PDB Short entry for 1J4G HEADER HYDROLASE 30-SEP-01 1J4G TITLE CRYSTAL STRUCTURE ANALYSIS OF THE TRICHOSANTHIN DELTA C7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRICHOSANTHIN DELTA C7; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN; COMPND 5 EC: 3.2.2.22; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRICHOSANTHES KIRILOWII; SOURCE 3 ORGANISM_TAXID: 3677; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET8C KEYWDS ANTIVIRAL, PROTEIN SYNTHESIS INHIBITOR, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.DING,H.M.TOO,Z.L.WANG,Y.W.LIU,Y.C.DONG,P.C.SHAW,Z.H.RAO REVDAT 4 21-DEC-22 1J4G 1 REMARK SEQADV LINK REVDAT 3 24-FEB-09 1J4G 1 VERSN REVDAT 2 28-JAN-03 1J4G 1 REMARK REVDAT 1 24-OCT-01 1J4G 0 JRNL AUTH Y.DING,H.M.TOO,Z.L.WANG,Y.W.LIU,Y.C.DONG,P.C.SHAW,Z.H.RAO JRNL TITL CRYSTAL STRUCTURE ANALYSIS OF THE TRICHOSANTHIN DELTA C7 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 59190 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5956 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7460 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 1019 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.014 REMARK 3 BOND ANGLES (DEGREES) : 1.620 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CNS REMARK 4 REMARK 4 1J4G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-OCT-01. REMARK 100 THE DEPOSITION ID IS D_1000001600. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-00 REMARK 200 TEMPERATURE (KELVIN) : 110.0 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59190 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.13 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.22500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG8000, CALCIUM ACETATE, SODIUM REMARK 280 CACODYLATE, PH 6.5, EVAPORATION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.20000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 241 REMARK 465 ASN A 242 REMARK 465 ARG A 243 REMARK 465 ASN A 244 REMARK 465 ASN A 245 REMARK 465 MET A 246 REMARK 465 ALA A 247 REMARK 465 LEU B 241 REMARK 465 ASN B 242 REMARK 465 ARG B 243 REMARK 465 ASN B 244 REMARK 465 ASN B 245 REMARK 465 MET B 246 REMARK 465 ALA B 247 REMARK 465 LEU C 241 REMARK 465 ASN C 242 REMARK 465 ARG C 243 REMARK 465 ASN C 244 REMARK 465 ASN C 245 REMARK 465 MET C 246 REMARK 465 ALA C 247 REMARK 465 LEU D 241 REMARK 465 ASN D 242 REMARK 465 ARG D 243 REMARK 465 ASN D 244 REMARK 465 ASN D 245 REMARK 465 MET D 246 REMARK 465 ALA D 247 