PDB Short entry for 1KO7 HEADER TRANSFERASE,HYDROLASE 20-DEC-01 1KO7 TITLE X-RAY STRUCTURE OF THE HPR KINASE/PHOSPHATASE FROM STAPHYLOCOCCUS TITLE 2 XYLOSUS AT 1.95 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HPR KINASE/PHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.1.-, 3.1.3.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS XYLOSUS; SOURCE 3 ORGANISM_TAXID: 1288; SOURCE 4 GENE: HPRK; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) (STRATAGENE); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET11A (NOVAGEN) KEYWDS PROTEIN KINASE, PHOSPHOTRANSFER, PROTEIN PHOSPHATASE, DUAL ACTIVITY, KEYWDS 2 PRODUCT, SUBSTRATE, TRANSFERASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.A.MARQUEZ,S.HASENBEIN,B.KOCH,S.FIEULAINE,S.NESSLER,W.HENGSTENBERG, AUTHOR 2 K.SCHEFFZEK REVDAT 4 16-AUG-23 1KO7 1 REMARK REVDAT 3 11-OCT-17 1KO7 1 REMARK REVDAT 2 24-FEB-09 1KO7 1 VERSN REVDAT 1 03-APR-02 1KO7 0 JRNL AUTH J.A.MARQUEZ,S.HASENBEIN,B.KOCH,S.FIEULAINE,S.NESSLER, JRNL AUTH 2 R.B.RUSSELL,W.HENGSTENBERG,K.SCHEFFZEK JRNL TITL STRUCTURE OF THE FULL-LENGTH HPR KINASE/PHOSPHATASE FROM JRNL TITL 2 STAPHYLOCOCCUS XYLOSUS AT 1.95 A RESOLUTION: MIMICKING THE JRNL TITL 3 PRODUCT/SUBSTRATE OF THE PHOSPHO TRANSFER REACTIONS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 99 3458 2002 JRNL REFN ISSN 0027-8424 JRNL PMID 11904409 JRNL DOI 10.1073/PNAS.052461499 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 64.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 62857 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6286 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.07 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 9345 REMARK 3 BIN R VALUE (WORKING SET) : 0.2370 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 1038 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.008 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4484 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 292 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.11 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.17 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.760 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 46.70 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1KO7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JAN-02. REMARK 100 THE DEPOSITION ID IS D_1000015166. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-FEB-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99867 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) OR REMARK 200 SI(311) REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PRODC REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62908 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 64.