PDB Short entry for 1IVU HEADER OXIDOREDUCTASE 29-MAR-02 1IVU TITLE CRYSTAL STRUCTURE OF COPPER AMINE OXIDASE FROM ARTHROBACTER TITLE 2 GLOBIFORMIS: INITIAL INTERMEDIATE IN TOPAQUINONE BIOGENESIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINE OXIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PHENYLETHYLAMINE OXIDASE; COMPND 5 EC: 1.4.3.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARTHROBACTER GLOBIFORMIS; SOURCE 3 ORGANISM_TAXID: 1665; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: CD03; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PEPO2 KEYWDS OXIDOREDUCTASE, COPPER, AMINE OXIDASE, BIOGENESIS, TPQ, FREEZE-TRAPP, KEYWDS 2 INTERMEDIATE, QUINONE COFACTOR EXPDTA X-RAY DIFFRACTION AUTHOR M.KIM,T.OKAJIMA,S.KISHISHITA,M.YOSHIMURA,A.KAWAMORI,K.TANIZAWA, AUTHOR 2 H.YAMAGUCHI REVDAT 6 27-DEC-23 1IVU 1 REMARK LINK REVDAT 5 23-OCT-19 1IVU 1 JRNL REVDAT 4 04-OCT-17 1IVU 1 REMARK REVDAT 3 24-FEB-09 1IVU 1 VERSN REVDAT 2 07-JAN-03 1IVU 1 REMARK REVDAT 1 07-AUG-02 1IVU 0 JRNL AUTH M.KIM,T.OKAJIMA,S.KISHISHITA,M.YOSHIMURA,A.KAWAMORI, JRNL AUTH 2 K.TANIZAWA,H.YAMAGUCHI JRNL TITL X-RAY SNAPSHOTS OF QUINONE COFACTOR BIOGENESIS IN BACTERIAL JRNL TITL 2 COPPER AMINE OXIDASE. JRNL REF NAT.STRUCT.BIOL. V. 9 591 2002 JRNL REFN ISSN 1072-8368 JRNL PMID 12134140 JRNL DOI 10.1038/NSB824 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 7.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 92684 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 7612 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9732 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 1210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.850 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1IVU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-APR-02. REMARK 100 THE DEPOSITION ID IS D_1000005319. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-APR-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.7 REMARK 200 MONOCHROMATOR : DCM REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : OXFORD PX210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 151539 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.790 REMARK 200 RESOLUTION RANGE LOW (A) : 69.960 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: POTASSIUM SODIUM TARTRATE, PH 6.8, REMARK 280 MICRODIALYSIS, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 44.70642 