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD1 ILE C 121 O HOH C 1218 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 29 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 MET B 100 CG - SD - CE ANGL. DEV. = 10.4 DEGREES REMARK 500 ARG C 75 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG C 75 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 29 -161.28 -179.93 REMARK 500 ASN A 68 11.81 -149.86 REMARK 500 TYR A 141 61.44 -111.74 REMARK 500 TYR A 142 127.05 -38.19 REMARK 500 THR A 158 -74.06 -120.18 REMARK 500 ASN A 236 -73.60 -152.27 REMARK 500 ARG B 29 -165.75 -165.97 REMARK 500 TYR B 141 55.48 -111.70 REMARK 500 TYR B 142 131.84 -33.99 REMARK 500 THR B 158 -76.63 -122.56 REMARK 500 ASN B 236 -63.26 -150.72 REMARK 500 ARG C 29 -165.12 177.97 REMARK 500 ASN C 68 10.96 -149.09 REMARK 500 PRO C 106 28.26 -67.06 REMARK 500 TYR C 141 59.63 -105.76 REMARK 500 TYR C 142 117.50 -35.12 REMARK 500 THR C 158 -74.71 -129.06 REMARK 500 ASN C 236 -73.97 -151.51 REMARK 500 ARG D 29 -163.36 -177.71 REMARK 500 TYR D 141 56.50 -109.30 REMARK 500 TYR D 142 128.91 -35.63 REMARK 500 THR D 158 -72.87 -125.30 REMARK 500 SER D 235 35.42 -141.13 REMARK 500 ASN D 236 -67.75 -150.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1332 O REMARK 620 2 HOH A1335 O 152.9 REMARK 620 3 HOH A1343 O 100.4 76.5 REMARK 620 4 HOH A1346 O 108.2 98.7 87.7 REMARK 620 5 HOH A1379 O 73.7 93.7 146.1 126.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B1232 O REMARK 620 2 HOH B1252 O 83.0 REMARK 620 3 HOH B1301 O 78.6 87.0 REMARK 620 4 HOH B1307 O 75.0 132.6 127.4 REMARK 620 5 HOH B1316 O 145.8 70.0 119.0 108.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C1204 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C1277 O REMARK 620 2 HOH C1372 O 126.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D1203 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH D1225 O REMARK 620 2 HOH D1339 O 99.4 REMARK 620 3 HOH D1345 O 150.5 104.1 REMARK 620 4 HOH D1362 O 87.4 133.4 89.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 1204 DBREF 1J4G A 1 247 UNP P09989 RIPT_TRIKI 24 270 DBREF 1J4G B 1 247 UNP P09989 RIPT_TRIKI 24 270 DBREF 1J4G C 1 247 UNP P09989 RIPT_TRIKI 24 270 DBREF 1J4G D 1 247 UNP P09989 RIPT_TRIKI 24 270 SEQADV 1J4G MET A 0 UNP P09989 INITIATING METHIONINE SEQADV 1J4G MET B 0 UNP P09989 INITIATING METHIONINE SEQADV 1J4G MET C 0 UNP P09989 INITIATING METHIONINE SEQADV 1J4G MET D 0 UNP P09989 INITIATING METHIONINE SEQRES 1 A 248 MET ASP VAL SER PHE ARG LEU SER GLY