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.33800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1JB1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M SODIUM-POTASSIUM PHOSPHATE PH REMARK 280 7.6, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 76.12000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.94790 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 64.89533 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 76.12000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 43.94790 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 64.89533 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 76.12000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 43.94790 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 64.89533 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 76.12000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 43.94790 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 64.89533 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 76.12000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 43.94790 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 64.89533 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 76.12000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 43.94790 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 64.89533 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 87.89580 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 129.79067 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 87.89580 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 129.79067 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 87.89580 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 129.79067 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 87.89580 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 129.79067 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 87.89580 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 129.79067 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 87.89580 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 129.79067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGYCALLY RELEVANT STRUCTURE IS AN HEXAMER FORMED BY REMARK 300 THREE EQUIVALENT DIMERS THAT LAY IN ADJACENT ASYMMETRIC UNITS. REMARK 300 SYMMOP 2, SHIFT -1-1 0 SYMMOP 3, SHIFT 0-1 0 REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -101.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 228.36000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 131.84371 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 263.68741 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -102.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 228.36000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 131.84371 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 263.68741 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 471 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TRP A 233 REMARK 465 HIS A 234 REMARK 465 LYS A 235 REMARK 465 GLU A 236 REMARK 465 LYS A 237 REMARK 465 LEU A 238 REMARK 465 TYR A 239 REMARK 465 ASP A 240 REMARK 465 ARG A 241 REMARK 465 VAL A 242 REMARK 465 GLY A 243 REMARK 465 LEU A 244 REMARK 465 ASN A 245 REMARK 465 ALA A 299 REMARK 465 GLU A 300 REMARK 465 ILE A 301 REMARK 465 LEU A 302 REMARK 465 ARG