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.58800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 85.54425 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 44.70642 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.58800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 85.54425 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMETRIC UNIT IS COMPOSED OF A HOMO DIMER, REMARK 300 CORRESONDING TO ONE BIOLOGICAL UNIT:X, Y, Z. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 PRO A 3 REMARK 465 SER A 4 REMARK 465 THR A 5 REMARK 465 ILE A 6 REMARK 465 GLN A 7 REMARK 465 THR A 8 REMARK 465 PRO A 629 REMARK 465 SER A 630 REMARK 465 GLN A 631 REMARK 465 SER A 632 REMARK 465 GLY A 633 REMARK 465 SER A 634 REMARK 465 HIS A 635 REMARK 465 CYS A 636 REMARK 465 HIS A 637 REMARK 465 GLY A 638 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 PRO B 3 REMARK 465 SER B 4 REMARK 465 THR B 5 REMARK 465 ILE B 6 REMARK 465 GLN B 7 REMARK 465 THR B 8 REMARK 465 PRO B 629 REMARK 465 SER B 630 REMARK 465 GLN B 631 REMARK 465 SER B 632 REMARK 465 GLY B 633 REMARK 465 SER B 634 REMARK 465 HIS B 635 REMARK 465 CYS B 636 REMARK 465 HIS B 637 REMARK 465 GLY B 638 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 599 NE1 TRP A 599 CE2 0.112 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 41 135.32 -170.25 REMARK 500 ALA A 51 -52.22 -142.95 REMARK 500 ALA A 87 94.89 -164.00 REMARK 500 PHE A 142 -114.76 -117.43 REMARK 500 GLU A 241 55.58 38.12 REMARK 500 LYS A 242 -10.68 82.57 REMARK 500 ILE A 271 -57.70 -127.55 REMARK 500 LEU A 303 97.51 65.92 REMARK 500 THR A 403 -158.93 -144.94 REMARK 500 ASN A 464 52.34 -156.69 REMARK 500 SER A 471 -161.40 -129.42 REMARK 500 ASP A 488 81.18 -157.47 REMARK 500 ALA B 55 -179.49 64.86 REMARK 500 ALA B 94 -61.46 -94.44 REMARK 500 PHE B 142 -141.28 -127.78 REMARK 500 TYR B 204 1.65 -65.23 REMARK 500 ASN B 236 14.51 -140.74 REMARK 500 GLU B 241 59.36 39.36 REMARK 500 LYS B 242 -19.04 83.21 REMARK 500 ILE B 271 -56.03 -124.94 REMARK 500 LEU B 303 94.31 71.11 REMARK 500 ALA B 442 53.71 -141.88 REMARK 500 ASN B 464 52.89 -158.55 REMARK 500 SER B 471 -159.10 -133.21 REMARK 500 ASP B 488 86.23 -154.53 REMARK 500 PRO B 500 -9.37 -59.60 REMARK 500 ALA B 565 -169.56 -108.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A1001 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 382 OH REMARK 620 2 HIS A 431 NE2 85.6 REMARK 620 3 HIS A 433 NE2 109.8 92.5 REMARK 620 4 HIS A 592 ND1 101.6 87.0 148.5 REMARK 620 5 HIS A 592 ND1 149.7 114.0 92.9 59.