PDB Short entry for 1J7M
HEADER    HYDROLASE                               17-MAY-01   1J7M              
TITLE     THE THIRD FIBRONECTIN TYPE II MODULE FROM HUMAN MATRIX                
TITLE    2 METALLOPROTEINASE 2                                                  
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: MATRIX METALLOPROTEINASE 2;                                
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: THIRD FIBRONECTIN TYPE II MODULE;                          
COMPND   5 SYNONYM: 72 KDA TYPE IV COLLAGENASE, GELATINASE A;                   
COMPND   6 EC: 3.4.24.24;                                                       
COMPND   7 ENGINEERED: YES;                                                     
COMPND   8 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   8 EXPRESSION_SYSTEM_PLASMID: PMED23                                    
KEYWDS    BETA SHEET, ALPHA HELIX, HYDROLASE                                    
EXPDTA    SOLUTION NMR                                                          
NUMMDL    50                                                                    
AUTHOR    K.BRIKNAROVA,M.GEHRMANN,L.BANYAI,H.TORDAI,L.PATTHY,M.LLINAS           
REVDAT   5   23-FEB-22 1J7M    1       REMARK SEQADV                            
REVDAT   4   24-FEB-09 1J7M    1       VERSN                                    
REVDAT   3   01-APR-03 1J7M    1       JRNL                                     
REVDAT   2   22-AUG-01 1J7M    1       JRNL                                     
REVDAT   1   30-MAY-01 1J7M    0                                                
JRNL        AUTH   K.BRIKNAROVA,M.GEHRMANN,L.BANYAI,H.TORDAI,L.PATTHY,M.LLINAS  
JRNL        TITL   GELATIN-BINDING REGION OF HUMAN MATRIX METALLOPROTEINASE-2:  
JRNL        TITL 2 SOLUTION STRUCTURE, DYNAMICS, AND FUNCTION OF THE COL-23     
JRNL        TITL 3 TWO-DOMAIN CONSTRUCT.                                        
JRNL        REF    J.BIOL.CHEM.                  V. 276 27613 2001              
JRNL        REFN                   ISSN 0021-9258                               
JRNL        PMID   11320090                                                     
JRNL        DOI    10.1074/JBC.M101105200                                       
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : XWINNMR 2.0, X-PLOR 3.851                            
REMARK   3   AUTHORS     : BRUKER, GERMANY (XWINNMR), BRUNGER (X-PLOR)          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1J7M COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAY-01.                  
REMARK 100 THE DEPOSITION ID IS D_1000013460.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298                                
REMARK 210  PH                             : 5.4                                
REMARK 210  IONIC STRENGTH                 : 0                                  
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 0.5MM COL-3 NA; 90% H2O, 10%       
REMARK 210                                   D2O; 0.5MM COL-3 NA; D2O; 1MM      
REMARK 210                                   COL-3 U-15N; 90% H2O, 10% D2O      
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D COSY; 2D TOCSY; 2D NOESY        
REMARK 210  SPECTROMETER FIELD STRENGTH    : 500 MHZ                            
REMARK 210  SPECTROMETER MODEL             : AVANCE                             
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : FELIX 95, X-PLOR 3.851             
REMARK 210   METHOD USED                   : DISTANCE GEOMETRY AND SIMULATED    
REMARK 210                                   ANNEALING                          
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 50                                 
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 50                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : NULL                               
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;                   
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                            
REMARK 465   MODELS 1-50                                                        
REMARK 465     RES C SSSEQI                                                     
REMARK 465     LEU A    -7                                                      
REMARK 465     ALA A    -6                                                      
REMARK 465     ALA A    -5                                                      
REMARK 465     HIS A    -4                                                      
REMARK 465     PRO A    -3                                                      
REMARK 465     PRO A    -2                                                      
REMARK 465     PHE A    -1                                                      
REMARK 465     ALA A     0                                                      
REMARK 465     TRP A    61                                                      
REMARK 465     ILE A    62                                                      
REMARK 465     SER A    63                                                      
REMARK 465     SER A    64                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   HE2  TYR A    47     HB3  TRP A    53              1.08            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 ASN A   9       17.24   -156.22                                   
REMARK 500  1 ASP A  36      -79.84   -103.32                                   