ALA THR SER SER SEQRES 2 A 248 SER TYR GLY VAL PHE ILE SER ASN LEU ARG LYS ALA LEU SEQRES 3 A 248 PRO ASN GLU ARG LYS LEU TYR ASP ILE PRO LEU LEU ARG SEQRES 4 A 248 SER SER LEU PRO GLY SER GLN ARG TYR ALA LEU ILE HIS SEQRES 5 A 248 LEU THR ASN TYR ALA ASP GLU THR ILE SER VAL ALA ILE SEQRES 6 A 248 ASP VAL THR ASN VAL TYR ILE MET GLY TYR ARG ALA GLY SEQRES 7 A 248 ASP THR SER TYR PHE PHE ASN GLU ALA SER ALA THR GLU SEQRES 8 A 248 ALA ALA LYS TYR VAL PHE LYS ASP ALA MET ARG LYS VAL SEQRES 9 A 248 THR LEU PRO TYR SER GLY ASN TYR GLU ARG LEU GLN THR SEQRES 10 A 248 ALA ALA GLY LYS ILE ARG GLU ASN ILE PRO LEU GLY LEU SEQRES 11 A 248 PRO ALA LEU ASP SER ALA ILE THR THR LEU PHE TYR TYR SEQRES 12 A 248 ASN ALA ASN SER ALA ALA SER ALA LEU MET VAL LEU ILE SEQRES 13 A 248 GLN SER THR SER GLU ALA ALA ARG TYR LYS PHE ILE GLU SEQRES 14 A 248 GLN GLN ILE GLY LYS ARG VAL ASP LYS THR PHE LEU PRO SEQRES 15 A 248 SER LEU ALA ILE ILE SER LEU GLU ASN SER TRP SER ALA SEQRES 16 A 248 LEU SER LYS GLN ILE GLN ILE ALA SER THR ASN ASN GLY SEQRES 17 A 248 GLN PHE GLU SER PRO VAL VAL LEU ILE ASN ALA GLN ASN SEQRES 18 A 248 GLN ARG VAL THR ILE THR ASN VAL ASP ALA GLY VAL VAL SEQRES 19 A 248 THR SER ASN ILE ALA LEU LEU LEU ASN ARG ASN ASN MET SEQRES 20 A 248 ALA SEQRES 1 B 248 MET ASP VAL SER PHE ARG LEU SER GLY ALA THR SER SER SEQRES 2 B 248 SER TYR GLY VAL PHE ILE SER ASN LEU ARG LYS ALA LEU SEQRES 3 B 248 PRO ASN GLU ARG LYS LEU TYR ASP ILE PRO LEU LEU ARG SEQRES 4 B 248 SER SER LEU PRO GLY SER GLN ARG TYR ALA LEU ILE HIS SEQRES 5 B 248 LEU THR ASN TYR ALA ASP GLU THR ILE SER VAL ALA ILE SEQRES 6 B 248 ASP VAL THR ASN VAL TYR ILE MET GLY TYR ARG ALA GLY SEQRES 7 B 248 ASP THR SER TYR PHE PHE ASN GLU ALA SER ALA THR GLU SEQRES 8 B 248 ALA ALA LYS TYR VAL PHE LYS ASP ALA MET ARG LYS VAL SEQRES 9 B 248 THR LEU PRO TYR SER GLY ASN TYR GLU ARG LEU GLN THR SEQRES 10 B 248 ALA ALA GLY LYS ILE ARG GLU ASN ILE PRO LEU GLY LEU SEQRES 11 B 248 PRO ALA LEU ASP SER ALA ILE THR THR LEU PHE TYR TYR SEQRES 12 B 248 ASN ALA ASN SER ALA ALA SER ALA LEU MET VAL LEU ILE SEQRES 13 B 248 GLN SER THR SER GLU ALA ALA ARG TYR LYS PHE ILE GLU SEQRES 14 B 248 GLN GLN ILE GLY LYS ARG VAL ASP LYS THR PHE LEU PRO SEQRES 15 B 248 SER LEU ALA ILE ILE SER LEU GLU ASN SER TRP SER ALA SEQRES 16 B 248 LEU SER LYS GLN ILE GLN ILE ALA SER THR ASN ASN GLY SEQRES 17 B 248 GLN PHE GLU SER PRO VAL VAL LEU ILE ASN ALA GLN ASN SEQRES 18 B 248 GLN ARG VAL THR ILE THR ASN VAL ASP ALA GLY VAL VAL SEQRES 19 B 248 THR SER