A 303 REMARK 465 ASN A 304 REMARK 465 GLY A 305 REMARK 465 ASN A 306 REMARK 465 ASN A 307 REMARK 465 GLY A 308 REMARK 465 ASN A 309 REMARK 465 ASN A 310 REMARK 465 GLY A 311 REMARK 465 GLU A 312 REMARK 465 GLU A 313 REMARK 465 LYS A 314 REMARK 465 TRP B 233 REMARK 465 HIS B 234 REMARK 465 LYS B 235 REMARK 465 GLU B 236 REMARK 465 LYS B 237 REMARK 465 LEU B 238 REMARK 465 TYR B 239 REMARK 465 ASP B 240 REMARK 465 ARG B 241 REMARK 465 VAL B 242 REMARK 465 GLY B 243 REMARK 465 LEU B 244 REMARK 465 ASN B 245 REMARK 465 ALA B 299 REMARK 465 GLU B 300 REMARK 465 ILE B 301 REMARK 465 LEU B 302 REMARK 465 ARG B 303 REMARK 465 ASN B 304 REMARK 465 GLY B 305 REMARK 465 ASN B 306 REMARK 465 ASN B 307 REMARK 465 GLY B 308 REMARK 465 ASN B 309 REMARK 465 ASN B 310 REMARK 465 GLY B 311 REMARK 465 GLU B 312 REMARK 465 GLU B 313 REMARK 465 LYS B 314 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CE1 HIS A 136 OD1 ASP A 175 2.07 REMARK 500 ND1 HIS A 136 O ASP A 175 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 477 O HOH A 477 3675 1.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 88 18.57 56.07 REMARK 500 ASP A 175 -61.88 67.61 REMARK 500 SER A 183 49.82 -144.22 REMARK 500 ASP A 185 -1.58 -159.97 REMARK 500 HIS A 197 -1.88 75.63 REMARK 500 LEU A 252 -117.91 54.35 REMARK 500 ARG B 88 28.18 48.22 REMARK 500 ASP B 175 -74.40 64.44 REMARK 500 HIS B 197 -0.13 74.82 REMARK 500 LEU B 252 -122.78 58.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN TWO PHOSPHATE IONS IN THE P-LOOP REGIONS MIMIC THE REMARK 600 SUBSTRATE/PRODUCT STATE OF THE PHOSPHO TRANSFER REACTIONS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 315 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 315 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 316 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 317 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 316 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 317 DBREF 1KO7 A 1 314 UNP Q9S1H5 HPRK_STAXY 1 314 DBREF 1KO7 B 1 314 UNP Q9S1H5 HPRK_STAXY 1 314 SEQRES 1 A 314 MET LEU THR THR LYS SER LEU VAL GLU ARG PHE GLU LEU SEQRES 2 A 314 GLU MET ILE ALA GLY GLU ALA GLY LEU ASN LYS GLN ILE SEQRES 3 A 314 LYS ASN THR ASP ILE SER ARG PRO GLY LEU GLU MET ALA SEQRES 4 A 314 GLY TYR PHE SER HIS TYR ALA SER ASP ARG ILE GLN LEU SEQRES 5 A 314 LEU GLY THR THR GLU LEU SER PHE TYR ASN LEU LEU PRO SEQRES 6 A 314 ASP GLU GLU ARG LYS GLY ARG MET ARG LYS LEU CYS ARG SEQRES 7 A 314 PRO GLU THR PRO ALA ILE ILE VAL THR ARG ASP LEU GLU SEQRES 8 A 314 PRO PRO GLU GLU LEU ILE GLU ALA ALA LYS GLU HIS GLU SEQRES 9 A 314 THR PRO LEU ILE THR SER LYS ILE ALA THR THR GLN LEU SEQRES 10 A 314 MET SER ARG LEU THR THR PHE LEU GLU HIS GLU LEU ALA SEQRES 11 A 314 ARG THR THR SER LEU HIS GLY VAL LEU VAL ASP VAL TYR SEQRES 12 A 314 GLY VAL GLY VAL LEU ILE THR GLY ASP SER GLY ILE GLY SEQRES 13 A 314 LYS SER GLU THR ALA LEU GLU LEU ILE LYS ARG GLY HIS SEQRES 14 A 314 ARG LEU VAL ALA ASP ASP ASN VAL GLU ILE ARG GLU ILE SEQRES 15 A 314 SER LYS ASP GLU LEU ILE