PDB Short entry for 1KPH HEADER TRANSFERASE 30-DEC-01 1KPH TITLE CRYSTAL STRUCTURE OF MYCOLIC ACID CYCLOPROPANE SYNTHASE CMAA1 TITLE 2 COMPLEXED WITH SAH AND DDDMAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: CYCLOPROPANE FATTY ACID SYNTHASE; CFA SYNTHASE; CYCLOPROPANE COMPND 5 MYCOLIC ACID SYNTHASE; CMAA1; COMPND 6 EC: 2.1.1.79; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: CMAA1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PET; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET30B(CMAA1) KEYWDS MIXED ALPHA BETA FOLD, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, TB STRUCTURAL GENOMICS CONSORTIUM, TBSGC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.-C.HUANG,C.V.SMITH,W.R.JACOBS JR.,M.S.GLICKMAN,J.C.SACCHETTINI,TB AUTHOR 2 STRUCTURAL GENOMICS CONSORTIUM (TBSGC) REVDAT 5 14-FEB-24 1KPH 1 REMARK REVDAT 4 24-FEB-09 1KPH 1 VERSN REVDAT 3 01-FEB-05 1KPH 1 JRNL AUTHOR KEYWDS REMARK REVDAT 2 08-APR-02 1KPH 1 JRNL REVDAT 1 11-JAN-02 1KPH 0 JRNL AUTH C.-C.HUANG,C.V.SMITH,M.S.GLICKMAN,W.R.JACOBS JR., JRNL AUTH 2 J.C.SACCHETTINI JRNL TITL CRYSTAL STRUCTURES OF MYCOLIC ACID CYCLOPROPANE SYNTHASES JRNL TITL 2 FROM MYCOBACTERIUM TUBERCULOSIS JRNL REF J.BIOL.CHEM. V. 277 11559 2002 JRNL REFN ISSN 0021-9258 JRNL PMID 11756461 JRNL DOI 10.1074/JBC.M111698200 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : CNS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 525398.940 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 67419 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 6780 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 10053 REMARK 3 BIN R VALUE (WORKING SET) : 0.1980 REMARK 3 BIN FREE R VALUE : 0.2690 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 1131 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.008 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9059 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 210 REMARK 3 SOLVENT ATOMS : 732 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.16000 REMARK 3 B22 (A**2) : 1.16000 REMARK 3 B33 (A**2) : -2.31000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM SIGMAA (A) : 0.08 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.17 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.740 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.310 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.020 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.920 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.690 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 45.94 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : SAH.PAR REMARK 3 PARAMETER FILE 4 : LIP.PAR REMARK 3 PARAMETER FILE 5 : CO3.PAR REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : SAH.TOP REMARK 3 TOPOLOGY FILE 4 : LIP.TOP REMARK 3 TOPOLOGY FILE 5 : CO3.