PDB Short entry for 1JWS
HEADER    IMMUNE SYSTEM                           05-SEP-01   1JWS              
TITLE     CRYSTAL STRUCTURE OF THE COMPLEX OF THE MHC CLASS II MOLECULE HLA-DR1 
TITLE    2 (HA PEPTIDE 306-318) WITH THE SUPERANTIGEN SEC3 VARIANT 3B1          
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN;   
COMPND   3 CHAIN: A;                                                            
COMPND   4 ENGINEERED: YES;                                                     
COMPND   5 MOL_ID: 2;                                                           
COMPND   6 MOLECULE: HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR-1 BETA CHAIN;  
COMPND   7 CHAIN: B;                                                            
COMPND   8 ENGINEERED: YES;                                                     
COMPND   9 MOL_ID: 3;                                                           
COMPND  10 MOLECULE: HA PEPTIDE;                                                
COMPND  11 CHAIN: C;                                                            
COMPND  12 ENGINEERED: YES;                                                     
COMPND  13 MOL_ID: 4;                                                           
COMPND  14 MOLECULE: ENTEROTOXIN TYPE C-3;                                      
COMPND  15 CHAIN: D;                                                            
COMPND  16 SYNONYM: SEC3;                                                       
COMPND  17 ENGINEERED: YES;                                                     
COMPND  18 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   7 MOL_ID: 2;                                                           
SOURCE   8 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   9 ORGANISM_COMMON: HUMAN;                                              
SOURCE  10 ORGANISM_TAXID: 9606;                                                
SOURCE  11 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE  12 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE  13 MOL_ID: 3;                                                           
SOURCE  14 SYNTHETIC: YES;                                                      
SOURCE  15 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED;               
SOURCE  16 MOL_ID: 4;                                                           
SOURCE  17 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS;                          
SOURCE  18 ORGANISM_TAXID: 1280;                                                
SOURCE  19 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE  20 EXPRESSION_SYSTEM_TAXID: 562                                         
KEYWDS    HLA-DR1 ALPHA SUBUNIT, HLA-DR1 BETA SUBUNIT, MUTATION, IMMUNE SYSTEM  
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    E.J.SUNDBERG,P.S.ANDERSEN,P.M.SCHLIEVERT,K.KARJALAINEN,R.A.MARIUZZA   
REVDAT   4   27-OCT-21 1JWS    1       SEQADV                                   
REVDAT   3   24-FEB-09 1JWS    1       VERSN                                    
REVDAT   2   30-SEP-03 1JWS    1       AUTHOR JRNL                              
REVDAT   1   08-JUL-03 1JWS    0                                                
JRNL        AUTH   E.J.SUNDBERG,P.S.ANDERSEN,P.M.SCHLIEVERT,K.KARJALAINEN,      
JRNL        AUTH 2 R.A.MARIUZZA                                                 
JRNL        TITL   STRUCTURAL, ENERGETIC, AND FUNCTIONAL ANALYSIS OF A          
JRNL        TITL 2 PROTEIN-PROTEIN INTERFACE AT DISTINCT STAGES OF AFFINITY     
JRNL        TITL 3 MATURATION                                                   
JRNL        REF    STRUCTURE                     V.  11  1151 2003              
JRNL        REFN                   ISSN 0969-2126                               
JRNL        PMID   12962633                                                     
JRNL        DOI    10.1016/S0969-2126(03)00187-4                                
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.60 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS 1.0                                              
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : NULL                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 14.99                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 2.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : 265913.110                     
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : 0.0000                         
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 83.7                           
REMARK   3   NUMBER OF REFLECTIONS             : 33543                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE            (WORKING SET) : 0.195                           
REMARK   3   FREE R VALUE                     : 0.232                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.000                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1669                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : 0.006                           
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 6                            
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.60                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.76                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 59.10                        
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : 3749                         
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2450                       
REMARK   3   BIN FREE R VALUE                    : 0.2740                       
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : 5.40                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : 215                          
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : 0.019                        
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 5007                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 0                                       
REMARK   3   SOLVENT ATOMS            : 141                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 23.30                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 45.50                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 3.21000                                              
REMARK   3    B22 (A**2) : 3.21000                                              
REMARK   3    B33 (A**2) : -6.42000                                             
REMARK   3    B12 (A**2) : 8.33000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : 0.30                            
REMARK   3   ESD FROM SIGMAA              (A) : 0.30                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : 5.00                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : 0.37                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : 0.37                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.008                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.400                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : 25.40                           
REMARK   3   IMPROPER ANGLES        (DEGREES) : 0.760                           
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : RESTRAINED                                
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : FLAT MODEL                                           
REMARK   3   KSOL        : 0.33                                                 
REMARK   3   BSOL        : 30.19                                                
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : PROTEIN_REP.PARAM                              
REMARK   3  PARAMETER FILE  2  : WATER_REP.PARAM                                
REMARK   3  PARAMETER FILE  3  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : PROTEIN.TOP                                    
REMARK   3  TOPOLOGY FILE  2   : NULL                                           
REMARK   3  TOPOLOGY FILE  3   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1JWS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-SEP-01.                  