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B1002 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 431 NE2 REMARK 620 2 HIS B 433 NE2 107.4 REMARK 620 3 HIS B 592 ND1 92.5 154.3 REMARK 620 4 HIS B 592 ND1 134.4 92.3 62.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 1002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1AV4 RELATED DB: PDB REMARK 900 1AV4 CONTAINS THE COPPER-CONTAINING HOLO ENZYME AT 2.2 ANGSTROMS. REMARK 900 RELATED ID: 1AVK RELATED DB: PDB REMARK 900 1AVK CONTAINS APO ENZYME. REMARK 900 RELATED ID: 1AVL RELATED DB: PDB REMARK 900 1AVL CONTAINS THE COPPER-CONTAINING HOLO ENZYME AT 2.8 ANGSTROMS. REMARK 900 RELATED ID: 1IQX RELATED DB: PDB REMARK 900 1IQX CONTAINS THE COBALT-SUBSTITUTED HOLO ENZYME. REMARK 900 RELATED ID: 1IQY RELATED DB: PDB REMARK 900 1IQY CONTAINS THE NICKEL-SUBSTITUTED HOLO ENZYME. REMARK 900 RELATED ID: 1IU7 RELATED DB: PDB REMARK 900 1IU7 CONTAINS THE HOLO ENZYME. REMARK 900 RELATED ID: 1IVV RELATED DB: PDB REMARK 900 1IVV CONTAINS THE SAME PROTEIN, EARLY INTERMEDIATE IN TOPAQUINONE REMARK 900 BIOGENESIS. REMARK 900 RELATED ID: 1IVW RELATED DB: PDB REMARK 900 1IVW CONTAINS THE SAME PROTEIN, LATE INTERMEDIATE IN TOPAQUINONE REMARK 900 BIOGENESIS. REMARK 900 RELATED ID: 1IVX RELATED DB: PDB REMARK 900 1IVX CONTAINS THE SAME PROTEIN, HOLO FORM GENERATED BY BIOGENESIS REMARK 900 IN CRYSTAL. DBREF 1IVU A 1 638 UNP P46881 PAOX_ARTGO 1 638 DBREF 1IVU B 1 638 UNP P46881 PAOX_ARTGO 1 638 SEQRES 1 A 638 MET THR PRO SER THR ILE GLN THR ALA SER PRO PHE ARG SEQRES 2 A 638 LEU ALA SER ALA GLY GLU ILE SER GLU VAL GLN GLY ILE SEQRES 3 A 638 LEU ARG THR ALA GLY LEU LEU GLY PRO GLU LYS ARG ILE SEQRES 4 A 638 ALA TYR LEU GLY VAL LEU ASP PRO ALA ARG GLY ALA GLY SEQRES 5 A 638 SER GLU ALA GLU ASP ARG ARG PHE ARG VAL PHE ILE HIS SEQRES 6 A 638 ASP VAL SER GLY ALA ARG PRO GLN GLU VAL THR VAL SER SEQRES 7 A 638 VAL THR ASN GLY THR VAL ILE SER ALA VAL GLU LEU ASP SEQRES 8 A 638 THR ALA ALA THR GLY GLU LEU PRO VAL LEU GLU GLU GLU SEQRES 9 A 638 PHE GLU VAL VAL GLU GLN LEU LEU ALA THR ASP GLU ARG SEQRES 10 A 638 TRP LEU LYS ALA LEU ALA ALA ARG ASN LEU ASP VAL SER SEQRES 11 A 638 LYS VAL ARG VAL ALA PRO LEU SER ALA GLY VAL PHE GLU SEQRES 12 A 638 TYR ALA GLU GLU ARG GLY ARG ARG ILE LEU ARG GLY LEU SEQRES 13 A 638 ALA PHE VAL GLN ASP PHE PRO GLU ASP