ASN ILE ALA LEU LEU LEU ASN ARG ASN ASN MET SEQRES 20 B 248 ALA SEQRES 1 C 248 MET ASP VAL SER PHE ARG LEU SER GLY ALA THR SER SER SEQRES 2 C 248 SER TYR GLY VAL PHE ILE SER ASN LEU ARG LYS ALA LEU SEQRES 3 C 248 PRO ASN GLU ARG LYS LEU TYR ASP ILE PRO LEU LEU ARG SEQRES 4 C 248 SER SER LEU PRO GLY SER GLN ARG TYR ALA LEU ILE HIS SEQRES 5 C 248 LEU THR ASN TYR ALA ASP GLU THR ILE SER VAL ALA ILE SEQRES 6 C 248 ASP VAL THR ASN VAL TYR ILE MET GLY TYR ARG ALA GLY SEQRES 7 C 248 ASP THR SER TYR PHE PHE ASN GLU ALA SER ALA THR GLU SEQRES 8 C 248 ALA ALA LYS TYR VAL PHE LYS ASP ALA MET ARG LYS VAL SEQRES 9 C 248 THR LEU PRO TYR SER GLY ASN TYR GLU ARG LEU GLN THR SEQRES 10 C 248 ALA ALA GLY LYS ILE ARG GLU ASN ILE PRO LEU GLY LEU SEQRES 11 C 248 PRO ALA LEU ASP SER ALA ILE THR THR LEU PHE TYR TYR SEQRES 12 C 248 ASN ALA ASN SER ALA ALA SER ALA LEU MET VAL LEU ILE SEQRES 13 C 248 GLN SER THR SER GLU ALA ALA ARG TYR LYS PHE ILE GLU SEQRES 14 C 248 GLN GLN ILE GLY LYS ARG VAL ASP LYS THR PHE LEU PRO SEQRES 15 C 248 SER LEU ALA ILE ILE SER LEU GLU ASN SER TRP SER ALA SEQRES 16 C 248 LEU SER LYS GLN ILE GLN ILE ALA SER THR ASN ASN GLY SEQRES 17 C 248 GLN PHE GLU SER PRO VAL VAL LEU ILE ASN ALA GLN ASN SEQRES 18 C 248 GLN ARG VAL THR ILE THR ASN VAL ASP ALA GLY VAL VAL SEQRES 19 C 248 THR SER ASN ILE ALA LEU LEU LEU ASN ARG ASN ASN MET SEQRES 20 C 248 ALA SEQRES 1 D 248 MET ASP VAL SER PHE ARG LEU SER GLY ALA THR SER SER SEQRES 2 D 248 SER TYR GLY VAL PHE ILE SER ASN LEU ARG LYS ALA LEU SEQRES 3 D 248 PRO ASN GLU ARG LYS LEU TYR ASP ILE PRO LEU LEU ARG SEQRES 4 D 248 SER SER LEU PRO GLY SER GLN ARG TYR ALA LEU ILE HIS SEQRES 5 D 248 LEU THR ASN TYR ALA ASP GLU THR ILE SER VAL ALA ILE SEQRES 6 D 248 ASP VAL THR ASN VAL TYR ILE MET GLY TYR ARG ALA GLY SEQRES 7 D 248 ASP THR SER TYR PHE PHE ASN GLU ALA SER ALA THR GLU SEQRES 8 D 248 ALA ALA LYS TYR VAL PHE LYS ASP ALA MET ARG LYS VAL SEQRES 9 D 248 THR LEU PRO TYR SER GLY ASN TYR GLU ARG LEU GLN THR SEQRES 10 D 248 ALA ALA GLY LYS ILE ARG GLU ASN ILE PRO LEU GLY LEU SEQRES 11 D 248 PRO ALA LEU ASP SER ALA ILE THR THR LEU PHE TYR TYR SEQRES 12 D 248 ASN ALA ASN SER ALA ALA SER ALA LEU MET VAL LEU ILE SEQRES 13 D 248 GLN SER THR SER GLU ALA ALA ARG TYR LYS PHE ILE GLU SEQRES 14 D 248 GLN GLN ILE GLY LYS ARG VAL ASP LYS THR PHE LEU PRO SEQRES 15 D 248 SER LEU ALA ILE ILE SER LEU GLU ASN SER TRP SER ALA SEQRES 16 D 248 LEU SER LYS GLN ILE GLN ILE ALA SER THR ASN ASN GLY SEQRES 17 D 248 GLN PHE GLU SER PRO VAL VAL LEU