 142 -55.98 -26.45 REMARK 500 ASN B 158 79.42 -104.89 REMARK 500 PHE B 180 5.44 -69.82 REMARK 500 GLU B 202 0.84 -65.47 REMARK 500 ALA B 204 30.82 -72.71 REMARK 500 HIS B 205 -29.27 -28.25 REMARK 500 THR B 211 -71.49 -67.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DC D 5 0.10 SIDE CHAIN REMARK 500 DT D 6 0.07 SIDE CHAIN REMARK 500 DT E 4 0.07 SIDE CHAIN REMARK 500 DC E 5 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG E 23 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1HW1 RELATED DB: PDB REMARK 900 NATIVE FADR DBREF 1HW2 A 1 239 UNP P0A8V6 FADR_ECOLI 1 239 DBREF 1HW2 B 1 239 UNP P0A8V6 FADR_ECOLI 1 239 DBREF 1HW2 D 1 22 PDB 1HW2 1HW2 1 22 DBREF 1HW2 E 1 22 PDB 1HW2 1HW2 1 22 SEQRES 1 D 22 DC DG DA DT DC DT DG DG DT DC DC DG DA SEQRES 2 D 22 DC DC DA DG DA DT DG DC DT SEQRES 1 E 22 DG DC DA DT DC DT DG DG DT DC DG DG DA SEQRES 2 E 22 DC DC DA DG DA DT DC DG DA SEQRES 1 A 239 MET VAL ILE LYS ALA GLN SER PRO ALA GLY PHE ALA GLU SEQRES 2 A 239 GLU TYR ILE ILE GLU SER ILE TRP ASN ASN ARG PHE PRO SEQRES 3 A 239 PRO GLY THR ILE LEU PRO ALA GLU ARG GLU LEU SER GLU SEQRES 4 A 239 LEU ILE GLY VAL THR ARG THR THR LEU ARG GLU VAL LEU SEQRES 5 A 239 GLN ARG LEU ALA ARG ASP GLY TRP LEU THR ILE GLN HIS SEQRES 6 A 239 GLY LYS PRO THR LYS VAL ASN ASN PHE TRP GLU THR SER SEQRES 7 A 239 GLY LEU ASN ILE LEU GLU THR LEU ALA ARG LEU ASP HIS SEQRES 8 A 239 GLU SER VAL PRO GLN LEU ILE ASP ASN LEU LEU SER VAL SEQRES 9 A 239 ARG THR ASN ILE SER THR ILE PHE ILE ARG THR ALA PHE SEQRES 10 A 239 ARG GLN HIS PRO ASP LYS ALA GLN GLU VAL LEU ALA THR SEQRES 11 A 239 ALA ASN GLU VAL ALA ASP HIS ALA ASP ALA PHE ALA GLU SEQRES 12 A 239 LEU ASP TYR ASN ILE PHE ARG GLY LEU ALA PHE ALA SER SEQRES 13 A 239 GLY ASN PRO ILE TYR GLY LEU ILE LEU ASN GLY MET LYS SEQRES 14 A 239 GLY LEU TYR THR ARG ILE GLY ARG HIS TYR PHE ALA ASN SEQRES 15 A 239 PRO GLU ALA ARG SER LEU ALA LEU GLY PHE TYR HIS LYS SEQRES 16 A 239 LEU SER ALA LEU CYS SER GLU GLY ALA HIS ASP GLN VAL SEQRES 17 A 239 TYR GLU THR VAL ARG ARG TYR GLY HIS GLU SER GLY GLU SEQRES 18 A 239 ILE TRP HIS ARG MET GLN LYS ASN LEU PRO GLY ASP LEU SEQRES 19 A 239 ALA ILE GLN GLY ARG SEQRES 1 B 239 MET VAL ILE LYS ALA GLN SER PRO ALA GLY PHE ALA GLU SEQRES 2 B 239 GLU TYR ILE ILE GLU SER ILE TRP ASN ASN ARG PHE PRO SEQRES 3 B 239 PRO GLY THR ILE LEU PRO ALA GLU ARG GLU LEU SER GLU SEQRES 4 B 239 LEU ILE GLY VAL THR ARG THR