GLY ARG ALA PRO LYS LEU ILE SEQRES 16 A 314 GLU HIS LEU LEU GLU ILE ARG GLY LEU GLY ILE ILE ASN SEQRES 17 A 314 VAL MET THR LEU PHE GLY ALA GLY SER ILE LEU THR GLU SEQRES 18 A 314 LYS ARG LEU ARG LEU ASN ILE HIS LEU GLU ASN TRP HIS SEQRES 19 A 314 LYS GLU LYS LEU TYR ASP ARG VAL GLY LEU ASN GLU GLU SEQRES 20 A 314 THR LEU ARG ILE LEU ASP THR GLU ILE THR LYS LYS THR SEQRES 21 A 314 ILE PRO VAL ARG PRO GLY ARG ASN VAL ALA VAL ILE ILE SEQRES 22 A 314 GLU VAL ALA ALA MET ASN TYR ARG LEU ASN ILE MET GLY SEQRES 23 A 314 ILE ASN THR ALA GLU GLU PHE ASN ASP ARG LEU ASN ALA SEQRES 24 A 314 GLU ILE LEU ARG ASN GLY ASN ASN GLY ASN ASN GLY GLU SEQRES 25 A 314 GLU LYS SEQRES 1 B 314 MET LEU THR THR LYS SER LEU VAL GLU ARG PHE GLU LEU SEQRES 2 B 314 GLU MET ILE ALA GLY GLU ALA GLY LEU ASN LYS GLN ILE SEQRES 3 B 314 LYS ASN THR ASP ILE SER ARG PRO GLY LEU GLU MET ALA SEQRES 4 B 314 GLY TYR PHE SER HIS TYR ALA SER ASP ARG ILE GLN LEU SEQRES 5 B 314 LEU GLY THR THR GLU LEU SER PHE TYR ASN LEU LEU PRO SEQRES 6 B 314 ASP GLU GLU ARG LYS GLY ARG MET ARG LYS LEU CYS ARG SEQRES 7 B 314 PRO GLU THR PRO ALA ILE ILE VAL THR ARG ASP LEU GLU SEQRES 8 B 314 PRO PRO GLU GLU LEU ILE GLU ALA ALA LYS GLU HIS GLU SEQRES 9 B 314 THR PRO LEU ILE THR SER LYS ILE ALA THR THR GLN LEU SEQRES 10 B 314 MET SER ARG LEU THR THR PHE LEU GLU HIS GLU LEU ALA SEQRES 11 B 314 ARG THR THR SER LEU HIS GLY VAL LEU VAL ASP VAL TYR SEQRES 12 B 314 GLY VAL GLY VAL LEU ILE THR GLY ASP SER GLY ILE GLY SEQRES 13 B 314 LYS SER GLU THR ALA LEU GLU LEU ILE LYS ARG GLY HIS SEQRES 14 B 314 ARG LEU VAL ALA ASP ASP ASN VAL GLU ILE ARG GLU ILE SEQRES 15 B 314 SER LYS ASP GLU LEU ILE GLY ARG ALA PRO LYS LEU ILE SEQRES 16 B 314 GLU HIS LEU LEU GLU ILE ARG GLY LEU GLY ILE ILE ASN SEQRES 17 B 314 VAL MET THR LEU PHE GLY ALA GLY SER ILE LEU THR GLU SEQRES 18 B 314 LYS ARG LEU ARG LEU ASN ILE HIS LEU GLU ASN TRP HIS SEQRES 19 B 314 LYS GLU LYS LEU TYR ASP ARG VAL GLY LEU ASN GLU GLU SEQRES 20 B 314 THR LEU ARG ILE LEU ASP THR GLU ILE THR LYS LYS THR SEQRES 21 B 314 ILE PRO VAL ARG PRO GLY ARG ASN VAL ALA VAL ILE ILE SEQRES 22 B 314 GLU VAL ALA ALA MET ASN TYR ARG LEU ASN ILE MET GLY SEQRES 23 B 314 ILE ASN THR ALA GLU GLU PHE ASN ASP ARG LEU ASN ALA SEQRES 24 B 314 GLU ILE LEU ARG ASN GLY ASN ASN GLY ASN ASN GLY GLU SEQRES 25 B 314 GLU LYS HET PO4 A 315 5 HET PO4 A 316 5 HET PO4 A 317 5 HET PO4 B 315 5 HET PO4 B 316 5 HET PO4 B 317 5 HETNAM PO4 PHOSPHATE ION FORMUL 3 PO4 6(O4 P 3-) FORMUL 9 HOH *292(H2 O) HELIX 1 1 THR A 3 GLU A 12 1 10 HELIX 2 2 GLY A 18 LEU A 22 5 5 HELIX 3 3 PRO A 34 ALA A 39 1 6 HELIX 4 4 GLY A 54 LEU A 64 1 11 HELIX 5 5 PRO A 65 LYS A 70 1 6 HELIX 6 6 GLY A 71 CYS A 77 1 7 HELIX 7 7 PRO A 93 HIS A 103 1 11 HELIX 8 8 ALA A 113 LEU A 129 1 17 HELIX 9 9 GLY A 156 ARG A 167 1 12 HELIX 10 10 PRO A 192 GLU A 196 5 5 HELIX 11 11 VAL A 209 GLY A 214 1 6 HELIX 12 12 ALA A 215 ILE A 218 5 4 HELIX 13 13 ASN A 268 MET A 285 1 18 HELIX 14 14 ASN A 288 ASN A 298 1 11 HELIX 15 15 THR B 3 GLU B 12 1 10 HELIX 16 16 GLY B 18 