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1KPH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JAN-02. REMARK 100 THE DEPOSITION ID IS D_1000015197. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : BEND CYLINDRICAL GE(111) REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : BENT CONICAL SI-MIRROR (RH REMARK 200 COATING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68170 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 29.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.13 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.08100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 20.80 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, SODIUM ACETATE, AMMONIUM REMARK 280 ACETATE, SAH, DDDMAB, PH 4.6, EVAPORATION AT 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.43900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 131.15850 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.71950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 ASP A 3 REMARK 465 GLU A 4 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 MET C 1 REMARK 465 PRO C 2 REMARK 465 MET D 1 REMARK 465 PRO D 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 19 113.23 164.28 REMARK 500 PRO A 159 -173.09 -69.78 REMARK 500 PRO A 183 -152.24 -68.80 REMARK 500 MET A 184 -77.70 60.99 REMARK 500 SER A 185 -77.30 47.50 REMARK 500 GLN A 254 -111.52 -126.76 REMARK 500 HIS B 15 -66.38 -95.09 REMARK 500 SER B 19 126.66 166.66 REMARK 500 PRO B 174 15.03 -60.58 REMARK 500 GLU B 179 15.42 -66.75 REMARK 500 MET B 184 47.49 -60.39 REMARK 500 GLN B 254 -103.44 -126.36 REMARK 500 HIS C 15 -61.01 -103.28 REMARK 500 SER C 19 125.55 160.42 REMARK 500 TYR C 33 65.98 -118.71 REMARK 500 GLU C 179 -62.54 -109.49 REMARK 500 ARG C 180 -104.49 -58.29 REMARK 500 LEU C 182 145.80 -18.99 REMARK 500 PRO C 183 -132.95 -60.28 REMARK 500 MET C 184 8.05 55.20 REMARK 500 GLN C 254 -98.71 -122.69 REMARK 500 HIS D 15 -65.32 -100.98 REMARK 500 SER D 19 123.80 159.55 REMARK 500 PRO D 174 -80.64 -53.67 REMARK 500 LYS D 175 -15.14 -48.21 REMARK 500 GLU D 176 -133.35 -116.22 REMARK 500 ILE D 177 -51.26 -16.56 REMARK 500 ARG D 180 38.34 -71.84 REMARK 500 PRO D 183 -147.53 -54.98 REMARK 500 GLN D 254 -98.90 -120.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 SAH A 1900 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO3 A 1902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO3 B 2902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO3 C 3902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO3 D 4902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH A 1900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH B 2900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH C 3900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH D 4900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 10A A 1901 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 10A B 2901 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 10A C 3901 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 10A D 4901 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1KP9 RELATED DB: PDB REMARK 900 RELATED ID: 1KPG RELATED DB: PDB REMARK 900 RELATED ID: 1KPI RELATED DB: PDB REMARK 900 RELATED ID: RV3392C RELATED DB: TARGETDB DBREF 1KPH A 1 287 UNP Q11195 CFA1_MYCTU 1 287 DBREF 1KPH B 1 287 UNP Q11195 CFA1_MYCTU 1 287 DBREF 1KPH C 1 287 UNP Q11195 CFA1_MYCTU 1 287 DBREF 1KPH D 1 287 UNP Q11195 CFA1_MYCTU 1 287 SEQRES 1 A 287 MET PRO ASP GLU LEU LYS PRO HIS PHE ALA ASN VAL GLN SEQRES 2 A 287 ALA HIS TYR ASP LEU SER ASP ASP PHE PHE ARG LEU PHE SEQRES 3 A 287 LEU ASP PRO THR GLN THR TYR SER CYS ALA TYR PHE GLU SEQRES 4 A 287 ARG ASP ASP MET THR LEU GLN GLU ALA GLN ILE ALA LYS SEQRES 5 A 287 ILE ASP LEU ALA LEU GLY LYS LEU GLY LEU GLN PRO GLY SEQRES 6 A 287 MET THR LEU LEU ASP VAL GLY CYS GLY TRP GLY ALA THR SEQRES 7 A 287 MET MET ARG ALA VAL GLU LYS TYR ASP VAL ASN VAL VAL SEQRES 8 A 287 GLY LEU THR LEU SER LYS ASN GLN ALA ASN HIS VAL GLN SEQRES 9 A 287 GLN LEU VAL ALA ASN SER GLU ASN LEU ARG SER LYS ARG SEQRES 10 A 287 VAL LEU LEU ALA GLY TRP GLU GLN PHE ASP GLU PRO VAL SEQRES 11 A 287 ASP ARG ILE VAL SER ILE GLY ALA PHE GLU HIS PHE GLY SEQRES 12 A 287 HIS GLU ARG TYR ASP ALA PHE PHE SER LEU ALA HIS ARG SEQRES 13 A 287 LEU LEU PRO ALA ASP GLY VAL MET LEU LEU HIS THR ILE SEQRES 14 A 287 THR GLY LEU HIS PRO LYS GLU ILE HIS GLU ARG GLY LEU SEQRES 15 A 287 PRO MET SER PHE THR PHE ALA ARG PHE LEU LYS PHE ILE SEQRES 16 A 287 VAL THR GLU ILE PHE PRO GLY GLY ARG LEU PRO SER ILE SEQRES 17 A 287 PRO MET VAL GLN GLU CYS ALA SER ALA ASN GLY PHE THR SEQRES 18 A 287 VAL THR ARG VAL GLN SER LEU GLN PRO HIS TYR ALA LYS SEQRES 19 A 287 THR LEU ASP LEU TRP SER ALA ALA LEU GLN ALA ASN LYS SEQRES 20 A 287 GLY GLN ALA ILE ALA LEU GLN SER GLU GLU VAL TYR GLU SEQRES 21 A 287 ARG TYR MET LYS TYR LEU THR GLY CYS ALA GLU MET PHE SEQRES 22 A 287 ARG ILE GLY TYR ILE ASP VAL ASN GLN PHE THR CYS GLN SEQRES 23 A 287 LYS SEQRES 1 B 287 MET PRO ASP GLU LEU LYS PRO HIS PHE ALA ASN VAL GLN SEQRES 2 B 287 ALA HIS TYR ASP LEU SER ASP ASP PHE PHE ARG LEU PHE SEQRES 3 B 287 LEU ASP PRO THR GLN THR TYR SER CYS ALA TYR PHE GLU SEQRES 4 B 287 ARG ASP ASP MET THR LEU GLN GLU ALA GLN ILE ALA LYS SEQRES 5 B 287 ILE ASP LEU ALA LEU GLY LYS LEU GLY LEU GLN PRO GLY SEQRES 6 B 287 MET THR LEU LEU ASP VAL GLY CYS GLY TRP GLY ALA THR SEQRES 7 B 287 MET MET ARG ALA VAL GLU LYS TYR ASP VAL ASN VAL VAL SEQRES 8 B 287 GLY LEU THR LEU SER LYS ASN GLN ALA ASN HIS VAL