THR LEU ARG GLU VAL LEU SEQRES 5 B 239 GLN ARG LEU ALA ARG ASP GLY TRP LEU THR ILE GLN HIS SEQRES 6 B 239 GLY LYS PRO THR LYS VAL ASN ASN PHE TRP GLU THR SER SEQRES 7 B 239 GLY LEU ASN ILE LEU GLU THR LEU ALA ARG LEU ASP HIS SEQRES 8 B 239 GLU SER VAL PRO GLN LEU ILE ASP ASN LEU LEU SER VAL SEQRES 9 B 239 ARG THR ASN ILE SER THR ILE PHE ILE ARG THR ALA PHE SEQRES 10 B 239 ARG GLN HIS PRO ASP LYS ALA GLN GLU VAL LEU ALA THR SEQRES 11 B 239 ALA ASN GLU VAL ALA ASP HIS ALA ASP ALA PHE ALA GLU SEQRES 12 B 239 LEU ASP TYR ASN ILE PHE ARG GLY LEU ALA PHE ALA SER SEQRES 13 B 239 GLY ASN PRO ILE TYR GLY LEU ILE LEU ASN GLY MET LYS SEQRES 14 B 239 GLY LEU TYR THR ARG ILE GLY ARG HIS TYR PHE ALA ASN SEQRES 15 B 239 PRO GLU ALA ARG SER LEU ALA LEU GLY PHE TYR HIS LYS SEQRES 16 B 239 LEU SER ALA LEU CYS SER GLU GLY ALA HIS ASP GLN VAL SEQRES 17 B 239 TYR GLU THR VAL ARG ARG TYR GLY HIS GLU SER GLY GLU SEQRES 18 B 239 ILE TRP HIS ARG MET GLN LYS ASN LEU PRO GLY ASP LEU SEQRES 19 B 239 ALA ILE GLN GLY ARG HET MG E 23 1 HETNAM MG MAGNESIUM ION FORMUL 5 MG MG 2+ HELIX 1 1 SER A 7 ASN A 22 1 16 HELIX 2 2 ALA A 33 GLY A 42 1 10 HELIX 3 3 THR A 44 ASP A 58 1 15 HELIX 4 4 ASN A 73 SER A 78 1 6 HELIX 5 5 GLY A 79 LEU A 83 5 5 HELIX 6 6 GLU A 84 LEU A 89 1 6 HELIX 7 7 SER A 93 HIS A 120 1 28 HELIX 8 8 HIS A 120 THR A 130 1 11 HELIX 9 9 HIS A 137 ALA A 155 1 19 HELIX 10 10 ASN A 158 PHE A 180 1 23 HELIX 11 11 ASN A 182 GLU A 202 1 21 HELIX 12 12 ALA A 204 ASP A 206 5 3 HELIX 13 13 GLN A 207 LYS A 228 1 22 HELIX 14 14 SER B 7 ASN B 22 1 16 HELIX 15 15 ALA B 33 GLY B 42 1 10 HELIX 16 16 THR B 44 GLY B 59 1 16 HELIX 17 17 ASN B 73 SER B 78 1 6 HELIX 18 18 GLY B 79 ASN B 81 5 3 HELIX 19 19 ILE B 82 ASP B 90 1 9 HELIX 20 20 SER B 93 HIS B 120 1 28 HELIX 21 21 HIS B 120 ALA B 129 1 10 HELIX 22 22 THR B 130 ASN B 132 5 3 HELIX 23 23 HIS B 137 ALA B 155 1 19 HELIX 24 24 ASN B 158 PHE B 180 1 23 HELIX 25 25 ASN B 182 GLU B 202 1 21 HELIX 26 26 GLN B 207 LYS B 228 1 22 SHEET 1 A 2 LEU A 61 GLN A 64 0 SHEET 2 A 2 LYS A 67 VAL A 71 -1 N LYS A 67 O GLN A 64 SHEET 1 B 2 LEU B 61 THR B 62 0 SHEET 2 B 2 LYS B 70 VAL B 71 -1 N LYS B 70 O THR B 62 SITE 1 AC1 2 GLU A 36 GLU B 221 CRYST1 83.733 110.148 130.281 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011943 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009079 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007676 0.00000