PDB Short entry for 1IU1 HEADER ENDOCYTOSIS 19-FEB-02 1IU1 TITLE CRYSTAL STRUCTURE OF HUMAN GAMMA1-ADAPTIN EAR DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GAMMA1-ADAPTIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: EAR DOMAIN; COMPND 5 SYNONYM: ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA 1 SUBUNIT; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PGEX4T-2 KEYWDS COATED PITS, ENDOCYTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR T.NOGI,Y.SHIBA,M.KAWASAKI,T.SHIBA,N.MATSUGAKI,N.IGARASHI,M.SUZUKI, AUTHOR 2 R.KATO,H.TAKATSU,K.NAKAYAMA,S.WAKATSUKI REVDAT 5 27-DEC-23 1IU1 1 REMARK REVDAT 4 23-OCT-19 1IU1 1 JRNL REVDAT 3 13-MAY-08 1IU1 1 REMARK VERSN REVDAT 2 07-JAN-03 1IU1 1 REMARK REVDAT 1 10-JUL-02 1IU1 0 JRNL AUTH T.NOGI,Y.SHIBA,M.KAWASAKI,T.SHIBA,N.MATSUGAKI,N.IGARASHI, JRNL AUTH 2 M.SUZUKI,R.KATO,H.TAKATSU,K.NAKAYAMA,S.WAKATSUKI JRNL TITL STRUCTURAL BASIS FOR THE ACCESSORY PROTEIN RECRUITMENT BY JRNL TITL 2 THE GAMMA-ADAPTIN EAR DOMAIN. JRNL REF NAT.STRUCT.BIOL. V. 9 527 2002 JRNL REFN ISSN 1072-8368 JRNL PMID 12042876 JRNL DOI 10.1038/NSB808 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 26023 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1363 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1884 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2690 REMARK 3 BIN FREE R VALUE SET COUNT : 94 REMARK 3 BIN FREE R VALUE : 0.3210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1898 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 132 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.05000 REMARK 3 B22 (A**2) : -0.05000 REMARK 3 B33 (A**2) : 0.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.140 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.091 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.849 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1936 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2633 ; 1.331 ; 1.942 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 241 ; 4.123 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 365 ;18.209 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 312 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1444 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 798 ; 0.210 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 255 ; 0.127 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 21 ; 0.218 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.216 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1223 ; 0.836 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2007 ; 1.610 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 713 ; 2.324 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 626 ; 4.088 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1IU1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-FEB-02. REMARK 100 THE DEPOSITION ID IS D_1000005274. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-SEP-01; 18-SEP-01; 12-DEC-01 REMARK 200 TEMPERATURE (KELVIN) : 100; 100; 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 3 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y; Y REMARK 200 RADIATION SOURCE : SPRING-8; SPRING-8; PHOTON REMARK 200 FACTORY REMARK 200 BEAMLINE : BL44XU; BL44XU; BL-6A REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL; NULL; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.900; 0.900; 0.96, 0.9778, REMARK 200 0.9785 REMARK 200 MONOCHROMATOR : NULL; NULL; NULL REMARK 200 OPTICS : NULL; NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD; CCD REMARK 200 DETECTOR MANUFACTURER : OXFORD PX210; OXFORD PX210; ADSC REMARK 200 QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27518 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 57.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL; NULL; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000, MAGNESIUM CHLORIDE, HEPES, PH REMARK 280 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.93450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 31.06600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 31.06600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 110.90175 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 31.06600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 31.06600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 36.96725 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 31.06600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.06600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 