REMARK 500  1 ASP A  49      -64.18    -90.88                                   
REMARK 500  1 PRO A  57     -149.63    -71.88                                   
REMARK 500  2 VAL A   6     -168.04   -113.15                                   
REMARK 500  2 LEU A  22       44.06     35.63                                   
REMARK 500  2 ARG A  34      -78.59   -112.04                                   
REMARK 500  3 SER A   4     -150.64     46.36                                   
REMARK 500  3 VAL A   6     -165.17   -114.21                                   
REMARK 500  3 ASN A   9      -21.22   -148.24                                   
REMARK 500  3 LEU A  22       33.92     39.46                                   
REMARK 500  3 ARG A  34      -72.92   -106.70                                   
REMARK 500  3 PRO A  57     -146.00    -63.65                                   
REMARK 500  4 TRP A   2       60.14   -106.39                                   
REMARK 500  4 VAL A   6     -167.26   -117.89                                   
REMARK 500  4 ASN A   9       34.63   -161.80                                   
REMARK 500  4 LEU A  22       47.18     34.68                                   
REMARK 500  4 ARG A  34      -81.33   -110.44                                   
REMARK 500  4 PRO A  57     -150.86    -70.40                                   
REMARK 500  5 SER A   4     -159.88     63.71                                   
REMARK 500  5 ASN A   9       31.93   -153.16                                   
REMARK 500  5 PHE A  19     -169.66   -103.09                                   
REMARK 500  5 SER A  35      -59.50     78.53                                   
REMARK 500  5 ASP A  36     -106.13   -127.00                                   
REMARK 500  5 LYS A  38      145.64     66.67                                   
REMARK 500  5 PRO A  57     -146.56    -71.12                                   
REMARK 500  6 TRP A   2     -145.68     62.48                                   
REMARK 500  6 ASN A   9      -30.87   -131.73                                   
REMARK 500  6 LEU A  22       36.88     39.24                                   
REMARK 500  6 ASP A  36      -79.18   -104.92                                   
REMARK 500  6 ASP A  58       66.71     29.18                                   
REMARK 500  6 GLN A  59      -68.82   -122.88                                   
REMARK 500  7 TRP A   2      -88.86    -76.54                                   
REMARK 500  7 PHE A  19     -168.02   -101.93                                   
REMARK 500  7 ARG A  34      -78.67   -100.84                                   
REMARK 500  7 ASP A  49      -70.60    -87.48                                   
REMARK 500  7 PRO A  57        4.97    -69.77                                   
REMARK 500  8 TRP A   2     -109.51   -114.59                                   
REMARK 500  8 VAL A   6     -164.96   -116.50                                   
REMARK 500  8 ASN A   9       31.61   -158.75                                   
REMARK 500  8 LEU A  22       45.45     33.28                                   
REMARK 500  8 ARG A  34      -64.71   -108.04                                   
REMARK 500  8 ASP A  36      -84.32   -101.72                                   
REMARK 500  8 PRO A  57        2.59    -65.63                                   
REMARK 500  8 GLN A  59       47.63    -99.68                                   
REMARK 500  9 VAL A   6      -50.10   -124.57                                   
REMARK 500  9 LEU A  22       45.60    -52.93                                   
REMARK 500  9 ASP A  36      -83.75    -94.60                                   
REMARK 500  9 ASP A  49      -67.88    -91.29                                   
REMARK 500  9 PRO A  57     -142.01    -73.61                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     289 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500  9 PHE A  21         0.08    SIDE CHAIN                              
REMARK 500 40 PHE A  21         0.07    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1CXW   RELATED DB: PDB                                   
REMARK 900 1CXW IS THE SECOND TYPE II MODULE FROM HUMAN MATRIX                  
REMARK 900 METALLOPROTEINASE 2                                                  
DBREF  1J7M A    3    60  UNP    P08253   MMP2_HUMAN     337    394             
SEQADV 1J7M LEU A   -7  UNP  P08253              CLONING ARTIFACT               
SEQADV 1J7M ALA A   -6  UNP  P08253              CLONING ARTIFACT               
SEQADV 1J7M ALA A   -5  UNP  P08253              CLONING ARTIFACT               
SEQADV 1J7M HIS A   -4  UNP  P08253              CLONING ARTIFACT               
SEQADV 1J7M PRO A   -3  UNP  P08253              CLONING ARTIFACT               
SEQADV 1J7M PRO A   -2  UNP  P08253              CLONING ARTIFACT               
SEQADV 1J7M PHE A   -1  UNP  P08253              CLONING ARTIFACT               
SEQADV 1J7M ALA A    0  UNP  P08253              CLONING ARTIFACT               
SEQADV 1J7M SER A    1  UNP  P08253              CLONING ARTIFACT               
SEQADV 1J7M TRP A    2  UNP  P08253              CLONING ARTIFACT               
SEQADV 1J7M GLY A   11  UNP  P08253    GLU   345 SEE REMARK 999                 
SEQADV 1J7M TRP A   61  UNP  P08253              CLONING ARTIFACT               