REMARK 100 THE DEPOSITION ID IS D_1000014275.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 18-MAR-00                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 4.6                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 19-ID                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.008                              
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 4                     
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO                              
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 40189                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.600                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 20.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.8                               
REMARK 200  DATA REDUNDANCY                : NULL                               
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : 0.07100                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 21.3000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.69                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 100.0                              
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : 0.04950                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.600                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: AMORE                                                 
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 73.60                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.66                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, SODIUM ACETATE, ETHYLENE       
REMARK 280  GLYCOL, PH 4.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K     
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3                              
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z                                                
REMARK 290       3555   -X+Y,-X,Z                                               
REMARK 290       4555   X+2/3,Y+1/3,Z+1/3                                       
REMARK 290       5555   -Y+2/3,X-Y+1/3,Z+1/3                                    
REMARK 290       6555   -X+Y+2/3,-X+1/3,Z+1/3                                   
REMARK 290       7555   X+1/3,Y+2/3,Z+2/3                                       
REMARK 290       8555   -Y+1/3,X-Y+2/3,Z+2/3                                    
REMARK 290       9555   -X+Y+1/3,-X+2/3,Z+2/3                                   
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       85.19750            
REMARK 290   SMTRY2   4  0.000000  1.000000  0.000000       49.18880            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       40.27067            
REMARK 290   SMTRY1   5 -0.500000 -0.866025  0.000000       85.19750            
REMARK 290   SMTRY2   5  0.866025 -0.500000  0.000000       49.18880            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       40.27067            
REMARK 290   SMTRY1   6 -0.500000  0.866025  0.000000       85.19750            
REMARK 290   SMTRY2   6 -0.866025 -0.500000  0.000000       49.18880            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       40.27067            
REMARK 290   SMTRY1   7  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   7  0.000000  1.000000  0.000000       98.37760            
REMARK 290   SMTRY3   7  0.000000  0.000000  1.000000       80.54133            
REMARK 290   SMTRY1   8 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   8  0.866025 -0.500000  0.000000       98.37760            