SER ALA TRP ALA SEQRES 14 A 638 HIS PRO VAL ASP GLY LEU VAL ALA TYR VAL ASP VAL VAL SEQRES 15 A 638 SER LYS GLU VAL THR ARG VAL ILE ASP THR GLY VAL PHE SEQRES 16 A 638 PRO VAL PRO ALA GLU HIS GLY ASN TYR THR ASP PRO GLU SEQRES 17 A 638 LEU THR GLY PRO LEU ARG THR THR GLN LYS PRO ILE SER SEQRES 18 A 638 ILE THR GLN PRO GLU GLY PRO SER PHE THR VAL THR GLY SEQRES 19 A 638 GLY ASN HIS ILE GLU TRP GLU LYS TRP SER LEU ASP VAL SEQRES 20 A 638 GLY PHE ASP VAL ARG GLU GLY VAL VAL LEU HIS ASN ILE SEQRES 21 A 638 ALA PHE ARG ASP GLY ASP ARG LEU ARG PRO ILE ILE ASN SEQRES 22 A 638 ARG ALA SER ILE ALA GLU MET VAL VAL PRO TYR GLY ASP SEQRES 23 A 638 PRO SER PRO ILE ARG SER TRP GLN ASN TYR PHE ASP THR SEQRES 24 A 638 GLY GLU TYR LEU VAL GLY GLN TYR ALA ASN SER LEU GLU SEQRES 25 A 638 LEU GLY CYS ASP CYS LEU GLY ASP ILE THR TYR LEU SER SEQRES 26 A 638 PRO VAL ILE SER ASP ALA PHE GLY ASN PRO ARG GLU ILE SEQRES 27 A 638 ARG ASN GLY ILE CYS MET HIS GLU GLU ASP TRP GLY ILE SEQRES 28 A 638 LEU ALA LYS HIS SER ASP LEU TRP SER GLY ILE ASN TYR SEQRES 29 A 638 THR ARG ARG ASN ARG ARG MET VAL ILE SER PHE PHE THR SEQRES 30 A 638 THR ILE GLY ASN TYR ASP TYR GLY PHE TYR TRP TYR LEU SEQRES 31 A 638 TYR LEU ASP GLY THR ILE GLU PHE GLU ALA LYS ALA THR SEQRES 32 A 638 GLY VAL VAL PHE THR SER ALA PHE PRO GLU GLY GLY SER SEQRES 33 A 638 ASP ASN ILE SER GLN LEU ALA PRO GLY LEU GLY ALA PRO SEQRES 34 A 638 PHE HIS GLN HIS ILE PHE SER ALA ARG LEU ASP MET ALA SEQRES 35 A 638 ILE ASP GLY PHE THR ASN ARG VAL GLU GLU GLU ASP VAL SEQRES 36 A 638 VAL ARG GLN THR MET GLY PRO GLY ASN GLU ARG GLY ASN SEQRES 37 A 638 ALA PHE SER ARG LYS ARG THR VAL LEU THR ARG GLU SER SEQRES 38 A 638 GLU ALA VAL ARG GLU ALA ASP ALA ARG THR GLY ARG THR SEQRES 39 A 638 TRP ILE ILE SER ASN PRO GLU SER LYS ASN ARG LEU ASN SEQRES 40 A 638 GLU PRO VAL GLY TYR LYS LEU HIS ALA HIS ASN GLN PRO SEQRES 41 A 638 THR LEU LEU ALA ASP PRO GLY SER SER ILE ALA ARG ARG SEQRES 42 A 638 ALA ALA PHE ALA THR LYS ASP LEU TRP VAL THR ARG TYR SEQRES 43 A 638 ALA ASP ASP GLU ARG TYR PRO THR GLY ASP PHE VAL ASN SEQRES 44 A 638 GLN HIS SER GLY GLY ALA GLY LEU PRO SER TYR ILE ALA SEQRES 45 A 638 GLN ASP ARG ASP ILE ASP GLY GLN ASP ILE VAL VAL TRP SEQRES 46 A 638 HIS THR PHE GLY LEU THR HIS PHE PRO ARG VAL GLU ASP SEQRES 47 A 638 TRP PRO ILE MET PRO VAL ASP THR VAL GLY PHE LYS LEU SEQRES 48 A 638 ARG PRO GLU GLY PHE PHE ASP ARG SER PRO VAL LEU ASP SEQRES 49 A 638 