110.90175 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 31.06600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.06600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 36.96725 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 73.93450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 677 REMARK 465 VAL A 678 REMARK 465 PRO A 679 REMARK 465 GLN A 680 REMARK 465 ILE A 681 REMARK 465 SER A 682 REMARK 465 GLN A 683 REMARK 465 PRO A 684 REMARK 465 HIS A 685 REMARK 465 PHE A 686 REMARK 465 LEU A 687 REMARK 465 LEU A 688 REMARK 465 ASP A 689 REMARK 465 GLY A 690 REMARK 465 LEU A 691 REMARK 465 SER A 692 REMARK 465 SER A 693 REMARK 465 GLN A 694 REMARK 465 PRO A 695 REMARK 465 LEU A 696 REMARK 465 PHE A 697 REMARK 465 ASN A 698 REMARK 465 ASP A 699 REMARK 465 ILE A 700 REMARK 465 ALA A 701 REMARK 465 ALA A 702 REMARK 465 SER B 677 REMARK 465 VAL B 678 REMARK 465 PRO B 679 REMARK 465 GLN B 680 REMARK 465 ILE B 681 REMARK 465 SER B 682 REMARK 465 GLN B 683 REMARK 465 PRO B 684 REMARK 465 HIS B 685 REMARK 465 PHE B 686 REMARK 465 LEU B 687 REMARK 465 LEU B 688 REMARK 465 ASP B 689 REMARK 465 GLY B 690 REMARK 465 LEU B 691 REMARK 465 SER B 692 REMARK 465 SER B 693 REMARK 465 GLN B 694 REMARK 465 PRO B 695 REMARK 465 LEU B 696 REMARK 465 PHE B 697 REMARK 465 ASN B 698 REMARK 465 ASP B 699 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 744 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 821 -26.86 -142.87 REMARK 500 SER B 711 89.98 -153.93 REMARK 500 LYS B 803 28.60 48.36 REMARK 500 REMARK 500 REMARK: NULL DBREF 1IU1 A 677 822 UNP O43747 AP1G1_HUMAN 676 821 DBREF 1IU1 B 677 822 UNP O43747 AP1G1_HUMAN 676 821 SEQRES 1 A 146 SER VAL PRO GLN ILE SER GLN PRO HIS PHE LEU LEU ASP SEQRES 2 A 146 GLY LEU SER SER GLN PRO LEU PHE ASN ASP ILE ALA ALA SEQRES 3 A 146 GLY ILE PRO SER ILE THR ALA TYR SER LYS ASN GLY LEU SEQRES 4 A 146 LYS ILE GLU PHE THR PHE GLU ARG SER ASN THR ASN PRO SEQRES 5 A 146 SER VAL THR VAL ILE THR ILE GLN ALA SER ASN SER THR SEQRES 6 A 146 GLU LEU ASP MET THR ASP PHE VAL PHE GLN ALA ALA VAL SEQRES 7 A 146 PRO LYS THR PHE GLN LEU GLN LEU LEU SER PRO SER SER SEQRES 8 A 146 SER ILE VAL PRO ALA PHE ASN THR GLY THR ILE THR GLN SEQRES 9 A 146 VAL ILE LYS VAL LEU ASN PRO GLN LYS GLN GLN LEU ARG SEQRES 10 A 146 MET ARG ILE LYS LEU THR TYR ASN HIS LYS GLY SER ALA SEQRES 11 A 146 MET GLN ASP LEU ALA GLU VAL ASN ASN PHE PRO PRO GLN SEQRES 12 A 146 SER TRP GLN SEQRES 1 B 146 SER VAL PRO GLN ILE SER GLN PRO HIS PHE LEU LEU ASP SEQRES 2 B 146 GLY LEU SER SER GLN PRO LEU PHE ASN ASP ILE ALA ALA SEQRES 3 B 146 GLY ILE PRO SER ILE THR ALA TYR SER LYS ASN GLY LEU SEQRES 4 B 146 LYS ILE GLU PHE THR PHE GLU ARG SER ASN THR ASN PRO SEQRES 5 B 146 SER VAL THR VAL ILE THR ILE GLN ALA SER ASN SER THR SEQRES 6 B 146 GLU LEU ASP MET THR ASP PHE VAL PHE GLN ALA ALA VAL SEQRES 7 B 146 PRO LYS THR PHE GLN LEU GLN LEU LEU SER PRO SER SER SEQRES 8 B 146 SER ILE VAL PRO ALA PHE ASN THR GLY THR ILE THR GLN SEQRES 9 B 146 VAL ILE LYS VAL LEU ASN PRO GLN LYS GLN GLN LEU ARG SEQRES 10 B 146 MET ARG ILE LYS LEU THR TYR ASN HIS LYS GLY SER ALA SEQRES 11 B 146 MET GLN ASP LEU ALA GLU VAL ASN ASN PHE PRO PRO GLN SEQRES 12 B 146 SER TRP GLN FORMUL 3 HOH *132(H2 O) HELIX 1 1 PRO A 771 THR A 775 5 5 HELIX 2 2 PRO A 817 TRP A 821 5 5 HELIX 3 3 PRO B 771 THR B 775 5 5 HELIX 4 4 PRO B 817 TRP B 821 5 5 SHEET 1 A 5 ILE A 707 LYS A 712 0 SHEET 2 A 5 LEU A 715 ARG A 723 -1 O ILE A 717 N TYR A 710 SHEET 3 A 5 VAL A 730 ASN A 739 -1 O VAL A 732 N GLU A 722 SHEET 4 A 5 ILE A 778 LEU A 785 -1 O ILE A 782 N ILE A 733 SHEET 5 A 5 GLN A 759 LEU A 762 -1 N GLN A 761 O LYS A 783 SHEET 1 B 3 THR A 746 ALA A 753 0 SHEET 2 B 3 ARG A 795 HIS A 802 -1 O ASN A 801 N THR A 746 SHEET 3 B 3 SER A 805 GLU A 812 -1 O ALA A 811 N ILE A 796 SHEET 1 C 5 ILE B 707 LYS B 712 0 SHEET 2 C 5 LEU B 715 ARG B 723 -1 O ILE B 717 N TYR B 710 SHEET 3 C 5 VAL B 730 ASN B 739 -1 O VAL B 732 N GLU B 722 SHEET 4 C 5 ILE B 778 LEU B 785 -1 O ILE B 782 N ILE B 733 SHEET 5 C 5 GLN B 759 LEU B 762 -1 N GLN B 761 O LYS B 783 SHEET 1 D 3 THR B 746 ALA B 753 0 SHEET 2 D 3 ARG B 795 HIS B 802 -1 O THR B 799 N VAL B 749 SHEET 3 D 3 SER B 805 GLU B 812 -1 O MET B 807 N TYR B 800 CRYST1 62.132 62.132 147.869 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016095 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016095 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006763 0.00000