REMARK 290   SMTRY3   8  0.000000  0.000000  1.000000       80.54133            
REMARK 290   SMTRY1   9 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   9 -0.866025 -0.500000  0.000000       98.37760            
REMARK 290   SMTRY3   9  0.000000  0.000000  1.000000       80.54133            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D                            
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     ILE A     1                                                      
REMARK 465     LYS A     2                                                      
REMARK 465     PRO B   108                                                      
REMARK 465     LEU B   109                                                      
REMARK 465     GLN B   110                                                      
REMARK 465     ASP D    99                                                      
REMARK 465     ASN D   100                                                      
REMARK 465     VAL D   101                                                      
REMARK 465     GLY D   102                                                      
REMARK 465     LYS D   103                                                      
REMARK 465     VAL D   104                                                      
REMARK 465     THR D   105                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     GLU D   1    CG   CD   OE1  OE2                                  
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    LEU B     8     O    TYR B    32              2.16            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    LEU A  99      136.71    -31.92                                   
REMARK 500    ARG A 100       -1.36     56.36                                   
REMARK 500    LYS A 111       64.50     35.99                                   
REMARK 500    THR A 113      146.56   -178.68                                   
REMARK 500    ASN A 124       71.20     53.20                                   
REMARK 500    LYS A 147      145.71   -177.25                                   
REMARK 500    TYR B  32      -88.69    -76.03                                   
REMARK 500    ASN B  33      -68.39    -94.55                                   
REMARK 500    ASP B  76      -68.03    -99.67                                   
REMARK 500    TYR B  78      -68.26   -105.90                                   
REMARK 500    THR B  90      -70.42   -122.56                                   
REMARK 500    LYS B 105       39.27    -94.10                                   
REMARK 500    THR B 106      -91.54   -139.81                                   
REMARK 500    PRO B 124     -174.09    -67.65                                   
REMARK 500    GLU B 137      153.68    -27.75                                   
REMARK 500    LYS D  37       76.76     51.59                                   
REMARK 500    MET D  44      -71.16    -95.70                                   
REMARK 500    LYS D  57      -90.52    -46.15                                   
REMARK 500    PHE D  95      156.76    175.51                                   
REMARK 500    SER D  97      127.89     79.02                                   
REMARK 500    ASP D 124       70.69    -54.15                                   
REMARK 500    ASN D 125      -12.68    163.62                                   
REMARK 500    LYS D 139       -0.72     67.21                                   
REMARK 500    LYS D 171       13.74   -154.97                                   