VAL PRO ALA ASN PRO SER GLN SER GLY SER HIS CYS HIS SEQRES 50 A 638 GLY SEQRES 1 B 638 MET THR PRO SER THR ILE GLN THR ALA SER PRO PHE ARG SEQRES 2 B 638 LEU ALA SER ALA GLY GLU ILE SER GLU VAL GLN GLY ILE SEQRES 3 B 638 LEU ARG THR ALA GLY LEU LEU GLY PRO GLU LYS ARG ILE SEQRES 4 B 638 ALA TYR LEU GLY VAL LEU ASP PRO ALA ARG GLY ALA GLY SEQRES 5 B 638 SER GLU ALA GLU ASP ARG ARG PHE ARG VAL PHE ILE HIS SEQRES 6 B 638 ASP VAL SER GLY ALA ARG PRO GLN GLU VAL THR VAL SER SEQRES 7 B 638 VAL THR ASN GLY THR VAL ILE SER ALA VAL GLU LEU ASP SEQRES 8 B 638 THR ALA ALA THR GLY GLU LEU PRO VAL LEU GLU GLU GLU SEQRES 9 B 638 PHE GLU VAL VAL GLU GLN LEU LEU ALA THR ASP GLU ARG SEQRES 10 B 638 TRP LEU LYS ALA LEU ALA ALA ARG ASN LEU ASP VAL SER SEQRES 11 B 638 LYS VAL ARG VAL ALA PRO LEU SER ALA GLY VAL PHE GLU SEQRES 12 B 638 TYR ALA GLU GLU ARG GLY ARG ARG ILE LEU ARG GLY LEU SEQRES 13 B 638 ALA PHE VAL GLN ASP PHE PRO GLU ASP SER ALA TRP ALA SEQRES 14 B 638 HIS PRO VAL ASP GLY LEU VAL ALA TYR VAL ASP VAL VAL SEQRES 15 B 638 SER LYS GLU VAL THR ARG VAL ILE ASP THR GLY VAL PHE SEQRES 16 B 638 PRO VAL PRO ALA GLU HIS GLY ASN TYR THR ASP PRO GLU SEQRES 17 B 638 LEU THR GLY PRO LEU ARG THR THR GLN LYS PRO ILE SER SEQRES 18 B 638 ILE THR GLN PRO GLU GLY PRO SER PHE THR VAL THR GLY SEQRES 19 B 638 GLY ASN HIS ILE GLU TRP GLU LYS TRP SER LEU ASP VAL SEQRES 20 B 638 GLY PHE ASP VAL ARG GLU GLY VAL VAL LEU HIS ASN ILE SEQRES 21 B 638 ALA PHE ARG ASP GLY ASP ARG LEU ARG PRO ILE ILE ASN SEQRES 22 B 638 ARG ALA SER ILE ALA GLU MET VAL VAL PRO TYR GLY ASP SEQRES 23 B 638 PRO SER PRO ILE ARG SER TRP GLN ASN TYR PHE ASP THR SEQRES 24 B 638 GLY GLU TYR LEU VAL GLY GLN TYR ALA ASN SER LEU GLU SEQRES 25 B 638 LEU GLY CYS ASP CYS LEU GLY ASP ILE THR TYR LEU SER SEQRES 26 B 638 PRO VAL ILE SER ASP ALA PHE GLY ASN PRO ARG GLU ILE SEQRES 27 B 638 ARG ASN GLY ILE CYS MET HIS GLU GLU ASP TRP GLY ILE SEQRES 28 B 638 LEU ALA LYS HIS SER ASP LEU TRP SER GLY ILE ASN TYR SEQRES 29 B 638 THR ARG ARG ASN ARG ARG MET VAL ILE SER PHE PHE THR SEQRES 30 B 638 THR ILE GLY ASN TYR ASP TYR GLY PHE TYR TRP TYR LEU SEQRES 31 B 638 TYR LEU ASP GLY THR ILE GLU PHE GLU ALA LYS ALA THR SEQRES 32 B 638 GLY VAL VAL PHE THR SER ALA PHE PRO GLU GLY GLY SER SEQRES 33 B 638 ASP ASN ILE SER GLN LEU ALA PRO GLY LEU GLY ALA PRO SEQRES 34 B 638 PHE HIS GLN HIS ILE PHE SER ALA ARG LEU ASP MET ALA SEQRES 35 B 638 ILE ASP GLY PHE THR