ILE ASN ALA GLN ASN SEQRES 18 D 248 GLN ARG VAL THR ILE THR ASN VAL ASP ALA GLY VAL VAL SEQRES 19 D 248 THR SER ASN ILE ALA LEU LEU LEU ASN ARG ASN ASN MET SEQRES 20 D 248 ALA HET CA A1202 1 HET CA B1201 1 HET CA C1204 1 HET CA D1203 1 HETNAM CA CALCIUM ION FORMUL 5 CA 4(CA 2+) FORMUL 9 HOH *1019(H2 O) HELIX 1 1 THR A 10 ALA A 24 1 15 HELIX 2 2 PRO A 42 ARG A 46 1 5 HELIX 3 3 GLU A 85 VAL A 95 1 11 HELIX 4 4 ASN A 110 GLY A 119 1 10 HELIX 5 5 ILE A 121 ILE A 125 5 5 HELIX 6 6 GLY A 128 TYR A 141 1 14 HELIX 7 7 SER A 146 THR A 158 1 13 HELIX 8 8 THR A 158 TYR A 164 1 7 HELIX 9 9 TYR A 164 LYS A 173 1 10 HELIX 10 10 SER A 182 THR A 204 1 23 HELIX 11 11 ALA A 230 SER A 235 1 6 HELIX 12 12 THR B 10 LEU B 25 1 16 HELIX 13 13 PRO B 42 ARG B 46 1 5 HELIX 14 14 GLU B 85 ALA B 92 1 8 HELIX 15 15 ASN B 110 GLY B 119 1 10 HELIX 16 16 ILE B 121 ILE B 125 5 5 HELIX 17 17 GLY B 128 TYR B 141 1 14 HELIX 18 18 SER B 146 THR B 158 1 13 HELIX 19 19 THR B 158 TYR B 164 1 7 HELIX 20 20 TYR B 164 ARG B 174 1 11 HELIX 21 21 SER B 182 SER B 203 1 22 HELIX 22 22 ALA B 230 ASN B 236 1 7 HELIX 23 23 THR C 10 ALA C 24 1 15 HELIX 24 24 PRO C 42 ARG C 46 1 5 HELIX 25 25 GLU C 85 VAL C 95 1 11 HELIX 26 26 ASN C 110 GLY C 119 1 10 HELIX 27 27 ILE C 121 ILE C 125 5 5 HELIX 28 28 GLY C 128 TYR C 141 1 14 HELIX 29 29 SER C 146 THR C 158 1 13 HELIX 30 30 THR C 158 TYR C 164 1 7 HELIX 31 31 TYR C 164 ARG C 174 1 11 HELIX 32 32 SER C 182 THR C 204 1 23 HELIX 33 33 ALA C 230 SER C 235 1 6 HELIX 34 34 THR D 10 LEU D 25 1 16 HELIX 35 35 PRO D 42 ARG D 46 1 5 HELIX 36 36 GLU D 85 ALA D 92 1 8 HELIX 37 37 ASN D 110 GLY D 119 1 10 HELIX 38 38 ILE D 121 ILE D 125 5 5 HELIX 39 39 GLY D 128 TYR D 141 1 14 HELIX 40 40 SER D 146 THR D 158 1 13 HELIX 41 41 THR D 158 TYR D 164 1 7 HELIX 42 42 TYR D 164 LYS D 173 1 10 HELIX 43 43 SER D 182 SER D 203 1 22 HELIX 44 44 ALA D 230 SER D 235 1 6 SHEET 1 A 6 SER A 3 ARG A 5 0 SHEET 2 A 6 TYR A 47 THR A 53 1 O THR A 53 N PHE A 4 SHEET 3 A 6 THR A 59 ASP A 65 -1 O VAL A 62 N ILE A 50 SHEET 4 A 6 ILE A 71 ALA A 76 -1 O MET A 72 N ALA A 63 SHEET 5 A 6 THR A 79 PHE A 82 -1 O TYR A 81 N TYR A 74 SHEET 6 A 6 ARG A 101 THR A 104 1 O VAL A 103 N SER A 80 SHEET 1 B 2 ASN A 27 LEU A 31 0 SHEET 2 B 2 ILE A 34 LEU A 37 -1 O LEU A 36 N ARG A 29 SHEET 1 C 2 GLN A 208 ILE A 216 0 SHEET 2 C 2 ARG A 222 ASN A 227 -1 O VAL A 223 N LEU A 215 SHEET 1 D 6 VAL B 2 ARG B 5 0 SHEET 2 D 6 TYR B 47 THR B 53 1 O HIS B 51 N VAL B 2 SHEET 3 D 6 THR B 59 ASP B 65 -1 O ILE B 60 N LEU