REMARK 500    SER D 178      174.93     66.20                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1JWM   RELATED DB: PDB                                   
REMARK 900 1JWM CONTAINS COMPLEX OF THE MHC CLASS II MOLECULE HLA-DR1 (HA       
REMARK 900 PEPTIDE 306-318) WITH THE SUPERANTIGEN SEC3                          
REMARK 900 RELATED ID: 1JWU   RELATED DB: PDB                                   
REMARK 900 1JWU CONTAINS K43S, F44F, L45F, A46K, H47W MUTATIONS IN SEC3         
DBREF  1JWS A    1   182  UNP    P01903   2DRA_HUMAN      26    207             
DBREF  1JWS B    1   190  UNP    P04229   2B11_HUMAN      30    219             
DBREF  1JWS D    1   239  UNP    P0A0L5   ENTC3_STAAU     28    266             
DBREF  1JWS C  306   318  PDB    1JWS     1JWS           306    318             
SEQADV 1JWS GLY D   43  UNP  P0A0L5    LYS    70 ENGINEERED MUTATION            
SEQADV 1JWS MET D   44  UNP  P0A0L5    PHE    71 ENGINEERED MUTATION            
SEQADV 1JWS PHE D   45  UNP  P0A0L5    LEU    72 ENGINEERED MUTATION            
SEQADV 1JWS ASN D   46  UNP  P0A0L5    ALA    73 ENGINEERED MUTATION            
SEQADV 1JWS TRP D   47  UNP  P0A0L5    HIS    74 ENGINEERED MUTATION            
SEQRES   1 A  182  ILE LYS GLU GLU HIS VAL ILE ILE GLN ALA GLU PHE TYR          
SEQRES   2 A  182  LEU ASN PRO ASP GLN SER GLY GLU PHE MET PHE ASP PHE          
SEQRES   3 A  182  ASP GLY ASP GLU ILE PHE HIS VAL ASP MET ALA LYS LYS          
SEQRES   4 A  182  GLU THR VAL TRP ARG LEU GLU GLU PHE GLY ARG PHE ALA          
SEQRES   5 A  182  SER PHE GLU ALA GLN GLY ALA LEU ALA ASN ILE ALA VAL          
SEQRES   6 A  182  ASP LYS ALA ASN LEU GLU ILE MET THR LYS ARG SER ASN          
SEQRES   7 A  182  TYR THR PRO ILE THR ASN VAL PRO PRO GLU VAL THR VAL          
SEQRES   8 A  182  LEU THR ASN SER PRO VAL GLU LEU ARG GLU PRO ASN VAL          
SEQRES   9 A  182  LEU ILE CYS PHE ILE ASP LYS PHE THR PRO PRO VAL VAL          
SEQRES  10 A  182  ASN VAL THR TRP LEU ARG ASN GLY LYS PRO VAL THR THR          
SEQRES  11 A  182  GLY VAL SER GLU THR VAL PHE LEU PRO ARG GLU ASP HIS          
SEQRES  12 A  182  LEU PHE ARG LYS PHE HIS TYR LEU PRO PHE LEU PRO SER          
SEQRES  13 A  182  THR GLU ASP VAL TYR ASP CYS ARG VAL GLU HIS TRP GLY          
SEQRES  14 A  182  LEU ASP GLU PRO LEU LEU LYS HIS TRP GLU PHE ASP ALA          
SEQRES   1 B  190  GLY ASP THR ARG PRO ARG PHE LEU TRP GLN LEU LYS PHE          
SEQRES   2 B  190  GLU CYS HIS PHE PHE ASN GLY THR GLU ARG VAL ARG LEU          
SEQRES   3 B  190  LEU GLU ARG CYS ILE TYR ASN GLN GLU GLU SER VAL ARG          
SEQRES   4 B  190  PHE ASP SER ASP VAL GLY GLU TYR ARG ALA VAL THR GLU          
SEQRES   5 B  190  LEU GLY ARG PRO ASP ALA GLU TYR TRP ASN SER GLN LYS          
SEQRES   6 B  190  ASP LEU LEU GLU GLN ARG ARG ALA ALA VAL ASP THR TYR          
SEQRES   7 B  190  CYS ARG HIS ASN TYR GLY VAL GLY GLU SER PHE THR VAL          
SEQRES   8 B  190  GLN ARG ARG VAL GLU PRO LYS VAL THR VAL TYR PRO SER          
SEQRES   9 B  190  LYS THR GLN PRO LEU GLN HIS HIS ASN LEU LEU VAL CYS          
SEQRES  10 B  190  SER VAL SER GLY PHE TYR PRO GLY SER ILE GLU VAL ARG          
SEQRES  11 B  190  TRP PHE ARG ASN GLY GLN GLU GLU LYS ALA GLY VAL VAL          
SEQRES  12 B  190  SER THR GLY LEU ILE GLN ASN GLY ASP TRP THR PHE GLN          
SEQRES  13 B  190  THR LEU VAL MET LEU GLU THR VAL PRO ARG SER GLY GLU          
SEQRES  14 B  190  VAL TYR THR CYS GLN VAL GLU HIS PRO SER VAL THR SER          
SEQRES  15 B  190  PRO LEU THR VAL GLU TRP ARG ALA                              
SEQRES   1 C   13  PRO LYS TYR VAL LYS GLN ASN THR LEU LYS LEU ALA THR          