ASN ARG VAL GLU GLU GLU ASP VAL SEQRES 36 B 638 VAL ARG GLN THR MET GLY PRO GLY ASN GLU ARG GLY ASN SEQRES 37 B 638 ALA PHE SER ARG LYS ARG THR VAL LEU THR ARG GLU SER SEQRES 38 B 638 GLU ALA VAL ARG GLU ALA ASP ALA ARG THR GLY ARG THR SEQRES 39 B 638 TRP ILE ILE SER ASN PRO GLU SER LYS ASN ARG LEU ASN SEQRES 40 B 638 GLU PRO VAL GLY TYR LYS LEU HIS ALA HIS ASN GLN PRO SEQRES 41 B 638 THR LEU LEU ALA ASP PRO GLY SER SER ILE ALA ARG ARG SEQRES 42 B 638 ALA ALA PHE ALA THR LYS ASP LEU TRP VAL THR ARG TYR SEQRES 43 B 638 ALA ASP ASP GLU ARG TYR PRO THR GLY ASP PHE VAL ASN SEQRES 44 B 638 GLN HIS SER GLY GLY ALA GLY LEU PRO SER TYR ILE ALA SEQRES 45 B 638 GLN ASP ARG ASP ILE ASP GLY GLN ASP ILE VAL VAL TRP SEQRES 46 B 638 HIS THR PHE GLY LEU THR HIS PHE PRO ARG VAL GLU ASP SEQRES 47 B 638 TRP PRO ILE MET PRO VAL ASP THR VAL GLY PHE LYS LEU SEQRES 48 B 638 ARG PRO GLU GLY PHE PHE ASP ARG SER PRO VAL LEU ASP SEQRES 49 B 638 VAL PRO ALA ASN PRO SER GLN SER GLY SER HIS CYS HIS SEQRES 50 B 638 GLY HET CU A1001 1 HET CU B1002 1 HETNAM CU COPPER (II) ION FORMUL 3 CU 2(CU 2+) FORMUL 5 HOH *1210(H2 O) HELIX 1 1 SER A 16 ALA A 30 1 15 HELIX 2 2 ASP A 91 GLY A 96 1 6 HELIX 3 3 LEU A 101 THR A 114 1 14 HELIX 4 4 ASP A 115 ARG A 125 1 11 HELIX 5 5 ASP A 128 SER A 130 5 3 HELIX 6 6 TYR A 144 ARG A 148 5 5 HELIX 7 7 SER A 166 HIS A 170 5 5 HELIX 8 8 ASP A 206 GLY A 211 1 6 HELIX 9 9 ARG A 479 GLU A 482 5 4 HELIX 10 10 ASP A 488 GLY A 492 5 5 HELIX 11 11 SER A 528 ALA A 534 1 7 HELIX 12 12 ALA A 535 LYS A 539 5 5 HELIX 13 13 ALA A 565 ALA A 572 1 8 HELIX 14 14 ARG A 595 TRP A 599 5 5 HELIX 15 15 SER B 16 ALA B 30 1 15 HELIX 16 16 ASP B 91 GLY B 96 1 6 HELIX 17 17 LEU B 101 ALA B 113 1 13 HELIX 18 18 ASP B 115 ARG B 125 1 11 HELIX 19 19 ASP B 128 SER B 130 5 3 HELIX 20 20 TYR B 144 ARG B 148 5 5 HELIX 21 21 SER B 166 HIS B 170 5 5 HELIX 22 22 ASP B 206 GLY B 211 1 6 HELIX 23 23 LEU B 303 ALA B 308 5 6 HELIX 24 24 ARG B 479 GLU B 482 5 4 HELIX 25 25 ASP B 488 GLY B 492 5 5 HELIX 26 26 SER B 528 ALA B 534 1 7 HELIX 27 27 ALA B 535 LYS B 539 5 5 HELIX 28 28 GLY B 566 ALA B 572 1 7 HELIX 29 29 ARG B 595 TRP B 599 5 5 SHEET 1 A 4 LYS A 37 VAL A 44 0 SHEET 2 A 4 ARG A 59 ASP A 66 -1 O HIS A 65 N ARG A 38 SHEET 3 A 4 GLN A 73 SER A 78 -1 O GLN A 73 N ILE A 64 SHEET 4 A 4 THR A 83 GLU A 89 -1 O THR A 83 N SER A 78 SHEET 1 B 4 VAL A 132 SER A 138 0 SHEET 2 B 4 ILE A 152 VAL A 159 -1 O ARG A 154 N LEU