PDB Short entry for 1KCJ HEADER HYDROLASE 08-NOV-01 1KCJ TITLE MODEL OF (-)-COCAINE-BOUND (-)-COCAINE HYDROLASE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHOLINESTERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: (-)-COCAINE HYDROLASE; COMPND 5 EC: 3.1.1.8; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN KEYWDS HYDROLASE, COCAINE HYDROLASE, DOUBLE MUTANT OF KEYWDS 2 BUTYRYLCHOLINESTERASE EXPDTA THEORETICAL MODEL AUTHOR H.SUN,Y.-P.PANG,O.LOCKRIDGE,S.BRIMIJOIN REVDAT 1 25-DEC-02 1KCJ 0 JRNL AUTH H.SUN,Y.-P.PANG,O.LOCKRIDGE,S.BRIMIJOIN JRNL TITL RE-ENGINEERING BUTYRYLCHOLINESTERASE AS A COCAINE JRNL TITL 2 HYDROLASE JRNL REF MOL.PHARMACOL. V. 62 220 2002 JRNL REFN ASTM MOPMA3 US ISSN 0026-895X REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.SUN,J.EL YAZAL,O.LOCKRIDGE,L.M.SCHOPFER, REMARK 1 AUTH 2 S.BRIMIJOIN,Y.-P.PANG REMARK 1 TITL PREDICTED MICHAELIS-MENTEN COMPLEXES OF REMARK 1 TITL 2 COCAINE-BUTYRYLCHOLINESTERASE. ENGINEERING REMARK 1 TITL 3 EFFECTIVE BUTYRYLCHOLINESTERASE MUTANTS FOR REMARK 1 TITL 4 COCAINE DETOXICATION. REMARK 1 REF J.BIOL.CHEM. V. 276 9330 2001 REMARK 1 REFN ASTM JBCHA3 US ISSN 0021-9258 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER 6.0 REMARK 3 AUTHORS : KOLLMAN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1KCJ COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-DEC-2001. REMARK 100 THE RCSB ID CODE IS RCSB014811. REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: THE COMPLEX STRUCTURE WAS GENERATED BY THE EUDOC REMARK 220 PROGRAM (J. COMP. CHEM. 22, 1750, 2001). REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 481A REMARK 465 GLN A 481B REMARK 465 ASN A 481C REMARK 465 ASN A 481D REMARK 465 SER A 481E REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 440 CD GLU A 440 OE2 0.105 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 3 -50.21 61.92 REMARK 500 PHE A 20 -67.39 57.97 REMARK 500 ASP A 53 -65.92 52.76 REMARK 500 PHE A 117 -73.33 60.00 REMARK 500 SER A 197 -103.92 44.76 REMARK 500 PHE A 297 -58.58 70.20 REMARK 500 VAL A 376 -54.54 69.43 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 501 THR A 502 143.21 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1EHO RELATED DB: PDB REMARK 900 THE ENZYME OF THIS COMPLEX IS THE DOUBLE MUTANT OF REMARK 900 BUTYRYLCHOLINESTERASE IN 1EHO. IN ADDITION, 1EHO CONTAINS REMARK 900 THE SAME