GLN SEQRES 9 B 287 GLN LEU VAL ALA ASN SER GLU ASN LEU ARG SER LYS ARG SEQRES 10 B 287 VAL LEU LEU ALA GLY TRP GLU GLN PHE ASP GLU PRO VAL SEQRES 11 B 287 ASP ARG ILE VAL SER ILE GLY ALA PHE GLU HIS PHE GLY SEQRES 12 B 287 HIS GLU ARG TYR ASP ALA PHE PHE SER LEU ALA HIS ARG SEQRES 13 B 287 LEU LEU PRO ALA ASP GLY VAL MET LEU LEU HIS THR ILE SEQRES 14 B 287 THR GLY LEU HIS PRO LYS GLU ILE HIS GLU ARG GLY LEU SEQRES 15 B 287 PRO MET SER PHE THR PHE ALA ARG PHE LEU LYS PHE ILE SEQRES 16 B 287 VAL THR GLU ILE PHE PRO GLY GLY ARG LEU PRO SER ILE SEQRES 17 B 287 PRO MET VAL GLN GLU CYS ALA SER ALA ASN GLY PHE THR SEQRES 18 B 287 VAL THR ARG VAL GLN SER LEU GLN PRO HIS TYR ALA LYS SEQRES 19 B 287 THR LEU ASP LEU TRP SER ALA ALA LEU GLN ALA ASN LYS SEQRES 20 B 287 GLY GLN ALA ILE ALA LEU GLN SER GLU GLU VAL TYR GLU SEQRES 21 B 287 ARG TYR MET LYS TYR LEU THR GLY CYS ALA GLU MET PHE SEQRES 22 B 287 ARG ILE GLY TYR ILE ASP VAL ASN GLN PHE THR CYS GLN SEQRES 23 B 287 LYS SEQRES 1 C 287 MET PRO ASP GLU LEU LYS PRO HIS PHE ALA ASN VAL GLN SEQRES 2 C 287 ALA HIS TYR ASP LEU SER ASP ASP PHE PHE ARG LEU PHE SEQRES 3 C 287 LEU ASP PRO THR GLN THR TYR SER CYS ALA TYR PHE GLU SEQRES 4 C 287 ARG ASP ASP MET THR LEU GLN GLU ALA GLN ILE ALA LYS SEQRES 5 C 287 ILE ASP LEU ALA LEU GLY LYS LEU GLY LEU GLN PRO GLY SEQRES 6 C 287 MET THR LEU LEU ASP VAL GLY CYS GLY TRP GLY ALA THR SEQRES 7 C 287 MET MET ARG ALA VAL GLU LYS TYR ASP VAL ASN VAL VAL SEQRES 8 C 287 GLY LEU THR LEU SER LYS ASN GLN ALA ASN HIS VAL GLN SEQRES 9 C 287 GLN LEU VAL ALA ASN SER GLU ASN LEU ARG SER LYS ARG SEQRES 10 C 287 VAL LEU LEU ALA GLY TRP GLU GLN PHE ASP GLU PRO VAL SEQRES 11 C 287 ASP ARG ILE VAL SER ILE GLY ALA PHE GLU HIS PHE GLY SEQRES 12 C 287 HIS GLU ARG TYR ASP ALA PHE PHE SER LEU ALA HIS ARG SEQRES 13 C 287 LEU LEU PRO ALA ASP GLY VAL MET LEU LEU HIS THR ILE SEQRES 14 C 287 THR GLY LEU HIS PRO LYS GLU ILE HIS GLU ARG GLY LEU SEQRES 15 C 287 PRO MET SER PHE THR PHE ALA ARG PHE LEU LYS PHE ILE SEQRES 16 C 287 VAL THR GLU ILE PHE PRO GLY GLY ARG LEU PRO SER ILE SEQRES 17 C 287 PRO MET VAL GLN GLU CYS ALA SER ALA ASN GLY PHE THR SEQRES 18 C 287 VAL THR ARG VAL GLN SER LEU GLN PRO HIS TYR ALA LYS SEQRES 19 C 287 THR LEU ASP LEU TRP SER ALA ALA LEU GLN ALA ASN LYS SEQRES 20 C 287 GLY GLN ALA ILE ALA LEU GLN SER GLU GLU VAL TYR GLU SEQRES 21 C 287 ARG TYR MET LYS TYR LEU THR GLY CYS ALA GLU MET PHE SEQRES 22 C 287 ARG ILE GLY TYR ILE ASP VAL ASN GLN PHE THR CYS GLN SEQRES 23 C 287 LYS SEQRES 1 D 287 MET PRO ASP GLU LEU LYS PRO HIS PHE ALA ASN VAL GLN SEQRES 2 D 287 ALA HIS TYR ASP LEU SER ASP ASP PHE PHE ARG LEU PHE SEQRES 3 D 287 LEU ASP PRO THR GLN THR TYR SER CYS ALA TYR PHE GLU SEQRES 4 D 287 ARG ASP ASP MET THR LEU GLN GLU ALA GLN ILE ALA LYS SEQRES 5 D 287 ILE