SEQRES   1 D  239  GLU SER GLN PRO ASP PRO MET PRO ASP ASP LEU HIS LYS          
SEQRES   2 D  239  SER SER GLU PHE THR GLY THR MET GLY ASN MET LYS TYR          
SEQRES   3 D  239  LEU TYR ASP ASP HIS TYR VAL SER ALA THR LYS VAL LYS          
SEQRES   4 D  239  SER VAL ASP GLY MET PHE ASN TRP ASP LEU ILE TYR ASN          
SEQRES   5 D  239  ILE SER ASP LYS LYS LEU LYS ASN TYR ASP LYS VAL LYS          
SEQRES   6 D  239  THR GLU LEU LEU ASN GLU ASP LEU ALA LYS LYS TYR LYS          
SEQRES   7 D  239  ASP GLU VAL VAL ASP VAL TYR GLY SER ASN TYR TYR VAL          
SEQRES   8 D  239  ASN CYS TYR PHE SER SER LYS ASP ASN VAL GLY LYS VAL          
SEQRES   9 D  239  THR GLY GLY LYS THR CYS MET TYR GLY GLY ILE THR LYS          
SEQRES  10 D  239  HIS GLU GLY ASN HIS PHE ASP ASN GLY ASN LEU GLN ASN          
SEQRES  11 D  239  VAL LEU VAL ARG VAL TYR GLU ASN LYS ARG ASN THR ILE          
SEQRES  12 D  239  SER PHE GLU VAL GLN THR ASP LYS LYS SER VAL THR ALA          
SEQRES  13 D  239  GLN GLU LEU ASP ILE LYS ALA ARG ASN PHE LEU ILE ASN          
SEQRES  14 D  239  LYS LYS ASN LEU TYR GLU PHE ASN SER SER PRO TYR GLU          
SEQRES  15 D  239  THR GLY TYR ILE LYS PHE ILE GLU ASN ASN GLY ASN THR          
SEQRES  16 D  239  PHE TRP TYR ASP MET MET PRO ALA PRO GLY ASP LYS PHE          
SEQRES  17 D  239  ASP GLN SER LYS TYR LEU MET MET TYR ASN ASP ASN LYS          
SEQRES  18 D  239  THR VAL ASP SER LYS SER VAL LYS ILE GLU VAL HIS LEU          
SEQRES  19 D  239  THR THR LYS ASN GLY                                          
FORMUL   5  HOH   *141(H2 O)                                                    
HELIX    1   1 LEU A   45  PHE A   51  5                                   7    
HELIX    2   2 GLU A   55  GLN A   57  5                                   3    
HELIX    3   3 GLY A   58  SER A   77  1                                  20    
HELIX    4   4 THR B   51  LEU B   53  5                                   3    
HELIX    5   5 GLY B   54  ASN B   62  1                                   9    
HELIX    6   6 GLN B   64  ALA B   73  1                                  10    
HELIX    7   7 ALA B   73  TYR B   78  1                                   6    
HELIX    8   8 TYR B   78  GLY B   86  1                                   9    
HELIX    9   9 MET D    7  LEU D   11  5                                   5    
HELIX   10  10 LYS D   13  PHE D   17  5                                   5    
HELIX   11  11 MET D   21  LEU D   27  1                                   7    
HELIX   12  12 ASN D   70  ASP D   79  1                                  10    
HELIX   13  13 ALA D  156  ASN D  172  1                                  17    
HELIX   14  14 ASP D  209  MET D  215  1                                   7    
HELIX   15  15 MET D  216  ASN D  220  5                                   5    
SHEET    1   A 8 GLU A  40  TRP A  43  0                                        
SHEET    2   A 8 ASP A  29  ASP A  35 -1  N  HIS A  33   O  VAL A  42           
SHEET    3   A 8 SER A  19  PHE A  26 -1  N  PHE A  26   O  ASP A  29           
SHEET    4   A 8 HIS A   5  ASN A  15 -1  N  ALA A  10   O  MET A  23           
SHEET    5   A 8 PHE B   7  PHE B  18 -1  O  CYS B  15   N  ILE A   7           
SHEET    6   A 8 ARG B  23  ILE B  31 -1  O  ARG B  29   N  LYS B  12           
SHEET    7   A 8 GLU B  36  ASP B  41 -1  O  PHE B  40   N  GLU B  28           
SHEET    8   A 8 TYR B  47  ALA B  49 -1  O  ARG B  48   N  ARG B  39           
SHEET    1   B 4 GLU A  88  THR A  93  0                                        
SHEET    2   B 4 ASN A 103  PHE A 112 -1  O  ILE A 106   N  LEU A  92           