A 137 SHEET 3 B 4 LEU A 175 ASP A 180 -1 O VAL A 179 N LEU A 153 SHEET 4 B 4 GLU A 185 ASP A 191 -1 O ILE A 190 N VAL A 176 SHEET 1 C 2 SER A 221 THR A 223 0 SHEET 2 C 2 SER B 221 THR B 223 -1 O THR B 223 N SER A 221 SHEET 1 D 9 VAL A 484 ARG A 485 0 SHEET 2 D 9 LEU A 541 ARG A 545 -1 O LEU A 541 N ARG A 485 SHEET 3 D 9 ILE A 582 HIS A 592 -1 O TRP A 585 N TRP A 542 SHEET 4 D 9 HIS A 431 MET A 441 -1 N LEU A 439 O VAL A 584 SHEET 5 D 9 ARG A 267 PRO A 283 -1 N SER A 276 O ARG A 438 SHEET 6 D 9 GLY A 254 ASP A 264 -1 N LEU A 257 O ALA A 275 SHEET 7 D 9 TRP A 243 ASP A 250 -1 N ASP A 246 O HIS A 258 SHEET 8 D 9 HIS A 237 TRP A 240 -1 N ILE A 238 O LEU A 245 SHEET 9 D 9 THR A 231 THR A 233 -1 N THR A 233 O HIS A 237 SHEET 1 E 6 VAL A 484 ARG A 485 0 SHEET 2 E 6 LEU A 541 ARG A 545 -1 O LEU A 541 N ARG A 485 SHEET 3 E 6 ILE A 582 HIS A 592 -1 O TRP A 585 N TRP A 542 SHEET 4 E 6 HIS A 431 MET A 441 -1 N LEU A 439 O VAL A 584 SHEET 5 E 6 ARG A 267 PRO A 283 -1 N SER A 276 O ARG A 438 SHEET 6 E 6 ASN A 295 PHE A 297 -1 O TYR A 296 N VAL A 282 SHEET 1 F10 THR A 322 LEU A 324 0 SHEET 2 F10 ILE A 342 SER A 356 -1 O MET A 344 N THR A 322 SHEET 3 F10 ASN A 363 ILE A 379 -1 O VAL A 372 N HIS A 345 SHEET 4 F10 TYR A 382 TYR A 391 -1 O PHE A 386 N PHE A 375 SHEET 5 F10 ILE A 396 GLY A 404 -1 O GLU A 397 N TYR A 389 SHEET 6 F10 MET A 602 PRO A 613 -1 O LEU A 611 N ILE A 396 SHEET 7 F10 PRO A 509 ALA A 516 -1 N LYS A 513 O ARG A 612 SHEET 8 F10 THR A 494 LYS A 503 -1 N TRP A 495 O LEU A 514 SHEET 9 F10 ARG A 449 ARG A 457 -1 N GLU A 451 O ILE A 496 SHEET 10 F10 PHE A 470 LEU A 477 -1 O SER A 471 N VAL A 456 SHEET 1 G 2 VAL A 327 SER A 329 0 SHEET 2 G 2 PRO A 335 GLU A 337 -1 O ARG A 336 N ILE A 328 SHEET 1 H 3 SER A 409 ALA A 410 0 SHEET 2 H 3 LEU A 426 PRO A 429 -1 O GLY A 427 N SER A 409 SHEET 3 H 3 ILE A 419 ALA A 423 -1 N SER A 420 O ALA A 428 SHEET 1 I 4 LYS B 37 VAL B 44 0 SHEET 2 I 4 ARG B 59 ASP B 66 -1 O HIS B 65 N ARG B 38 SHEET 3 I 4 GLN B 73 SER B 78 -1 O GLN B 73 N ILE B 64 SHEET 4 I 4 THR B 83 GLU B 89 -1 O VAL B 88 N GLU B 74 SHEET 1 J 4 VAL B 132 SER B 138 0 SHEET 2 J 4 ILE B 152 VAL B 159 -1 O LEU B 156 N ALA B 135 SHEET 3 J 4 LEU B 175 ASP B 180 -1 O VAL B 179 N LEU B 153 SHEET 4 J 4 GLU B 185 ASP B 191 -1 O ILE B 190 N VAL B 176 SHEET 1 K 9 VAL B 484 ARG B 485 0 SHEET 2 K 9 LEU B 541 ARG B 545 -1 O LEU B 541 N ARG B 485 SHEET 3 K 9 ILE B 582 HIS B 592 -1 O TRP B 585 N