SEQADV 1J7M ILE A   62  UNP  P08253              CLONING ARTIFACT               
SEQADV 1J7M SER A   63  UNP  P08253              CLONING ARTIFACT               
SEQADV 1J7M SER A   64  UNP  P08253              CLONING ARTIFACT               
SEQRES   1 A   72  LEU ALA ALA HIS PRO PRO PHE ALA SER TRP MET SER THR          
SEQRES   2 A   72  VAL GLY GLY ASN SER GLY GLY ALA PRO CYS VAL PHE PRO          
SEQRES   3 A   72  PHE THR PHE LEU GLY ASN LYS TYR GLU SER CYS THR SER          
SEQRES   4 A   72  ALA GLY ARG SER ASP GLY LYS MET TRP CYS ALA THR THR          
SEQRES   5 A   72  ALA ASN TYR ASP ASP ASP ARG LYS TRP GLY PHE CYS PRO          
SEQRES   6 A   72  ASP GLN GLY TRP ILE SER SER                                  
HELIX    1   1 ASN A   46  ARG A   51  1                                   6    
SHEET    1   A 2 PHE A  19  PHE A  21  0                                        
SHEET    2   A 2 ASN A  24  TYR A  26 -1  N  ASN A  24   O  PHE A  21           
SHEET    1   B 2 TRP A  40  ALA A  42  0                                        
SHEET    2   B 2 TRP A  53  PHE A  55 -1  O  GLY A  54   N  CYS A  41           
SSBOND   1 CYS A   15    CYS A   41                          1555   1555  2.03  
SSBOND   2 CYS A   29    CYS A   56                          1555   1555  2.03  
CISPEP   1 PHE A   17    PRO A   18          1        -0.29                     
CISPEP   2 PHE A   17    PRO A   18          2        -0.80                     
CISPEP   3 PHE A   17    PRO A   18          3        -0.53                     
CISPEP   4 PHE A   17    PRO A   18          4        -0.68                     
CISPEP   5 PHE A   17    PRO A   18          5        -0.88                     
CISPEP   6 PHE A   17    PRO A   18          6        -0.38                     
CISPEP   7 PHE A   17    PRO A   18          7        -0.44                     
CISPEP   8 PHE A   17    PRO A   18          8        -0.65                     
CISPEP   9 PHE A   17    PRO A   18          9        -0.47                     
CISPEP  10 PHE A   17    PRO A   18         10        -0.94                     
CISPEP  11 PHE A   17    PRO A   18         11        -1.28                     
CISPEP  12 PHE A   17    PRO A   18         12        -0.22                     
CISPEP  13 PHE A   17    PRO A   18         13        -0.60                     
CISPEP  14 PHE A   17    PRO A   18         14        -0.26                     
CISPEP  15 PHE A   17    PRO A   18         15        -0.55                     
CISPEP  16 PHE A   17    PRO A   18         16        -0.32                     
CISPEP  17 PHE A   17    PRO A   18         17        -0.47                     
CISPEP  18 PHE A   17    PRO A   18         18        -0.81                     
CISPEP  19 PHE A   17    PRO A   18         19        -0.02                     
CISPEP  20 PHE A   17    PRO A   18         20        -0.68                     
CISPEP  21 PHE A   17    PRO A   18         21        -0.76                     
CISPEP  22 PHE A   17    PRO A   18         22        -0.75                     
CISPEP  23 PHE A   17    PRO A   18         23        -0.33                     
CISPEP  24 PHE A   17    PRO A   18         24        -0.48                     
CISPEP  25 PHE A   17    PRO A   18         25        -0.37                     
CISPEP  26 PHE A   17    PRO A   18         26        -0.64                     
CISPEP  27 PHE A   17    PRO A   18         27        -0.36                     
CISPEP  28 PHE A   17    PRO A   18         28        -0.59                     
CISPEP  29 PHE A   17    PRO A   18         29        -0.17                     
CISPEP  30 PHE A   17    PRO A   18         30        -0.33                     
CISPEP  31 PHE A   17    PRO A   18         31        -0.45                     
CISPEP  32 PHE A   17    PRO A   18         32        -0.50                     
CISPEP  33 PHE A   17    PRO A   18         33        -0.24                     
CISPEP  34 PHE A   17    PRO A   18         34        -0.78                     
CISPEP  35 PHE A   17    PRO A   18         35        -0.55                     
CISPEP  36 PHE A   17    PRO A   18         36         0.15                     
CISPEP  37 PHE A   17    PRO A   18         37        -0.16                     
CISPEP  38 PHE A   17    PRO A   18         38        -0.17                     
CISPEP  39 PHE A   17    PRO A   18         39        -0.74                     
CISPEP  40 PHE A   17    PRO A   18         40        -0.51                     
CISPEP  41 PHE A   17    PRO A   18         41        -0.15                     
CISPEP  42 PHE A   17    PRO A   18         42        -0.49                     
CISPEP  43 PHE A   17    PRO A   18         43        -0.46                     
CISPEP  44 PHE A   17    PRO A   18         44        -0.13                     
CISPEP  45 PHE A   17    PRO A   18         45        -0.17                     
CISPEP  46 PHE A   17    PRO A   18         46        -0.82                     
CISPEP  47 PHE A   17    PRO A   18         47        -0.33                     
CISPEP  48 PHE A   17    PRO A   18         48        -0.97                     
CISPEP  49 PHE A   17    PRO A   18         49        -0.18                     
CISPEP  50 PHE A   17    PRO A   18         50        -0.81                     
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000