LEU B 22 5 5 HELIX 17 17 PRO B 34 ALA B 39 1 6 HELIX 18 18 GLY B 54 ASN B 62 1 9 HELIX 19 19 PRO B 65 LYS B 70 1 6 HELIX 20 20 GLY B 71 CYS B 77 1 7 HELIX 21 21 PRO B 93 HIS B 103 1 11 HELIX 22 22 ALA B 113 LEU B 129 1 17 HELIX 23 23 GLY B 156 ARG B 167 1 12 HELIX 24 24 PRO B 192 GLU B 196 5 5 HELIX 25 25 VAL B 209 GLY B 214 1 6 HELIX 26 26 ALA B 215 ILE B 218 5 4 HELIX 27 27 ASN B 268 MET B 285 1 18 HELIX 28 28 ASN B 288 LEU B 297 1 10 SHEET 1 A 5 GLU A 14 ALA A 17 0 SHEET 2 A 5 LEU A 107 THR A 109 -1 O LEU A 107 N ALA A 17 SHEET 3 A 5 ILE A 84 VAL A 86 1 N VAL A 86 O ILE A 108 SHEET 4 A 5 ILE A 50 LEU A 53 1 N GLN A 51 O ILE A 85 SHEET 5 A 5 ILE A 31 SER A 32 1 N SER A 32 O LEU A 52 SHEET 1 B 4 ARG A 131 HIS A 136 0 SHEET 2 B 4 ASN A 176 GLU A 181 -1 O GLU A 181 N ARG A 131 SHEET 3 B 4 LEU A 187 ARG A 190 -1 O ARG A 190 N GLU A 178 SHEET 4 B 4 GLU A 221 ARG A 223 -1 O LYS A 222 N GLY A 189 SHEET 1 C 6 ARG A 170 ALA A 173 0 SHEET 2 C 6 VAL A 138 VAL A 142 -1 N ASP A 141 O ARG A 170 SHEET 3 C 6 VAL A 145 GLY A 151 -1 O ILE A 149 N VAL A 138 SHEET 4 C 6 LEU A 226 GLU A 231 1 O LEU A 230 N THR A 150 SHEET 5 C 6 THR A 254 PRO A 262 1 O THR A 257 N ASN A 227 SHEET 6 C 6 GLU A 247 ILE A 251 -1 N ILE A 251 O THR A 254 SHEET 1 D 2 LEU A 198 ILE A 201 0 SHEET 2 D 2 GLY A 205 ASN A 208 -1 O GLY A 205 N ILE A 201 SHEET 1 E 5 GLU B 14 ALA B 17 0 SHEET 2 E 5 LEU B 107 THR B 109 -1 O LEU B 107 N ALA B 17 SHEET 3 E 5 ILE B 84 VAL B 86 1 N VAL B 86 O ILE B 108 SHEET 4 E 5 ILE B 50 LEU B 53 1 N GLN B 51 O ILE B 85 SHEET 5 E 5 ILE B 31 SER B 32 1 N SER B 32 O LEU B 52 SHEET 1 F 4 ARG B 131 HIS B 136 0 SHEET 2 F 4 ASN B 176 SER B 183 -1 O ILE B 179 N THR B 133 SHEET 3 F 4 GLU B 186 ARG B 190 -1 O ARG B 190 N GLU B 178 SHEET 4 F 4 GLU B 221 ARG B 223 -1 O LYS B 222 N GLY B 189 SHEET 1 G 6 ARG B 170 ALA B 173 0 SHEET 2 G 6 VAL B 138 VAL B 142 -1 N ASP B 141 O ARG B 170 SHEET 3 G 6 VAL B 145 GLY B 151 -1 O ILE B 149 N VAL B 138 SHEET 4 G 6 LEU B 226 GLU B 231 1 O LEU B 230 N THR B 150 SHEET 5 G 6 THR B 254 PRO B 262 1 O LYS B 259 N HIS B 229 SHEET 6 G 6 GLU B 247 ILE B 251 -1 N ILE B 251 O THR B 254 SHEET 1 H 2 LEU B 198 ILE B 201 0 SHEET 2 H 2 GLY B 205 ASN B 208 -1 O GLY B 205 N ILE B 201 SITE 1 AC1 8 ARG A 33 THR A 55 THR A 56 ARG A 88 SITE 2 AC1 8 THR A 114 HOH A 329 TYR B 45 ARG B 49 SITE 1 AC2 8 ARG A 49 ARG A 250 ARG B 33 THR B 55 SITE 2 AC2 8 THR B 56 ARG B 88 THR B 114 HOH B 319 SITE 1 AC3 8 GLY A 154 ILE A 155 GLY A 156 LYS A 157 SITE 2 AC3 8 SER A 158 GLU A 159 PO4 A 317 HOH A 438 SITE 1 AC4 6 HIS A 136 SER A 153 GLY A 154 LYS A 157 SITE 2 AC4 6 PO4 A 316 HOH A 428 SITE 1 AC5 9 GLY B 154 ILE B 155 GLY B 156 LYS B 157 SITE 2 AC5 9 SER B 158 GLU B 159 ARG B 202 PO4 B 317 SITE 3 AC5 9 HOH B 341 SITE 1 AC6 5 HIS B 136 SER B 153 LYS B 157 ARG B 202 SITE 2 AC6 5 PO4 B 316 CRYST1 152.240 152.240 194.686 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006569 0.003792 0.000000 0.00000 SCALE2 0.000000 0.007585 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005136 0.00000