ASP LEU ALA LEU GLY LYS LEU GLY LEU GLN PRO GLY SEQRES 6 D 287 MET THR LEU LEU ASP VAL GLY CYS GLY TRP GLY ALA THR SEQRES 7 D 287 MET MET ARG ALA VAL GLU LYS TYR ASP VAL ASN VAL VAL SEQRES 8 D 287 GLY LEU THR LEU SER LYS ASN GLN ALA ASN HIS VAL GLN SEQRES 9 D 287 GLN LEU VAL ALA ASN SER GLU ASN LEU ARG SER LYS ARG SEQRES 10 D 287 VAL LEU LEU ALA GLY TRP GLU GLN PHE ASP GLU PRO VAL SEQRES 11 D 287 ASP ARG ILE VAL SER ILE GLY ALA PHE GLU HIS PHE GLY SEQRES 12 D 287 HIS GLU ARG TYR ASP ALA PHE PHE SER LEU ALA HIS ARG SEQRES 13 D 287 LEU LEU PRO ALA ASP GLY VAL MET LEU LEU HIS THR ILE SEQRES 14 D 287 THR GLY LEU HIS PRO LYS GLU ILE HIS GLU ARG GLY LEU SEQRES 15 D 287 PRO MET SER PHE THR PHE ALA ARG PHE LEU LYS PHE ILE SEQRES 16 D 287 VAL THR GLU ILE PHE PRO GLY GLY ARG LEU PRO SER ILE SEQRES 17 D 287 PRO MET VAL GLN GLU CYS ALA SER ALA ASN GLY PHE THR SEQRES 18 D 287 VAL THR ARG VAL GLN SER LEU GLN PRO HIS TYR ALA LYS SEQRES 19 D 287 THR LEU ASP LEU TRP SER ALA ALA LEU GLN ALA ASN LYS SEQRES 20 D 287 GLY GLN ALA ILE ALA LEU GLN SER GLU GLU VAL TYR GLU SEQRES 21 D 287 ARG TYR MET LYS TYR LEU THR GLY CYS ALA GLU MET PHE SEQRES 22 D 287 ARG ILE GLY TYR ILE ASP VAL ASN GLN PHE THR CYS GLN SEQRES 23 D 287 LYS HET CO3 A1902 4 HET SAH A1900 24 HET 10A A1901 23 HET CO3 B2902 4 HET SAH B2900 26 HET 10A B2901 23 HET CO3 C3902 4 HET SAH C3900 26 HET 10A C3901 23 HET CO3 D4902 4 HET SAH D4900 26 HET 10A D4901 23 HETNAM CO3 CARBONATE ION HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM 10A DIDECYL-DIMETHYL-AMMONIUM FORMUL 5 CO3 4(C O3 2-) FORMUL 6 SAH 4(C14 H20 N6 O5 S) FORMUL 7 10A 4(C22 H48 N 1+) FORMUL 17 HOH *732(H2 O) HELIX 1 1 HIS A 8 ASP A 17 1 10 HELIX 2 2 SER A 19 ARG A 24 1 6 HELIX 3 3 THR A 44 GLY A 58 1 15 HELIX 4 4 GLY A 76 ASP A 87 1 12 HELIX 5 5 SER A 96 SER A 110 1 15 HELIX 6 6 GLY A 122 PHE A 126 5 5 HELIX 7 7 ALA A 138 PHE A 142 5 5 HELIX 8 8 GLY A 143 GLU A 145 5 3 HELIX 9 9 ARG A 146 LEU A 158 1 13 HELIX 10 10 HIS A 173 HIS A 178 1 6 HELIX 11 11 GLU A 179 GLY A 181 5 3 HELIX 12 12 SER A 185 ILE A 199 1 15 HELIX 13 13 SER A 207 ASN A 218 1 12 HELIX 14 14 LEU A 228 ASN A 246 1 19 HELIX 15 15 ASN A 246 GLN A 254 1 9 HELIX 16 16 SER A 255 ILE A 275 1 21 HELIX 17 17 HIS B 8 ASP B 17 1 10 HELIX 18 18 SER B 19 ARG B 24 1 6 HELIX 19 19 THR B 44 GLY B 58 1 15 HELIX 20 20 GLY B 76 ASP B 87 1 12 HELIX 21 21 SER B 96 SER B 110 1 15 HELIX 22 22 GLY B 122 PHE B 126 5 5 HELIX 23 23 ALA B 138 GLY B 143 1 6 HELIX 24 24 ARG B 146 LEU B 158 1 13 HELIX 25 25 ILE B 177 GLY B 181 5 5 HELIX 26 26 MET B 184 ILE B 199 1 16 HELIX 27 27 SER B 207 ASN B 218 1 12 HELIX 28 28 LEU B 228 ASN B 246 1 19 HELIX 29 29 ASN B 246 GLN B 254 1 9 HELIX 30 30 SER B 255 GLY B 276 1 22 HELIX 31 31 HIS C 8 ASP C 17 1 10 HELIX 32 32 SER C 19 ARG C 24 1 6 