B 52 SHEET 4 D 6 ILE B 71 ALA B 76 -1 O MET B 72 N ALA B 63 SHEET 5 D 6 THR B 79 PHE B 82 -1 O THR B 79 N ALA B 76 SHEET 6 D 6 ARG B 101 THR B 104 1 O VAL B 103 N SER B 80 SHEET 1 E 2 ASN B 27 LEU B 31 0 SHEET 2 E 2 ILE B 34 LEU B 37 -1 O ILE B 34 N LEU B 31 SHEET 1 F 2 GLN B 208 ILE B 216 0 SHEET 2 F 2 ARG B 222 ASN B 227 -1 O ILE B 225 N VAL B 213 SHEET 1 G 6 SER C 3 ARG C 5 0 SHEET 2 G 6 TYR C 47 THR C 53 1 O HIS C 51 N PHE C 4 SHEET 3 G 6 THR C 59 ASP C 65 -1 O VAL C 62 N ILE C 50 SHEET 4 G 6 ILE C 71 ALA C 76 -1 O MET C 72 N ALA C 63 SHEET 5 G 6 THR C 79 PHE C 83 -1 O THR C 79 N ALA C 76 SHEET 6 G 6 ARG C 101 LEU C 105 1 O LEU C 105 N PHE C 82 SHEET 1 H 2 ASN C 27 LEU C 31 0 SHEET 2 H 2 ILE C 34 LEU C 37 -1 O LEU C 36 N ARG C 29 SHEET 1 I 2 GLN C 208 ILE C 216 0 SHEET 2 I 2 ARG C 222 ASN C 227 -1 O VAL C 223 N LEU C 215 SHEET 1 J 6 VAL D 2 ARG D 5 0 SHEET 2 J 6 TYR D 47 THR D 53 1 O HIS D 51 N VAL D 2 SHEET 3 J 6 THR D 59 ASP D 65 -1 O VAL D 62 N ILE D 50 SHEET 4 J 6 ILE D 71 ALA D 76 -1 O MET D 72 N ALA D 63 SHEET 5 J 6 THR D 79 PHE D 82 -1 O THR D 79 N ALA D 76 SHEET 6 J 6 ARG D 101 THR D 104 1 O VAL D 103 N SER D 80 SHEET 1 K 2 ASN D 27 LEU D 31 0 SHEET 2 K 2 ILE D 34 LEU D 37 -1 O LEU D 36 N ARG D 29 SHEET 1 L 2 GLN D 208 ILE D 216 0 SHEET 2 L 2 ARG D 222 ASN D 227 -1 O ILE D 225 N VAL D 213 LINK CA CA A1202 O HOH A1332 1555 1555 2.29 LINK CA CA A1202 O HOH A1335 1555 1555 2.55 LINK CA CA A1202 O HOH A1343 1555 1555 2.30 LINK CA CA A1202 O HOH A1346 1555 1555 2.67 LINK CA CA A1202 O HOH A1379 1555 1555 2.54 LINK CA CA B1201 O HOH B1232 1555 1555 2.37 LINK CA CA B1201 O HOH B1252 1555 1555 2.38 LINK CA CA B1201 O HOH B1301 1555 1555 2.52 LINK CA CA B1201 O HOH B1307 1555 1555 2.45 LINK CA CA B1201 O HOH B1316 1555 1555 3.06 LINK CA CA C1204 O HOH C1277 1555 1555 2.49 LINK CA CA C1204 O HOH C1372 1555 1555 2.41 LINK CA CA D1203 O HOH D1225 1555 1555 2.42 LINK CA CA D1203 O HOH D1339 1555 1555 2.34 LINK CA CA D1203 O HOH D1345 1555 1555 2.66 LINK CA CA D1203 O HOH D1362 1555 1555 2.64 SITE 1 AC1 5 HOH B1232 HOH B1252 HOH B1301 HOH B1307 SITE 2 AC1 5 HOH B1316 SITE 1 AC2 5 HOH A1332 HOH A1335 HOH A1343 HOH A1346 SITE 2 AC2 5 HOH A1379 SITE 1 AC3 4 HOH D1225 HOH D1339 HOH D1345 HOH D1362 SITE 1 AC4 3 LEU C 240 HOH C1277 HOH C1372 CRYST1 71.560 74.400 87.560 90.00 96.96 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013974 0.000000 0.001706 0.00000 SCALE2 0.000000 0.013441 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011506 0.00000