COCAINE STEREO ISOMER. DBREF 1KCJ A 1 531 UNP P06276 CHLE_HUMAN 30 560 SEQADV 1KCJ TRP A 327 UNP P06276 ALA 356 ENGINEERED SEQADV 1KCJ ALA A 331 UNP P06276 TYR 360 ENGINEERED SEQRES 1 A 531 ASP ASP ILE ILE ILE ALA THR LYS ASN GLY LYS VAL ARG SEQRES 2 A 531 GLY MET ASN LEU THR VAL PHE GLY GLY THR VAL THR ALA SEQRES 3 A 531 PHE LEU GLY ILE PRO TYR ALA GLN PRO PRO LEU GLY ARG SEQRES 4 A 531 LEU ARG PHE LYS LYS PRO GLN SER LEU THR LYS TRP SER SEQRES 5 A 531 ASP ILE TRP ASN ALA THR LYS TYR ALA ASN SER CYS CYS SEQRES 6 A 531 GLN ASN ILE ASP GLN SER PHE PRO GLY PHE HIS GLY SER SEQRES 7 A 531 GLU MET TRP ASN PRO ASN THR ASP LEU SER GLU ASP CYS SEQRES 8 A 531 LEU TYR LEU ASN VAL TRP ILE PRO ALA PRO LYS PRO LYS SEQRES 9 A 531 ASN ALA THR VAL LEU ILE TRP ILE TYR GLY GLY GLY PHE SEQRES 10 A 531 GLN THR GLY THR SER SER LEU HIS VAL TYR ASP GLY LYS SEQRES 11 A 531 PHE LEU ALA ARG VAL GLU ARG VAL ILE VAL VAL SER MET SEQRES 12 A 531 ASN TYR ARG VAL GLY ALA LEU GLY PHE LEU ALA LEU PRO SEQRES 13 A 531 GLY ASN PRO GLU ALA PRO GLY ASN MET GLY LEU PHE ASP SEQRES 14 A 531 GLN GLN LEU ALA LEU GLN TRP VAL GLN LYS ASN ILE ALA SEQRES 15 A 531 ALA PHE GLY GLY ASN PRO LYS SER VAL THR LEU PHE GLY SEQRES 16 A 531 GLU SER ALA GLY ALA ALA SER VAL SER LEU HIS LEU LEU SEQRES 17 A 531 SER PRO GLY SER HIS SER LEU PHE THR ARG ALA ILE LEU SEQRES 18 A 531 GLN SER GLY SER PHE ASN ALA PRO TRP ALA VAL THR SER SEQRES 19 A 531 LEU TYR GLU ALA ARG ASN ARG THR LEU ASN LEU ALA LYS SEQRES 20 A 531 LEU THR GLY CYS SER ARG GLU ASN GLU THR GLU ILE ILE SEQRES 21 A 531 LYS CYS LEU ARG ASN LYS ASP PRO GLN GLU ILE LEU LEU SEQRES 22 A 531 ASN GLU ALA PHE VAL VAL PRO TYR GLY THR PRO LEU SER SEQRES 23 A 531 VAL ASN PHE GLY PRO THR VAL ASP GLY ASP PHE LEU THR SEQRES 24 A 531 ASP MET PRO ASP ILE LEU LEU GLU LEU GLY GLN PHE LYS SEQRES 25 A 531 LYS THR GLN ILE LEU VAL GLY VAL ASN LYS ASP GLU GLY SEQRES 26 A 531 THR TRP PHE LEU VAL ALA GLY ALA PRO GLY PHE SER LYS SEQRES 27 A 531 ASP ASN ASN SER ILE ILE THR ARG LYS GLU PHE GLN GLU SEQRES 28 A 531 GLY LEU LYS ILE PHE PHE PRO GLY VAL SER GLU PHE GLY SEQRES 29 A 531 LYS GLU SER ILE LEU PHE HIS TYR THR ASP TRP VAL ASP SEQRES 30 A 531 ASP GLN ARG PRO GLU ASN TYR ARG GLU ALA LEU GLY ASP SEQRES 31 A 531 VAL VAL GLY ASP TYR ASN PHE ILE CYS PRO ALA LEU GLU SEQRES 32 A 531 PHE THR LYS LYS PHE SER GLU TRP GLY ASN ASN ALA PHE SEQRES 33 A 531 PHE TYR TYR PHE GLU