HELIX 33 33 THR C 44 GLY C 58 1 15 HELIX 34 34 GLY C 76 ASP C 87 1 12 HELIX 35 35 SER C 96 SER C 110 1 15 HELIX 36 36 GLY C 122 PHE C 126 5 5 HELIX 37 37 ALA C 138 PHE C 142 5 5 HELIX 38 38 GLY C 143 GLU C 145 5 3 HELIX 39 39 ARG C 146 LEU C 158 1 13 HELIX 40 40 HIS C 173 HIS C 178 1 6 HELIX 41 41 MET C 184 ILE C 199 1 16 HELIX 42 42 SER C 207 ASN C 218 1 12 HELIX 43 43 LEU C 228 ASN C 246 1 19 HELIX 44 44 ASN C 246 GLN C 254 1 9 HELIX 45 45 SER C 255 ILE C 275 1 21 HELIX 46 46 HIS D 8 ASP D 17 1 10 HELIX 47 47 SER D 19 ARG D 24 1 6 HELIX 48 48 THR D 44 GLY D 58 1 15 HELIX 49 49 GLY D 76 ASP D 87 1 12 HELIX 50 50 SER D 96 SER D 110 1 15 HELIX 51 51 GLY D 122 PHE D 126 5 5 HELIX 52 52 ALA D 138 GLY D 143 1 6 HELIX 53 53 ARG D 146 LEU D 158 1 13 HELIX 54 54 SER D 185 ILE D 199 1 15 HELIX 55 55 SER D 207 ALA D 217 1 11 HELIX 56 56 LEU D 228 ASN D 246 1 19 HELIX 57 57 ASN D 246 GLN D 254 1 9 HELIX 58 58 SER D 255 ILE D 275 1 21 SHEET 1 A 7 LYS A 116 LEU A 119 0 SHEET 2 A 7 ASN A 89 LEU A 93 1 N GLY A 92 O ARG A 117 SHEET 3 A 7 THR A 67 VAL A 71 1 N ASP A 70 O VAL A 91 SHEET 4 A 7 ARG A 132 ILE A 136 1 O VAL A 134 N LEU A 69 SHEET 5 A 7 VAL A 163 GLY A 171 1 O HIS A 167 N SER A 135 SHEET 6 A 7 ILE A 278 GLN A 286 -1 O PHE A 283 N LEU A 166 SHEET 7 A 7 THR A 221 VAL A 222 -1 N THR A 221 O GLN A 286 SHEET 1 B 7 LYS A 116 LEU A 119 0 SHEET 2 B 7 ASN A 89 LEU A 93 1 N GLY A 92 O ARG A 117 SHEET 3 B 7 THR A 67 VAL A 71 1 N ASP A 70 O VAL A 91 SHEET 4 B 7 ARG A 132 ILE A 136 1 O VAL A 134 N LEU A 69 SHEET 5 B 7 VAL A 163 GLY A 171 1 O HIS A 167 N SER A 135 SHEET 6 B 7 ILE A 278 GLN A 286 -1 O PHE A 283 N LEU A 166 SHEET 7 B 7 GLN A 226 SER A 227 -1 N GLN A 226 O GLN A 282 SHEET 1 C 7 LYS B 116 LEU B 120 0 SHEET 2 C 7 ASN B 89 THR B 94 1 N GLY B 92 O ARG B 117 SHEET 3 C 7 THR B 67 VAL B 71 1 N LEU B 68 O ASN B 89 SHEET 4 C 7 ARG B 132 ILE B 136 1 O VAL B 134 N LEU B 69 SHEET 5 C 7 VAL B 163 GLY B 171 1 O HIS B 167 N SER B 135 SHEET 6 C 7 ILE B 278 GLN B 286 -1 O PHE B 283 N LEU B 166 SHEET 7 C 7 THR B 221 SER B 227 -1 N THR B 221 O GLN B 286 SHEET 1 D 7 LYS C 116 LEU C 120 0 SHEET 2 D 7 ASN C 89 THR C 94 1 N GLY C 92 O LEU C 119 SHEET 3 D 7 THR C 67 VAL C 71 1 N ASP C 70 O VAL C 91 SHEET 4 D 7 ARG C 132 ILE C 136 1 O VAL C 134 N LEU C 69 SHEET 5 D 7 VAL C 163 GLY C 171 1 O HIS C 167 N SER C 135 SHEET 6 D 7 ILE C 278 GLN C 286 -1 O PHE C 283 N LEU C 166 SHEET 7 D 7 THR C 221 SER C 227 -1 N ARG C 224 O THR C 284 SHEET 1 E 7 LYS D 116 LEU D 120 0 SHEET 2 E 7 ASN D 89 THR D 94 1 N GLY D 92 O ARG D 117 SHEET 3 E 7 THR D 67 VAL D 71 1 N ASP D 70 O VAL D 91 SHEET 4 E 7 ARG D 132 ILE D 136 1 O VAL D 134 N LEU D 69 SHEET 5 E 7 VAL D 163 GLY D 171 1 O HIS D 167 N SER D 135 SHEET 6 E 7 ILE D 278 GLN D 286 -1 O PHE D 283 N LEU D 166 SHEET 7 E 7 