TRP B 542 SHEET 4 K 9 HIS B 431 MET B 441 -1 N LEU B 439 O VAL B 584 SHEET 5 K 9 ARG B 267 PRO B 283 -1 N ARG B 274 O ASP B 440 SHEET 6 K 9 GLY B 254 ASP B 264 -1 N ILE B 260 O ILE B 271 SHEET 7 K 9 TRP B 243 ASP B 250 -1 N GLY B 248 O VAL B 256 SHEET 8 K 9 HIS B 237 TRP B 240 -1 N ILE B 238 O LEU B 245 SHEET 9 K 9 THR B 231 THR B 233 -1 N THR B 233 O HIS B 237 SHEET 1 L 6 VAL B 484 ARG B 485 0 SHEET 2 L 6 LEU B 541 ARG B 545 -1 O LEU B 541 N ARG B 485 SHEET 3 L 6 ILE B 582 HIS B 592 -1 O TRP B 585 N TRP B 542 SHEET 4 L 6 HIS B 431 MET B 441 -1 N LEU B 439 O VAL B 584 SHEET 5 L 6 ARG B 267 PRO B 283 -1 N ARG B 274 O ASP B 440 SHEET 6 L 6 ASN B 295 PHE B 297 -1 O TYR B 296 N VAL B 282 SHEET 1 M10 THR B 322 LEU B 324 0 SHEET 2 M10 ILE B 342 SER B 356 -1 O MET B 344 N THR B 322 SHEET 3 M10 ASN B 363 ILE B 379 -1 O TYR B 364 N HIS B 355 SHEET 4 M10 TYR B 382 TYR B 391 -1 O PHE B 386 N PHE B 375 SHEET 5 M10 ILE B 396 GLY B 404 -1 O GLU B 397 N TYR B 389 SHEET 6 M10 MET B 602 PRO B 613 -1 O VAL B 607 N ALA B 400 SHEET 7 M10 PRO B 509 ALA B 516 -1 N HIS B 515 O LYS B 610 SHEET 8 M10 THR B 494 LYS B 503 -1 N TRP B 495 O LEU B 514 SHEET 9 M10 ARG B 449 ARG B 457 -1 N GLU B 451 O ILE B 496 SHEET 10 M10 PHE B 470 LEU B 477 -1 O SER B 471 N VAL B 456 SHEET 1 N 2 VAL B 327 SER B 329 0 SHEET 2 N 2 PRO B 335 GLU B 337 -1 O ARG B 336 N ILE B 328 SHEET 1 O 3 SER B 409 ALA B 410 0 SHEET 2 O 3 LEU B 426 PRO B 429 -1 O GLY B 427 N SER B 409 SHEET 3 O 3 ILE B 419 ALA B 423 -1 N SER B 420 O ALA B 428 SSBOND 1 CYS A 317 CYS A 343 1555 1555 2.03 SSBOND 2 CYS B 317 CYS B 343 1555 1555 2.70 LINK OH TYR A 382 CU CU A1001 1555 1555 2.58 LINK NE2 HIS A 431 CU CU A1001 1555 1555 1.82 LINK NE2 HIS A 433 CU CU A1001 1555 1555 2.14 LINK ND1AHIS A 592 CU CU A1001 1555 1555 2.17 LINK ND1BHIS A 592 CU CU A1001 1555 1555 2.13 LINK NE2 HIS B 431 CU CU B1002 1555 1555 1.96 LINK NE2 HIS B 433 CU CU B1002 1555 1555 2.09 LINK ND1AHIS B 592 CU CU B1002 1555 1555 2.01 LINK ND1BHIS B 592 CU CU B1002 1555 1555 2.50 CISPEP 1 TRP A 599 PRO A 600 0 -4.42 CISPEP 2 TRP B 599 PRO B 600 0 0.84 SITE 1 AC1 4 TYR A 382 HIS A 431 HIS A 433 HIS A 592 SITE 1 AC2 4 TYR B 382 HIS B 431 HIS B 433 HIS B 592 CRYST1 157.878 63.176 184.279 90.00 111.81 90.00 I 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006334 0.000000 0.002535 0.00000 SCALE2 0.000000 0.015829 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005845 0.00000