SHEET    3   B 4 PHE A 145  PHE A 153 -1  O  PHE A 153   N  ASN A 103           
SHEET    4   B 4 SER A 133  GLU A 134 -1  N  SER A 133   O  TYR A 150           
SHEET    1   C 4 GLU A  88  THR A  93  0                                        
SHEET    2   C 4 ASN A 103  PHE A 112 -1  O  ILE A 106   N  LEU A  92           
SHEET    3   C 4 PHE A 145  PHE A 153 -1  O  PHE A 153   N  ASN A 103           
SHEET    4   C 4 LEU A 138  PRO A 139 -1  N  LEU A 138   O  ARG A 146           
SHEET    1   D 3 ASN A 118  ARG A 123  0                                        
SHEET    2   D 3 VAL A 160  GLU A 166 -1  O  ARG A 164   N  THR A 120           
SHEET    3   D 3 LEU A 174  GLU A 179 -1  O  TRP A 178   N  TYR A 161           
SHEET    1   E 4 LYS B  98  PRO B 103  0                                        
SHEET    2   E 4 ASN B 113  PHE B 122 -1  O  SER B 120   N  LYS B  98           
SHEET    3   E 4 PHE B 155  THR B 163 -1  O  THR B 157   N  VAL B 119           
SHEET    4   E 4 VAL B 142  SER B 144 -1  N  VAL B 143   O  MET B 160           
SHEET    1   F 4 LYS B  98  PRO B 103  0                                        
SHEET    2   F 4 ASN B 113  PHE B 122 -1  O  SER B 120   N  LYS B  98           
SHEET    3   F 4 PHE B 155  THR B 163 -1  O  THR B 157   N  VAL B 119           
SHEET    4   F 4 ILE B 148  GLN B 149 -1  N  ILE B 148   O  GLN B 156           
SHEET    1   G 4 GLN B 136  GLU B 137  0                                        
SHEET    2   G 4 GLU B 128  ARG B 133 -1  N  ARG B 133   O  GLN B 136           
SHEET    3   G 4 VAL B 170  GLU B 176 -1  O  GLN B 174   N  ARG B 130           
SHEET    4   G 4 LEU B 184  ARG B 189 -1  O  LEU B 184   N  VAL B 175           
SHEET    1   H 3 VAL D  33  VAL D  38  0                                        
SHEET    2   H 3 VAL D  82  GLY D  86 -1  O  VAL D  82   N  VAL D  38           
SHEET    3   H 3 ILE D 115  LYS D 117 -1  O  THR D 116   N  ASP D  83           
SHEET    1   I 3 ASP D  48  TYR D  51  0                                        
SHEET    2   I 3 LYS D  63  GLU D  67 -1  O  VAL D  64   N  TYR D  51           
SHEET    3   I 3 LYS D 108  TYR D 112  1  O  MET D 111   N  LYS D  65           
SHEET    1   J 5 ARG D 140  THR D 149  0                                        
SHEET    2   J 5 GLN D 129  GLU D 137 -1  N  VAL D 133   O  PHE D 145           
SHEET    3   J 5 LYS D 229  THR D 235  1  O  LEU D 234   N  TYR D 136           
SHEET    4   J 5 THR D 183  ILE D 189 -1  N  LYS D 187   O  GLU D 231           
SHEET    5   J 5 THR D 195  ASP D 199 -1  O  PHE D 196   N  PHE D 188           
SHEET    1   K 2 SER D 153  THR D 155  0                                        
SHEET    2   K 2 THR D 222  ASP D 224 -1  O  VAL D 223   N  VAL D 154           
SSBOND   1 CYS A  107    CYS A  163                          1555   1555  2.03  
SSBOND   2 CYS B   15    CYS B   79                          1555   1555  2.04  
SSBOND   3 CYS B  117    CYS B  173                          1555   1555  2.03  
SSBOND   4 CYS D   93    CYS D  110                          1555   1555  2.03  
CISPEP   1 ASN A   15    PRO A   16          0         0.11                     
CISPEP   2 THR A  113    PRO A  114          0         0.65                     
CISPEP   3 TYR B  123    PRO B  124          0        -0.47                     
CRYST1  170.395  170.395  120.812  90.00  90.00 120.00 H 3           9          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.005869  0.003388  0.000000        0.00000                         
SCALE2      0.000000  0.006777  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.008277        0.00000