THR D 221 SER D 227 -1 N THR D 221 O GLN D 286 SITE 1 AC1 9 SER A 34 CYS A 35 GLY A 137 GLU A 140 SITE 2 AC1 9 HIS A 167 ILE A 169 TYR A 232 VAL A 280 SITE 3 AC1 9 10A A1901 SITE 1 AC2 8 SER B 34 CYS B 35 GLY B 137 GLU B 140 SITE 2 AC2 8 HIS B 167 ILE B 169 TYR B 232 10A B2901 SITE 1 AC3 9 SER C 34 CYS C 35 GLY C 137 GLU C 140 SITE 2 AC3 9 HIS C 167 ILE C 169 TYR C 232 VAL C 280 SITE 3 AC3 9 10A C3901 SITE 1 AC4 8 SER D 34 CYS D 35 GLY D 137 GLU D 140 SITE 2 AC4 8 HIS D 167 ILE D 169 TYR D 232 10A D4901 SITE 1 AC5 21 VAL A 12 TYR A 16 THR A 32 TYR A 33 SITE 2 AC5 21 SER A 34 GLY A 72 GLY A 74 THR A 94 SITE 3 AC5 21 LEU A 95 GLN A 99 GLY A 122 TRP A 123 SITE 4 AC5 21 GLU A 124 ILE A 136 GLY A 137 ALA A 138 SITE 5 AC5 21 HIS A 141 HOH A1100 HOH A1102 HOH A1238 SITE 6 AC5 21 HOH A1241 SITE 1 AC6 24 VAL B 12 TYR B 16 THR B 32 TYR B 33 SITE 2 AC6 24 SER B 34 GLY B 72 GLY B 74 THR B 94 SITE 3 AC6 24 LEU B 95 GLN B 99 GLY B 122 TRP B 123 SITE 4 AC6 24 GLU B 124 ILE B 136 GLY B 137 ALA B 138 SITE 5 AC6 24 HIS B 141 HOH B1006 HOH B1010 HOH B1039 SITE 6 AC6 24 HOH B1085 HOH B1114 HOH B1356 10A B2901 SITE 1 AC7 23 VAL C 12 TYR C 16 THR C 32 TYR C 33 SITE 2 AC7 23 SER C 34 GLY C 72 GLY C 74 THR C 94 SITE 3 AC7 23 LEU C 95 GLN C 99 GLY C 122 TRP C 123 SITE 4 AC7 23 GLU C 124 ILE C 136 GLY C 137 ALA C 138 SITE 5 AC7 23 HIS C 141 HOH C1012 HOH C1021 HOH C1028 SITE 6 AC7 23 HOH C1111 HOH C1235 10A C3901 SITE 1 AC8 24 VAL D 12 TYR D 16 THR D 32 TYR D 33 SITE 2 AC8 24 SER D 34 GLY D 72 GLY D 74 THR D 94 SITE 3 AC8 24 LEU D 95 GLN D 99 GLY D 122 TRP D 123 SITE 4 AC8 24 GLU D 124 ILE D 136 GLY D 137 ALA D 138 SITE 5 AC8 24 HIS D 141 HOH D1013 HOH D1014 HOH D1082 SITE 6 AC8 24 HOH D1094 HOH D1145 HOH D1252 10A D4901 SITE 1 AC9 14 TYR A 16 TYR A 33 GLY A 137 GLU A 140 SITE 2 AC9 14 ILE A 169 LEU A 192 VAL A 196 GLY A 203 SITE 3 AC9 14 ARG A 204 LEU A 205 TYR A 232 TYR A 265 SITE 4 AC9 14 CYS A 269 CO3 A1902 SITE 1 BC1 15 TYR B 16 TYR B 33 GLY B 137 GLU B 140 SITE 2 BC1 15 ILE B 169 LEU B 192 PHE B 200 GLY B 203 SITE 3 BC1 15 LEU B 205 TYR B 232 TYR B 265 CYS B 269 SITE 4 BC1 15 ILE B 278 SAH B2900 CO3 B2902 SITE 1 BC2 14 TYR C 16 TYR C 33 GLY C 137 GLU C 140 SITE 2 BC2 14 ILE C 169 LEU C 192 PHE C 200 GLY C 203 SITE 3 BC2 14 LEU C 205 TYR C 232 TYR C 265 CYS C 269 SITE 4 BC2 14 SAH C3900 CO3 C3902 SITE 1 BC3 16 TYR D 16 TYR D 33 GLY D 137 GLU D 140 SITE 2 BC3 16 LEU D 192 VAL D 196 PHE D 200 GLY D 203 SITE 3 BC3 16 ARG D 204 LEU D 205 TYR D 232 TYR D 265 SITE 4 BC3 16 CYS D 269 ILE D 278 SAH D4900 CO3 D4902 CRYST1 77.623 77.623 174.878 90.00 90.00 90.00 P 43 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012883 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012883 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005718 0.00000