HIS ARG SER SER LYS LEU PRO TRP SEQRES 34 A 531 PRO GLU TRP MET GLY VAL MET HIS GLY TYR GLU ILE GLU SEQRES 35 A 531 PHE VAL PHE GLY LEU PRO LEU GLU ARG ARG ASP ASN TYR SEQRES 36 A 531 THR LYS ALA GLU GLU ILE LEU SER ARG SER ILE VAL LYS SEQRES 37 A 531 ARG TRP ALA ASN PHE ALA LYS TYR GLY ASN PRO ASN GLU SEQRES 38 A 531 THR GLN ASN ASN SER THR SER TRP PRO VAL PHE LYS SER SEQRES 39 A 531 THR GLU GLN LYS TYR LEU THR LEU ASN THR GLU SER THR SEQRES 40 A 531 ARG ILE MET THR LYS LEU ARG ALA GLN GLN CYS ARG PHE SEQRES 41 A 531 TRP THR SER PHE PHE PRO LYS VAL LEU GLU MET HET CCA 527 44 HETNAM CCA 2-BENZOYLOXY-8-METHYL-8-AZA-BICYCLO[3.2.1]OCTANE-3- HETNAM 2 CCA CARBOXYLIC ACID METHYL ESTER HETSYN CCA COCAINE FORMUL 2 CCA C17 H22 N O4 1+ HELIX 1 1 PHE A 75 MET A 80 1 6 HELIX 2 2 LEU A 124 ASP A 128 5 5 HELIX 3 3 GLY A 129 GLU A 136 1 8 HELIX 4 4 GLY A 148 PHE A 152 5 5 HELIX 5 5 ASN A 164 GLY A 185 1 22 HELIX 6 6 SER A 197 LEU A 207 1 11 HELIX 7 7 SER A 209 PHE A 216 5 8 HELIX 8 8 SER A 234 GLY A 250 1 17 HELIX 9 9 ASN A 255 LYS A 266 1 12 HELIX 10 10 ASP A 267 VAL A 278 1 12 HELIX 11 11 MET A 301 GLY A 309 1 9 HELIX 12 12 GLY A 325 ALA A 331 1 7 HELIX 13 13 THR A 345 PHE A 357 1 13 HELIX 14 14 SER A 361 THR A 373 1 13 HELIX 15 15 ARG A 380 PHE A 397 1 18 HELIX 16 16 PHE A 397 GLY A 412 1 16 HELIX 17 17 GLU A 440 PHE A 445 1 6 HELIX 18 18 THR A 456 TYR A 476 1 21 HELIX 19 19 ARG A 509 PHE A 519 1 11 HELIX 20 20 PHE A 519 MET A 526 1 8 SHEET 1 A 3 ILE A 4 ALA A 6 0 SHEET 2 A 3 LYS A 11 ARG A 13 -1 O VAL A 12 N ILE A 5 SHEET 3 A 3 ILE A 54 ASN A 56 1 O TRP A 55 N ARG A 13 SHEET 1 B11 MET A 15 THR A 18 0 SHEET 2 B11 THR A 23 PRO A 31 -1 O ALA A 26 N MET A 15 SHEET 3 B11 TYR A 93 ALA A 100 -1 O ILE A 98 N THR A 25 SHEET 4 B11 ILE A 139 MET A 143 -1 O SER A 142 N ASN A 95 SHEET 5 B11 VAL A 108 ILE A 112 1 N TRP A 111 O VAL A 141 SHEET 6 B11 VAL A 191 GLU A 196 1 O PHE A 194 N ILE A 110 SHEET 7 B11 ARG A 218 GLN A 222 1 O ILE A 220 N GLY A 195 SHEET 8 B11 GLN A 315 ASN A 321 1 O LEU A 317 N LEU A 221 SHEET 9 B11 ASN A 414 PHE A 420 1 O PHE A 420 N VAL A 320 SHEET 10 B11 TYR A 494 LEU A 497 1 O LEU A 497 N TYR A 419 SHEET 11 B11 ARG A 503 MET A 505 -1 O ARG A 503 N THR A 496 SSBOND 1 CYS A 64 CYS A 91 SSBOND 2 CYS A 251 CYS A 262 SSBOND 3 CYS A 399 CYS A 513 CISPEP 1 ALA A 100 PRO A 101 0 9.13 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000